RNA–Protein interactions for RNA: ENST00000376959.6

KCNC3-201, Transcript of potassium voltage-gated channel subfamily C member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNC3, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC3-201ENST00000376959 RAB3GAP2Q9H2M9 1393 aa27.53■■■□□ 2
KCNC3-201ENST00000376959 EIF3AQ14152 1382 aaKnown RBP27.53■■■□□ 2
KCNC3-201ENST00000376959 VPS8Q8N3P4 1428 aa27.52■■■□□ 2
KCNC3-201ENST00000376959 H3BQV1 296 aa27.52■■■□□ 2
KCNC3-201ENST00000376959 TPM1P09493 284 aa27.52■■■□□ 2
KCNC3-201ENST00000376959 IFFO2Q5TF58 517 aa27.52■■■□□ 2
KCNC3-201ENST00000376959 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.52■■■□□ 2
KCNC3-201ENST00000376959 LMOD3Q0VAK6 560 aa27.51■■□□□ 1.99
KCNC3-201ENST00000376959 FOXD1Q16676 465 aa27.51■■□□□ 1.99
KCNC3-201ENST00000376959 SLC4A10Q6U841 1118 aa27.51■■□□□ 1.99
KCNC3-201ENST00000376959 MPHOSPH9Q99550 1183 aa27.51■■□□□ 1.99
KCNC3-201ENST00000376959 FAM13BQ9NYF5 915 aa27.51■■□□□ 1.99
KCNC3-201ENST00000376959 TPD52L1Q16890 204 aaPredicted RBP27.51■■□□□ 1.99
KCNC3-201ENST00000376959 STK26Q9P289 416 aa27.51■■□□□ 1.99
KCNC3-201ENST00000376959 CCDC146Q8IYE0 955 aa27.5■■□□□ 1.99
KCNC3-201ENST00000376959 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
KCNC3-201ENST00000376959 CHMP3Q9Y3E7 222 aa27.49■■□□□ 1.99
KCNC3-201ENST00000376959 TAF7LQ5H9L4 462 aa27.48■■□□□ 1.99
KCNC3-201ENST00000376959 PES1O00541 588 aaKnown RBP27.47■■□□□ 1.99
KCNC3-201ENST00000376959 ZNF592Q92610 1267 aa27.47■■□□□ 1.99
KCNC3-201ENST00000376959 PRM3Q9NNZ6 103 aa27.46■■□□□ 1.99
KCNC3-201ENST00000376959 FAM184AQ8NB25 1140 aa27.46■■□□□ 1.99
KCNC3-201ENST00000376959 ZNF330Q9Y3S2 320 aaPredicted RBP27.45■■□□□ 1.98
KCNC3-201ENST00000376959 FAM43AQ8N2R8 423 aa27.44■■□□□ 1.98
KCNC3-201ENST00000376959 CALRP27797 417 aaKnown RBP27.43■■□□□ 1.98
KCNC3-201ENST00000376959 TPM2P07951 284 aa27.42■■□□□ 1.98
KCNC3-201ENST00000376959 RRP1P56182 461 aaKnown RBP27.42■■□□□ 1.98
KCNC3-201ENST00000376959 CHMP5Q9NZZ3 219 aa27.42■■□□□ 1.98
KCNC3-201ENST00000376959 KIF15Q9NS87 1388 aa27.42■■□□□ 1.98
KCNC3-201ENST00000376959 TERF2IPQ9NYB0 399 aa27.41■■□□□ 1.98
KCNC3-201ENST00000376959 MYBBP1AQ9BQG0 1328 aaKnown RBP27.41■■□□□ 1.98
KCNC3-201ENST00000376959 TOMM22Q9NS69 142 aa27.4■■□□□ 1.98
KCNC3-201ENST00000376959 EXOC6Q8TAG9 804 aa27.4■■□□□ 1.98
KCNC3-201ENST00000376959 CGNL1Q0VF96 1302 aa27.4■■□□□ 1.98
KCNC3-201ENST00000376959 ANKRD45Q5TZF3 282 aa27.39■■□□□ 1.98
KCNC3-201ENST00000376959 BAZ1BQ9UIG0 1483 aaKnown RBP27.39■■□□□ 1.98
KCNC3-201ENST00000376959 CARMIL1Q5VZK9 1371 aa27.39■■□□□ 1.97
KCNC3-201ENST00000376959 NUP155O75694 1391 aa27.38■■□□□ 1.97
KCNC3-201ENST00000376959 RILPL2Q969X0 211 aa27.38■■□□□ 1.97
KCNC3-201ENST00000376959 MARCH6O60337 910 aa27.37■■□□□ 1.97
KCNC3-201ENST00000376959 FOXD4L6Q3SYB3 417 aaPredicted RBP27.37■■□□□ 1.97
KCNC3-201ENST00000376959 FOXD4L3Q6VB84 417 aaPredicted RBP27.37■■□□□ 1.97
KCNC3-201ENST00000376959 FMN1Q68DA7 1419 aa27.36■■□□□ 1.97
KCNC3-201ENST00000376959 IPO7O95373 1038 aaKnown RBP27.36■■□□□ 1.97
KCNC3-201ENST00000376959 ZBED9Q6R2W3 1325 aa27.36■■□□□ 1.97
KCNC3-201ENST00000376959 CSB-PGBD3P0DP91 1061 aa27.36■■□□□ 1.97
KCNC3-201ENST00000376959 KANK4Q5T7N3 995 aaPredicted RBP27.36■■□□□ 1.97
KCNC3-201ENST00000376959 PAK3O75914 559 aaPredicted RBP27.35■■□□□ 1.97
KCNC3-201ENST00000376959 ZKSCAN2Q63HK3 967 aa27.35■■□□□ 1.97
KCNC3-201ENST00000376959 L3MBTL2Q969R5 705 aa27.35■■□□□ 1.97
KCNC3-201ENST00000376959 PATL2C9JE40 543 aaKnown RBP27.35■■□□□ 1.97
KCNC3-201ENST00000376959 HOMER1Q86YM7 354 aa27.34■■□□□ 1.97
KCNC3-201ENST00000376959 REC8O95072 547 aa27.34■■□□□ 1.97
KCNC3-201ENST00000376959 CRBNQ96SW2 442 aa27.34■■□□□ 1.97
KCNC3-201ENST00000376959 NOM1Q5C9Z4 860 aaKnown RBP27.34■■□□□ 1.97
KCNC3-201ENST00000376959 E9PSI1 815 aa27.34■■□□□ 1.97
KCNC3-201ENST00000376959 ARGLU1Q9NWB6 273 aaPredicted RBP27.33■■□□□ 1.97
KCNC3-201ENST00000376959 MTERF4Q7Z6M4 381 aaKnown RBP27.32■■□□□ 1.96
KCNC3-201ENST00000376959 MAP7D2Q96T17 732 aa27.31■■□□□ 1.96
KCNC3-201ENST00000376959 PLIN1O60240 522 aa27.31■■□□□ 1.96
KCNC3-201ENST00000376959 GGT6Q6P531 493 aa27.3■■□□□ 1.96
KCNC3-201ENST00000376959 ANKRD30AQ9BXX3 1397 aa27.3■■□□□ 1.96
KCNC3-201ENST00000376959 TMX4Q9H1E5 349 aaPredicted RBP27.3■■□□□ 1.96
KCNC3-201ENST00000376959 MCTP1Q6DN14 999 aa27.29■■□□□ 1.96
KCNC3-201ENST00000376959 ANKRD20A12PQ8NF67 263 aa27.29■■□□□ 1.96
KCNC3-201ENST00000376959 AKAP17AQ02040 695 aaKnown RBP27.28■■□□□ 1.96
KCNC3-201ENST00000376959 ACBD3Q9H3P7 528 aa27.28■■□□□ 1.96
KCNC3-201ENST00000376959 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
KCNC3-201ENST00000376959 SOGA1O94964 1423 aa27.28■■□□□ 1.96
KCNC3-201ENST00000376959 CPLX2Q6PUV4 134 aaKnown RBP27.27■■□□□ 1.96
KCNC3-201ENST00000376959 RUFY2Q8WXA3 655 aa27.27■■□□□ 1.96
KCNC3-201ENST00000376959 DIAPH3Q9NSV4 1193 aa27.27■■□□□ 1.96
KCNC3-201ENST00000376959 NUCB2P80303 420 aa27.26■■□□□ 1.95
KCNC3-201ENST00000376959 ZKSCAN1P17029 563 aaPredicted RBP27.25■■□□□ 1.95
KCNC3-201ENST00000376959 MLECQ14165 292 aa27.25■■□□□ 1.95
KCNC3-201ENST00000376959 COG6Q9Y2V7 657 aa27.24■■□□□ 1.95
KCNC3-201ENST00000376959 CDR1P51861 262 aa27.24■■□□□ 1.95
KCNC3-201ENST00000376959 RRP7AQ9Y3A4 280 aaKnown RBP27.24■■□□□ 1.95
KCNC3-201ENST00000376959 MNS1Q8NEH6 495 aa27.24■■□□□ 1.95
KCNC3-201ENST00000376959 SYNE3Q6ZMZ3 975 aa27.23■■□□□ 1.95
KCNC3-201ENST00000376959 BICD2Q8TD16 824 aa27.23■■□□□ 1.95
KCNC3-201ENST00000376959 MRE11P49959 708 aa27.23■■□□□ 1.95
KCNC3-201ENST00000376959 BCL2L13Q9BXK5 485 aa27.23■■□□□ 1.95
KCNC3-201ENST00000376959 VPS53Q5VIR6 699 aa27.23■■□□□ 1.95
KCNC3-201ENST00000376959 RRP12Q5JTH9 1297 aaKnown RBP27.23■■□□□ 1.95
KCNC3-201ENST00000376959 AK7Q96M32 723 aa27.23■■□□□ 1.95
KCNC3-201ENST00000376959 PRKRIP1Q9H875 184 aaPredicted RBP27.22■■□□□ 1.95
KCNC3-201ENST00000376959 HOOK1Q9UJC3 728 aaKnown RBP27.22■■□□□ 1.95
KCNC3-201ENST00000376959 PCMTD1Q96MG8 357 aaPredicted RBP27.21■■□□□ 1.95
KCNC3-201ENST00000376959 RUFY1Q96T51 708 aa27.21■■□□□ 1.95
KCNC3-201ENST00000376959 IFT57Q9NWB7 429 aa27.21■■□□□ 1.95
KCNC3-201ENST00000376959 CUX2O14529 1486 aa27.21■■□□□ 1.95
KCNC3-201ENST00000376959 DDX19BQ9UMR2 479 aa27.21■■□□□ 1.95
KCNC3-201ENST00000376959 CCDC47Q96A33 483 aaKnown RBP27.21■■□□□ 1.95
KCNC3-201ENST00000376959 HSP90B2PQ58FF3 399 aa27.2■■□□□ 1.95
KCNC3-201ENST00000376959 TRIM29Q14134 588 aa27.2■■□□□ 1.95
KCNC3-201ENST00000376959 SASS6Q6UVJ0 657 aa27.2■■□□□ 1.94
KCNC3-201ENST00000376959 LRRFIP1Q32MZ4 808 aaKnown RBP27.19■■□□□ 1.94
KCNC3-201ENST00000376959 CCDC39Q9UFE4 941 aa27.19■■□□□ 1.94
KCNC3-201ENST00000376959 NFKBIBQ15653 356 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms