RNA–Protein interactions for RNA: ENST00000376959.6

KCNC3-201, Transcript of potassium voltage-gated channel subfamily C member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNC3, Length 5,447 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC3-201ENST00000376959 ILF3Q12906 894 aaKnown RBP eCLIP21.75■■□□□ 1.075e-16■■■■■ 28.8
KCNC3-201ENST00000376959 AQRO60306 1485 aaKnown RBP eCLIP25.12■■□□□ 1.611e-8■■■■■ 48.1
KCNC3-201ENST00000376959 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.062e-8■■■□□ 16.7
KCNC3-201ENST00000376959 EIF3HO15372 352 aaKnown RBP eCLIP23.71■■□□□ 1.393e-8■■■■□ 19.8
KCNC3-201ENST00000376959 PCBP2Q15366 365 aaKnown RBP eCLIP21.58■■□□□ 1.055e-8■■■■■ 35.8
KCNC3-201ENST00000376959 PTBP1P26599 531 aaKnown RBP eCLIP20.8■□□□□ 0.925e-8■■■□□ 14.7
KCNC3-201ENST00000376959 LSM11P83369 360 aaKnown RBP eCLIP19.9■□□□□ 0.787e-8■■□□□ 11.6
KCNC3-201ENST00000376959 SF3B1O75533 1304 aaKnown RBP eCLIP22.89■■□□□ 1.261e-7■■■■■ 172.3
KCNC3-201ENST00000376959 ZC3H11AO75152 810 aaKnown RBP eCLIP22.94■■□□□ 1.261e-7■■■■□ 24.3
KCNC3-201ENST00000376959 PPIGQ13427 754 aaKnown RBP eCLIP21.44■■□□□ 1.021e-7■□□□□ 8.8
KCNC3-201ENST00000376959 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.06■■□□□ 1.121e-7■■■■■ 31.1
KCNC3-201ENST00000376959 QKIQ96PU8 341 aaKnown RBP eCLIP22.91■■□□□ 1.262e-7■■■■■ 66.4
KCNC3-201ENST00000376959 PCBP1Q15365 356 aaKnown RBP eCLIP22.13■■□□□ 1.133e-7■■■■■ 33.7
KCNC3-201ENST00000376959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.644e-7■■■■□ 23.7
KCNC3-201ENST00000376959 RBFOX2O43251 390 aaKnown RBP eCLIP19.39■□□□□ 0.694e-7■■■■□ 23.2
KCNC3-201ENST00000376959 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.45■■□□□ 1.027e-7■■■□□ 17.3
KCNC3-201ENST00000376959 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.22■■□□□ 1.157e-7■■■■■ 32.2
KCNC3-201ENST00000376959 PUM1Q14671 1186 aaKnown RBP eCLIP21.89■■□□□ 1.098e-7■■■■■ 32.3
KCNC3-201ENST00000376959 GTF2F1P35269 517 aaKnown RBP eCLIP26.04■■□□□ 1.769e-7■■■■■ 41.7
KCNC3-201ENST00000376959 HNRNPKP61978 463 aaKnown RBP eCLIP21.21■□□□□ 0.991e-6■■■■□ 23.9
KCNC3-201ENST00000376959 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.33■■□□□ 1.651e-6■□□□□ 9
KCNC3-201ENST00000376959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.04■□□□□ 0.321e-6■■■■□ 24.3
KCNC3-201ENST00000376959 NIPBLQ6KC79 2804 aaeCLIP11.2□□□□□ -0.622e-6■■■■□ 19.3
KCNC3-201ENST00000376959 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.4■■□□□ 1.022e-6■■□□□ 11.5
KCNC3-201ENST00000376959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.13■■□□□ 1.293e-6■■■■□ 22.4
KCNC3-201ENST00000376959 ZNF622Q969S3 477 aaKnown RBP eCLIP24.74■■□□□ 1.553e-6■□□□□ 10.4
KCNC3-201ENST00000376959 NKRFO15226 690 aaKnown RBP eCLIP22.38■■□□□ 1.176e-6■■□□□ 11.7
KCNC3-201ENST00000376959 SF3B4Q15427 424 aaKnown RBP eCLIP20.78■□□□□ 0.929e-6■■■■□ 20
Retrieved 28 of 28 RNA–protein pairs in 6.6 ms