RNA–Protein interactions for RNA: ENST00000377307.6

ARHGAP39-202, Transcript of Rho GTPase activating protein 39, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGAP39, Length 4,673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-202ENST00000377307 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
ARHGAP39-202ENST00000377307 HSP90AA2PQ14568 343 aaPredicted RBP20.55■□□□□ 0.88
ARHGAP39-202ENST00000377307 HAP1P54257 671 aaPredicted RBP20.53■□□□□ 0.88
ARHGAP39-202ENST00000377307 PNISRQ8TF01 805 aaKnown RBP20.53■□□□□ 0.88
ARHGAP39-202ENST00000377307 TPRNQ4KMQ1 711 aa20.52■□□□□ 0.88
ARHGAP39-202ENST00000377307 IL27Q8NEV9 243 aa20.52■□□□□ 0.88
ARHGAP39-202ENST00000377307 MCCP23508 829 aa20.51■□□□□ 0.87
ARHGAP39-202ENST00000377307 CHAF1AQ13111 956 aaPredicted RBP20.51■□□□□ 0.87
ARHGAP39-202ENST00000377307 COG6Q9Y2V7 657 aa20.51■□□□□ 0.87
ARHGAP39-202ENST00000377307 NBPF8Q3BBV2 869 aa20.51■□□□□ 0.87
ARHGAP39-202ENST00000377307 APAF1O14727 1248 aa20.5■□□□□ 0.87
ARHGAP39-202ENST00000377307 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
ARHGAP39-202ENST00000377307 CALD1Q05682 793 aaKnown RBP20.49■□□□□ 0.87
ARHGAP39-202ENST00000377307 SRPK2P78362 688 aaKnown RBP20.49■□□□□ 0.87
ARHGAP39-202ENST00000377307 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
ARHGAP39-202ENST00000377307 SKOR2Q2VWA4 1001 aaPredicted RBP20.47■□□□□ 0.87
ARHGAP39-202ENST00000377307 EFCAB2Q5VUJ9 269 aa20.47■□□□□ 0.87
ARHGAP39-202ENST00000377307 CHMP5Q9NZZ3 219 aa20.47■□□□□ 0.87
ARHGAP39-202ENST00000377307 CDCA7LQ96GN5 454 aa20.46■□□□□ 0.87
ARHGAP39-202ENST00000377307 ANO8Q9HCE9 1232 aaPredicted RBP20.46■□□□□ 0.87
ARHGAP39-202ENST00000377307 BRPF3Q9ULD4 1205 aa20.46■□□□□ 0.87
ARHGAP39-202ENST00000377307 MAP3K1Q13233 1512 aa20.46■□□□□ 0.87
ARHGAP39-202ENST00000377307 ZRSR1Q15695 479 aaKnown RBP20.45■□□□□ 0.86
ARHGAP39-202ENST00000377307 KIAA2012Q0VF49 1180 aa20.45■□□□□ 0.86
ARHGAP39-202ENST00000377307 ZNF644Q9H582 1327 aaPredicted RBP20.45■□□□□ 0.86
ARHGAP39-202ENST00000377307 RAD54L2Q9Y4B4 1467 aa20.45■□□□□ 0.86
ARHGAP39-202ENST00000377307 CFTRP13569 1480 aa20.45■□□□□ 0.86
ARHGAP39-202ENST00000377307 NAIPQ13075 1403 aa20.44■□□□□ 0.86
ARHGAP39-202ENST00000377307 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
ARHGAP39-202ENST00000377307 ZKSCAN2Q63HK3 967 aa20.43■□□□□ 0.86
ARHGAP39-202ENST00000377307 WASHC2CQ9Y4E1 1318 aa20.43■□□□□ 0.86
ARHGAP39-202ENST00000377307 AAMPQ13685 434 aa20.43■□□□□ 0.86
ARHGAP39-202ENST00000377307 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
ARHGAP39-202ENST00000377307 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
ARHGAP39-202ENST00000377307 BCL2L13Q9BXK5 485 aa20.41■□□□□ 0.86
ARHGAP39-202ENST00000377307 FRAT2O75474 233 aaPredicted RBP20.4■□□□□ 0.86
ARHGAP39-202ENST00000377307 ANKRD50Q9ULJ7 1429 aa20.4■□□□□ 0.86
ARHGAP39-202ENST00000377307 HDGFL2Q7Z4V5 671 aaPredicted RBP20.39■□□□□ 0.85
ARHGAP39-202ENST00000377307 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
ARHGAP39-202ENST00000377307 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.85
ARHGAP39-202ENST00000377307 SAFB2Q14151 953 aaKnown RBP eCLIP20.39■□□□□ 0.85
ARHGAP39-202ENST00000377307 VSIG10Q8N0Z9 540 aa20.39■□□□□ 0.85
ARHGAP39-202ENST00000377307 FOXD4L1Q9NU39 408 aa20.39■□□□□ 0.85
ARHGAP39-202ENST00000377307 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
ARHGAP39-202ENST00000377307 GOLGA6L4A6NEF3 574 aa20.38■□□□□ 0.85
ARHGAP39-202ENST00000377307 DDX49Q9Y6V7 483 aaKnown RBP20.38■□□□□ 0.85
ARHGAP39-202ENST00000377307 APBB1O00213 710 aa20.36■□□□□ 0.85
ARHGAP39-202ENST00000377307 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
ARHGAP39-202ENST00000377307 JPH4Q96JJ6 628 aa20.36■□□□□ 0.85
ARHGAP39-202ENST00000377307 GOLGA6L6A8MZA4 724 aa20.35■□□□□ 0.85
ARHGAP39-202ENST00000377307 KCNJ4P48050 445 aa20.34■□□□□ 0.85
ARHGAP39-202ENST00000377307 NRDCO43847 1150 aa20.34■□□□□ 0.85
ARHGAP39-202ENST00000377307 ST18O60284 1047 aa20.34■□□□□ 0.85
ARHGAP39-202ENST00000377307 DDX19BQ9UMR2 479 aa20.33■□□□□ 0.85
ARHGAP39-202ENST00000377307 KIAA1107Q9UPP5 1409 aa20.33■□□□□ 0.85
ARHGAP39-202ENST00000377307 MRE11P49959 708 aa20.33■□□□□ 0.84
ARHGAP39-202ENST00000377307 C11orf95C9JLR9 678 aaPredicted RBP20.33■□□□□ 0.84
ARHGAP39-202ENST00000377307 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
ARHGAP39-202ENST00000377307 OS9Q13438 667 aaPredicted RBP20.32■□□□□ 0.84
ARHGAP39-202ENST00000377307 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
ARHGAP39-202ENST00000377307 KIF3BO15066 747 aa20.31■□□□□ 0.84
ARHGAP39-202ENST00000377307 C22orf23Q9BZE7 217 aa20.31■□□□□ 0.84
ARHGAP39-202ENST00000377307 SPAG9O60271 1321 aaKnown RBP20.31■□□□□ 0.84
ARHGAP39-202ENST00000377307 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
ARHGAP39-202ENST00000377307 NCOA1Q15788 1441 aa20.3■□□□□ 0.84
ARHGAP39-202ENST00000377307 STAC3Q96MF2 364 aa20.3■□□□□ 0.84
ARHGAP39-202ENST00000377307 STK26Q9P289 416 aa20.29■□□□□ 0.84
ARHGAP39-202ENST00000377307 HMMRO75330 724 aa20.29■□□□□ 0.84
ARHGAP39-202ENST00000377307 ANKRD45Q5TZF3 282 aa20.29■□□□□ 0.84
ARHGAP39-202ENST00000377307 PANK1Q8TE04 598 aa20.29■□□□□ 0.84
ARHGAP39-202ENST00000377307 ARID3AQ99856 593 aa20.29■□□□□ 0.84
ARHGAP39-202ENST00000377307 PDE3AQ14432 1141 aa20.28■□□□□ 0.84
ARHGAP39-202ENST00000377307 DRC7Q8IY82 874 aa20.28■□□□□ 0.84
ARHGAP39-202ENST00000377307 CDK11BP21127 795 aaKnown RBP20.28■□□□□ 0.84
ARHGAP39-202ENST00000377307 GGT6Q6P531 493 aa20.28■□□□□ 0.84
ARHGAP39-202ENST00000377307 RUNDC1Q96C34 613 aa20.28■□□□□ 0.84
ARHGAP39-202ENST00000377307 PHF14O94880 888 aa20.27■□□□□ 0.84
ARHGAP39-202ENST00000377307 KIAA1211Q6ZU35 1233 aa20.27■□□□□ 0.84
ARHGAP39-202ENST00000377307 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.83
ARHGAP39-202ENST00000377307 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
ARHGAP39-202ENST00000377307 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
ARHGAP39-202ENST00000377307 FGD1P98174 961 aa20.26■□□□□ 0.83
ARHGAP39-202ENST00000377307 C14orf37Q86TY3 774 aa20.25■□□□□ 0.83
ARHGAP39-202ENST00000377307 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
ARHGAP39-202ENST00000377307 ZBTB7CA1YPR0 619 aa20.25■□□□□ 0.83
ARHGAP39-202ENST00000377307 SUPT6HQ7KZ85 1726 aaKnown RBP20.24■□□□□ 0.83
ARHGAP39-202ENST00000377307 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
ARHGAP39-202ENST00000377307 TRAK2O60296 914 aa20.24■□□□□ 0.83
ARHGAP39-202ENST00000377307 RTF1Q92541 710 aaKnown RBP20.23■□□□□ 0.83
ARHGAP39-202ENST00000377307 ANKRD30BQ9BXX2 1392 aa20.23■□□□□ 0.83
ARHGAP39-202ENST00000377307 ROCK1Q13464 1354 aa20.22■□□□□ 0.83
ARHGAP39-202ENST00000377307 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.21■□□□□ 0.83
ARHGAP39-202ENST00000377307 PRKCSHP14314 528 aaPredicted RBP20.21■□□□□ 0.83
ARHGAP39-202ENST00000377307 DAPK1P53355 1430 aa20.2■□□□□ 0.82
ARHGAP39-202ENST00000377307 CSPP1Q1MSJ5 1256 aa20.19■□□□□ 0.82
ARHGAP39-202ENST00000377307 NBPF1Q3BBV0 1214 aa20.19■□□□□ 0.82
ARHGAP39-202ENST00000377307 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
ARHGAP39-202ENST00000377307 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
ARHGAP39-202ENST00000377307 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
ARHGAP39-202ENST00000377307 NINLQ9Y2I6 1382 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms