RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TSPOAP1O95153 1857 aa17.9■□□□□ 0.46
CLCN6-206ENST00000376496 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
CLCN6-206ENST00000376496 PLA2R1Q13018 1463 aa17.9■□□□□ 0.46
CLCN6-206ENST00000376496 MAP3K4Q9Y6R4 1608 aa17.89■□□□□ 0.46
CLCN6-206ENST00000376496 RGL3Q3MIN7 710 aa17.89■□□□□ 0.46
CLCN6-206ENST00000376496 MAGI2Q86UL8 1455 aa17.89■□□□□ 0.45
CLCN6-206ENST00000376496 CFAP74Q9C0B2 1584 aa17.88■□□□□ 0.45
CLCN6-206ENST00000376496 DHX29Q7Z478 1369 aaKnown RBP17.88■□□□□ 0.45
CLCN6-206ENST00000376496 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
CLCN6-206ENST00000376496 DIP2BQ9P265 1576 aa17.87■□□□□ 0.45
CLCN6-206ENST00000376496 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
CLCN6-206ENST00000376496 NEO1Q92859 1461 aa17.86■□□□□ 0.45
CLCN6-206ENST00000376496 CCDC144AA2RUR9 1427 aa17.85■□□□□ 0.45
CLCN6-206ENST00000376496 KDM5CP41229 1560 aa17.85■□□□□ 0.45
CLCN6-206ENST00000376496 A2MP01023 1474 aa17.83■□□□□ 0.45
CLCN6-206ENST00000376496 GGT6Q6P531 493 aa17.83■□□□□ 0.45
CLCN6-206ENST00000376496 GLI2P10070 1586 aa17.83■□□□□ 0.44
CLCN6-206ENST00000376496 HECW2Q9P2P5 1572 aa17.83■□□□□ 0.44
CLCN6-206ENST00000376496 ABCA6Q8N139 1617 aa17.82■□□□□ 0.44
CLCN6-206ENST00000376496 E9PCH4 1651 aa17.81■□□□□ 0.44
CLCN6-206ENST00000376496 MLH3Q9UHC1 1453 aa17.81■□□□□ 0.44
CLCN6-206ENST00000376496 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLCN6-206ENST00000376496 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
CLCN6-206ENST00000376496 DEPDC5O75140 1603 aa17.81■□□□□ 0.44
CLCN6-206ENST00000376496 FRMPD1Q5SYB0 1578 aa17.81■□□□□ 0.44
CLCN6-206ENST00000376496 MROH1Q8NDA8 1641 aa17.81■□□□□ 0.44
CLCN6-206ENST00000376496 YEATS2Q9ULM3 1422 aa17.8■□□□□ 0.44
CLCN6-206ENST00000376496 KANK1Q14678 1352 aa17.79■□□□□ 0.44
CLCN6-206ENST00000376496 RICTORQ6R327 1708 aa17.78■□□□□ 0.44
CLCN6-206ENST00000376496 PPRC1Q5VV67 1664 aaKnown RBP17.77■□□□□ 0.43
CLCN6-206ENST00000376496 C11orf95C9JLR9 678 aaPredicted RBP17.77■□□□□ 0.43
CLCN6-206ENST00000376496 ATP10AO60312 1499 aa17.77■□□□□ 0.43
CLCN6-206ENST00000376496 EIF2AK4Q9P2K8 1649 aaKnown RBP17.76■□□□□ 0.43
CLCN6-206ENST00000376496 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
CLCN6-206ENST00000376496 VWDEQ8N2E2 1590 aa17.75■□□□□ 0.43
CLCN6-206ENST00000376496 DIP2CQ9Y2E4 1556 aa17.74■□□□□ 0.43
CLCN6-206ENST00000376496 CEP152O94986 1710 aa17.74■□□□□ 0.43
CLCN6-206ENST00000376496 WASHC2AQ641Q2 1341 aa17.74■□□□□ 0.43
CLCN6-206ENST00000376496 TET3O43151 1660 aa17.74■□□□□ 0.43
CLCN6-206ENST00000376496 CFAP65Q6ZU64 1925 aaKnown RBP17.73■□□□□ 0.43
CLCN6-206ENST00000376496 KIF13AQ9H1H9 1805 aa17.73■□□□□ 0.43
CLCN6-206ENST00000376496 UGGT1Q9NYU2 1555 aa17.73■□□□□ 0.43
CLCN6-206ENST00000376496 CARD11Q9BXL7 1154 aa17.71■□□□□ 0.43
CLCN6-206ENST00000376496 SPHKAPQ2M3C7 1700 aa17.7■□□□□ 0.42
CLCN6-206ENST00000376496 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
CLCN6-206ENST00000376496 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
CLCN6-206ENST00000376496 WASHC2CQ9Y4E1 1318 aa17.7■□□□□ 0.42
CLCN6-206ENST00000376496 CLTCL1P53675 1640 aa17.7■□□□□ 0.42
CLCN6-206ENST00000376496 USP47Q96K76 1375 aa17.7■□□□□ 0.42
CLCN6-206ENST00000376496 COL17A1Q9UMD9 1497 aaPredicted RBP17.69■□□□□ 0.42
CLCN6-206ENST00000376496 SPATA31E1Q6ZUB1 1445 aa17.69■□□□□ 0.42
CLCN6-206ENST00000376496 RNF17Q9BXT8 1623 aaKnown RBP17.69■□□□□ 0.42
CLCN6-206ENST00000376496 PTPRTO14522 1441 aa17.68■□□□□ 0.42
CLCN6-206ENST00000376496 TRPM2O94759 1503 aa17.68■□□□□ 0.42
CLCN6-206ENST00000376496 POLR3GLQ9BT43 218 aa17.68■□□□□ 0.42
CLCN6-206ENST00000376496 EFCAB6Q5THR3 1501 aa17.67■□□□□ 0.42
CLCN6-206ENST00000376496 RALGAPBQ86X10 1494 aa17.67■□□□□ 0.42
CLCN6-206ENST00000376496 PRAG1Q86YV5 1406 aa17.67■□□□□ 0.42
CLCN6-206ENST00000376496 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
CLCN6-206ENST00000376496 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
CLCN6-206ENST00000376496 NPATQ14207 1427 aa17.64■□□□□ 0.42
CLCN6-206ENST00000376496 ABCC3O15438 1527 aa17.63■□□□□ 0.41
CLCN6-206ENST00000376496 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
CLCN6-206ENST00000376496 KIF7Q2M1P5 1343 aa17.63■□□□□ 0.41
CLCN6-206ENST00000376496 MLECQ14165 292 aa17.63■□□□□ 0.41
CLCN6-206ENST00000376496 ST20-MTHFSA0A0A6YYL1 179 aa17.62■□□□□ 0.41
CLCN6-206ENST00000376496 BCORL1Q5H9F3 1711 aa17.62■□□□□ 0.41
CLCN6-206ENST00000376496 LMTK2Q8IWU2 1503 aa17.61■□□□□ 0.41
CLCN6-206ENST00000376496 TRPM1Q7Z4N2 1603 aa17.61■□□□□ 0.41
CLCN6-206ENST00000376496 ZMYM4Q5VZL5 1548 aa17.61■□□□□ 0.41
CLCN6-206ENST00000376496 CNGB1Q14028 1251 aaPredicted RBP17.58■□□□□ 0.4
CLCN6-206ENST00000376496 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.4
CLCN6-206ENST00000376496 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.4
CLCN6-206ENST00000376496 ANP32CO43423 234 aa17.58■□□□□ 0.4
CLCN6-206ENST00000376496 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
CLCN6-206ENST00000376496 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
CLCN6-206ENST00000376496 MROH2AA6NES4 1674 aa17.56■□□□□ 0.4
CLCN6-206ENST00000376496 NUTM2DQ5VT03 806 aaPredicted RBP17.55■□□□□ 0.4
CLCN6-206ENST00000376496 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
CLCN6-206ENST00000376496 ADGRF5Q8IZF2 1346 aa17.55■□□□□ 0.4
CLCN6-206ENST00000376496 KIF1BO60333 1816 aa17.53■□□□□ 0.4
CLCN6-206ENST00000376496 MADDQ8WXG6 1647 aa17.53■□□□□ 0.4
CLCN6-206ENST00000376496 CNTLNQ9NXG0 1405 aa17.52■□□□□ 0.4
CLCN6-206ENST00000376496 CFAP70Q5T0N1 1121 aa17.51■□□□□ 0.39
CLCN6-206ENST00000376496 SYNMO15061 1565 aa17.5■□□□□ 0.39
CLCN6-206ENST00000376496 GPRASP1Q5JY77 1395 aa17.5■□□□□ 0.39
CLCN6-206ENST00000376496 CENPBP07199 599 aaPredicted RBP17.5■□□□□ 0.39
CLCN6-206ENST00000376496 IDI1Q13907 227 aa17.49■□□□□ 0.39
CLCN6-206ENST00000376496 NOS1P29475 1434 aa17.49■□□□□ 0.39
CLCN6-206ENST00000376496 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
CLCN6-206ENST00000376496 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
CLCN6-206ENST00000376496 ADGRB3O60242 1522 aa17.47■□□□□ 0.39
CLCN6-206ENST00000376496 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
CLCN6-206ENST00000376496 ZC3H13Q5T200 1668 aaKnown RBP17.45■□□□□ 0.38
CLCN6-206ENST00000376496 CLTCQ00610 1675 aaKnown RBP17.45■□□□□ 0.38
CLCN6-206ENST00000376496 TESK2Q96S53 571 aa17.45■□□□□ 0.38
CLCN6-206ENST00000376496 ARHGAP31Q2M1Z3 1444 aa17.44■□□□□ 0.38
CLCN6-206ENST00000376496 DISP3Q9P2K9 1392 aa17.44■□□□□ 0.38
CLCN6-206ENST00000376496 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
CLCN6-206ENST00000376496 AGLP35573 1532 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms