RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 KANK1Q14678 1352 aa25.33■■□□□ 1.65
HLA-F-218ENST00000376861 ADAMTSL3P82987 1691 aa25.32■■□□□ 1.64
HLA-F-218ENST00000376861 HFM1A2PYH4 1435 aa25.32■■□□□ 1.64
HLA-F-218ENST00000376861 NAIPQ13075 1403 aa25.31■■□□□ 1.64
HLA-F-218ENST00000376861 WASHC2CQ9Y4E1 1318 aa25.31■■□□□ 1.64
HLA-F-218ENST00000376861 MADDQ8WXG6 1647 aa25.31■■□□□ 1.64
HLA-F-218ENST00000376861 KDM4FA0A1W2PPD8 638 aa25.31■■□□□ 1.64
HLA-F-218ENST00000376861 RNF17Q9BXT8 1623 aaKnown RBP25.3■■□□□ 1.64
HLA-F-218ENST00000376861 RIMS1Q86UR5 1692 aaKnown RBP25.28■■□□□ 1.64
HLA-F-218ENST00000376861 CNTLNQ9NXG0 1405 aa25.28■■□□□ 1.64
HLA-F-218ENST00000376861 PLPPR3Q6T4P5 718 aa25.27■■□□□ 1.64
HLA-F-218ENST00000376861 CLTCQ00610 1675 aaKnown RBP25.25■■□□□ 1.63
HLA-F-218ENST00000376861 KDM5DQ9BY66 1539 aa25.24■■□□□ 1.63
HLA-F-218ENST00000376861 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
HLA-F-218ENST00000376861 DEPDC5O75140 1603 aa25.24■■□□□ 1.63
HLA-F-218ENST00000376861 TRIM52Q96A61 297 aa25.23■■□□□ 1.63
HLA-F-218ENST00000376861 FAM135AQ9P2D6 1515 aa25.23■■□□□ 1.63
HLA-F-218ENST00000376861 PRDM15P57071 1507 aaPredicted RBP25.22■■□□□ 1.63
HLA-F-218ENST00000376861 ZC3H13Q5T200 1668 aaKnown RBP25.21■■□□□ 1.63
HLA-F-218ENST00000376861 AEBP2Q6ZN18 517 aaPredicted RBP25.2■■□□□ 1.62
HLA-F-218ENST00000376861 ACIN1Q9UKV3 1341 aaKnown RBP25.2■■□□□ 1.62
HLA-F-218ENST00000376861 MROH1Q8NDA8 1641 aa25.2■■□□□ 1.62
HLA-F-218ENST00000376861 NUP155O75694 1391 aa25.2■■□□□ 1.62
HLA-F-218ENST00000376861 UNC13BO14795 1591 aa25.19■■□□□ 1.62
HLA-F-218ENST00000376861 PTPRMP28827 1452 aa25.19■■□□□ 1.62
HLA-F-218ENST00000376861 MROH2AA6NES4 1674 aa25.18■■□□□ 1.62
HLA-F-218ENST00000376861 CEP152O94986 1710 aa25.18■■□□□ 1.62
HLA-F-218ENST00000376861 ZMYM3Q14202 1370 aa25.17■■□□□ 1.62
HLA-F-218ENST00000376861 ABCC3O15438 1527 aa25.16■■□□□ 1.62
HLA-F-218ENST00000376861 RAB3GAP2Q9H2M9 1393 aa25.14■■□□□ 1.62
HLA-F-218ENST00000376861 CEBPAP49715 358 aaPredicted RBP25.14■■□□□ 1.62
HLA-F-218ENST00000376861 C3P01024 1663 aa25.13■■□□□ 1.61
HLA-F-218ENST00000376861 CAMSAP1Q5T5Y3 1602 aa25.12■■□□□ 1.61
HLA-F-218ENST00000376861 IQGAP3Q86VI3 1631 aa25.1■■□□□ 1.61
HLA-F-218ENST00000376861 VWDEQ8N2E2 1590 aa25.1■■□□□ 1.61
HLA-F-218ENST00000376861 LMTK2Q8IWU2 1503 aa25.07■■□□□ 1.6
HLA-F-218ENST00000376861 TET3O43151 1660 aa25.07■■□□□ 1.6
HLA-F-218ENST00000376861 SLC4A1APQ9BWU0 796 aaKnown RBP25.07■■□□□ 1.6
HLA-F-218ENST00000376861 CFAP65Q6ZU64 1925 aaKnown RBP25.06■■□□□ 1.6
HLA-F-218ENST00000376861 PZPP20742 1482 aa25.06■■□□□ 1.6
HLA-F-218ENST00000376861 HRCP23327 699 aa25.05■■□□□ 1.6
HLA-F-218ENST00000376861 EFCAB6Q5THR3 1501 aa25.03■■□□□ 1.6
HLA-F-218ENST00000376861 ARHGAP31Q2M1Z3 1444 aa25.02■■□□□ 1.6
HLA-F-218ENST00000376861 NPATQ14207 1427 aa25.01■■□□□ 1.59
HLA-F-218ENST00000376861 FBXO31Q5XUX0 539 aaPredicted RBP25.01■■□□□ 1.59
HLA-F-218ENST00000376861 RPRD2Q5VT52 1461 aaKnown RBP25■■□□□ 1.59
HLA-F-218ENST00000376861 SETD1BQ9UPS6 1966 aaKnown RBP24.98■■□□□ 1.59
HLA-F-218ENST00000376861 MPHOSPH9Q99550 1183 aa24.98■■□□□ 1.59
HLA-F-218ENST00000376861 PKD2Q13563 968 aa24.97■■□□□ 1.59
HLA-F-218ENST00000376861 E9PCH4 1651 aa24.97■■□□□ 1.59
HLA-F-218ENST00000376861 PREX1Q8TCU6 1659 aa24.97■■□□□ 1.59
HLA-F-218ENST00000376861 TNRQ92752 1358 aa24.96■■□□□ 1.59
HLA-F-218ENST00000376861 ERVK-7P63135 1459 aa24.95■■□□□ 1.59
HLA-F-218ENST00000376861 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
HLA-F-218ENST00000376861 SPATA31D1Q6ZQQ2 1576 aa24.93■■□□□ 1.58
HLA-F-218ENST00000376861 MYO3AQ8NEV4 1616 aa24.88■■□□□ 1.57
HLA-F-218ENST00000376861 STAG3Q9UJ98 1225 aa24.88■■□□□ 1.57
HLA-F-218ENST00000376861 SPHKAPQ2M3C7 1700 aa24.87■■□□□ 1.57
HLA-F-218ENST00000376861 NOS1P29475 1434 aa24.87■■□□□ 1.57
HLA-F-218ENST00000376861 FOXD1Q16676 465 aa24.86■■□□□ 1.57
HLA-F-218ENST00000376861 SLC52A1Q9NWF4 448 aa24.86■■□□□ 1.57
HLA-F-218ENST00000376861 NLRP1Q9C000 1473 aa24.86■■□□□ 1.57
HLA-F-218ENST00000376861 SYNMO15061 1565 aa24.82■■□□□ 1.56
HLA-F-218ENST00000376861 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
HLA-F-218ENST00000376861 CEP170BQ9Y4F5 1589 aaPredicted RBP24.81■■□□□ 1.56
HLA-F-218ENST00000376861 A2ML1A8K2U0 1454 aa24.8■■□□□ 1.56
HLA-F-218ENST00000376861 IDI1Q13907 227 aa24.8■■□□□ 1.56
HLA-F-218ENST00000376861 CCER1Q8TC90 406 aaPredicted RBP24.79■■□□□ 1.56
HLA-F-218ENST00000376861 ZNF142P52746 1687 aaPredicted RBP24.79■■□□□ 1.56
HLA-F-218ENST00000376861 UGGT1Q9NYU2 1555 aa24.79■■□□□ 1.56
HLA-F-218ENST00000376861 PTPRTO14522 1441 aa24.78■■□□□ 1.56
HLA-F-218ENST00000376861 THEMISQ8N1K5 641 aaPredicted RBP24.78■■□□□ 1.56
HLA-F-218ENST00000376861 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
HLA-F-218ENST00000376861 TRPM2O94759 1503 aa24.77■■□□□ 1.56
HLA-F-218ENST00000376861 PIK3C2BO00750 1634 aa24.76■■□□□ 1.55
HLA-F-218ENST00000376861 DHX57Q6P158 1386 aaKnown RBP24.75■■□□□ 1.55
HLA-F-218ENST00000376861 CCDC144AA2RUR9 1427 aa24.75■■□□□ 1.55
HLA-F-218ENST00000376861 HSPA2P54652 639 aa24.75■■□□□ 1.55
HLA-F-218ENST00000376861 KIF1BO60333 1816 aa24.71■■□□□ 1.55
HLA-F-218ENST00000376861 UBR1Q8IWV7 1749 aa24.71■■□□□ 1.55
HLA-F-218ENST00000376861 CLTCL1P53675 1640 aa24.7■■□□□ 1.55
HLA-F-218ENST00000376861 PLA2R1Q13018 1463 aa24.7■■□□□ 1.54
HLA-F-218ENST00000376861 ADGRB3O60242 1522 aa24.7■■□□□ 1.54
HLA-F-218ENST00000376861 KDM5AP29375 1690 aaKnown RBP24.69■■□□□ 1.54
HLA-F-218ENST00000376861 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
HLA-F-218ENST00000376861 HDGFP51858 240 aaKnown RBP24.66■■□□□ 1.54
HLA-F-218ENST00000376861 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
HLA-F-218ENST00000376861 ANKRD30BQ9BXX2 1392 aa24.66■■□□□ 1.54
HLA-F-218ENST00000376861 CLSPNQ9HAW4 1339 aa24.66■■□□□ 1.54
HLA-F-218ENST00000376861 TMEM131LA2VDJ0 1609 aa24.65■■□□□ 1.54
HLA-F-218ENST00000376861 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
HLA-F-218ENST00000376861 ANKLE2Q86XL3 938 aa24.65■■□□□ 1.54
HLA-F-218ENST00000376861 TMEM2Q9UHN6 1383 aa24.61■■□□□ 1.53
HLA-F-218ENST00000376861 PPP1R15AO75807 674 aaPredicted RBP24.61■■□□□ 1.53
HLA-F-218ENST00000376861 RGL3Q3MIN7 710 aa24.61■■□□□ 1.53
HLA-F-218ENST00000376861 TXNDC2Q86VQ3 553 aa24.61■■□□□ 1.53
HLA-F-218ENST00000376861 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.59■■□□□ 1.53
HLA-F-218ENST00000376861 BCANQ96GW7 911 aa24.57■■□□□ 1.52
HLA-F-218ENST00000376861 NCKAP5LQ9HCH0 1330 aa24.57■■□□□ 1.52
HLA-F-218ENST00000376861 POLR1AO95602 1720 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms