RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 HSPA5P11021 654 aaKnown RBP17.63■□□□□ 0.41
MSH5-204ENST00000375755 CCDC184Q52MB2 194 aa17.63■□□□□ 0.41
MSH5-204ENST00000375755 PLEKHH2Q8IVE3 1493 aa17.62■□□□□ 0.41
MSH5-204ENST00000375755 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
MSH5-204ENST00000375755 ABCC1P33527 1531 aa17.61■□□□□ 0.41
MSH5-204ENST00000375755 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
MSH5-204ENST00000375755 WASHC2AQ641Q2 1341 aa17.6■□□□□ 0.41
MSH5-204ENST00000375755 MAST1Q9Y2H9 1570 aa17.59■□□□□ 0.41
MSH5-204ENST00000375755 FAM135AQ9P2D6 1515 aa17.58■□□□□ 0.4
MSH5-204ENST00000375755 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
MSH5-204ENST00000375755 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
MSH5-204ENST00000375755 ABCA9Q8IUA7 1624 aa17.57■□□□□ 0.4
MSH5-204ENST00000375755 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
MSH5-204ENST00000375755 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
MSH5-204ENST00000375755 FANCAO15360 1455 aa17.56■□□□□ 0.4
MSH5-204ENST00000375755 PLXNC1O60486 1568 aa17.54■□□□□ 0.4
MSH5-204ENST00000375755 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
MSH5-204ENST00000375755 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
MSH5-204ENST00000375755 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
MSH5-204ENST00000375755 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
MSH5-204ENST00000375755 EIF4G2P78344 907 aaKnown RBP eCLIP17.53■□□□□ 0.4
MSH5-204ENST00000375755 ZBED9Q6R2W3 1325 aa17.51■□□□□ 0.39
MSH5-204ENST00000375755 UNC13BO14795 1591 aa17.51■□□□□ 0.39
MSH5-204ENST00000375755 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
MSH5-204ENST00000375755 ARAP3Q8WWN8 1544 aa17.5■□□□□ 0.39
MSH5-204ENST00000375755 DUOX2Q9NRD8 1548 aa17.5■□□□□ 0.39
MSH5-204ENST00000375755 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
MSH5-204ENST00000375755 ZFYVE16Q7Z3T8 1539 aa17.49■□□□□ 0.39
MSH5-204ENST00000375755 CNTLNQ9NXG0 1405 aa17.49■□□□□ 0.39
MSH5-204ENST00000375755 ADGRL1O94910 1474 aa17.49■□□□□ 0.39
MSH5-204ENST00000375755 PLA2R1Q13018 1463 aa17.49■□□□□ 0.39
MSH5-204ENST00000375755 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
MSH5-204ENST00000375755 DCAF11Q8TEB1 546 aa17.48■□□□□ 0.39
MSH5-204ENST00000375755 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
MSH5-204ENST00000375755 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
MSH5-204ENST00000375755 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
MSH5-204ENST00000375755 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.39
MSH5-204ENST00000375755 ANP32AP39687 249 aaKnown RBP17.45■□□□□ 0.38
MSH5-204ENST00000375755 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
MSH5-204ENST00000375755 ERBINQ96RT1 1412 aa17.45■□□□□ 0.38
MSH5-204ENST00000375755 IQGAP3Q86VI3 1631 aa17.45■□□□□ 0.38
MSH5-204ENST00000375755 GLI2P10070 1586 aa17.44■□□□□ 0.38
MSH5-204ENST00000375755 MAP3K4Q9Y6R4 1608 aa17.44■□□□□ 0.38
MSH5-204ENST00000375755 SPATA31E1Q6ZUB1 1445 aa17.43■□□□□ 0.38
MSH5-204ENST00000375755 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
MSH5-204ENST00000375755 ATP7AQ04656 1500 aa17.43■□□□□ 0.38
MSH5-204ENST00000375755 DIP2BQ9P265 1576 aa17.43■□□□□ 0.38
MSH5-204ENST00000375755 ZBTB47Q9UFB7 747 aaPredicted RBP17.42■□□□□ 0.38
MSH5-204ENST00000375755 CD109Q6YHK3 1445 aa17.42■□□□□ 0.38
MSH5-204ENST00000375755 CCDC144AA2RUR9 1427 aa17.41■□□□□ 0.38
MSH5-204ENST00000375755 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
MSH5-204ENST00000375755 MAGI2Q86UL8 1455 aa17.41■□□□□ 0.38
MSH5-204ENST00000375755 KIF3BO15066 747 aa17.4■□□□□ 0.38
MSH5-204ENST00000375755 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
MSH5-204ENST00000375755 CCDC7Q96M83 1385 aa17.39■□□□□ 0.37
MSH5-204ENST00000375755 BCORL1Q5H9F3 1711 aa17.39■□□□□ 0.37
MSH5-204ENST00000375755 POLR3GLQ9BT43 218 aa17.39■□□□□ 0.37
MSH5-204ENST00000375755 KIF13AQ9H1H9 1805 aa17.38■□□□□ 0.37
MSH5-204ENST00000375755 USP47Q96K76 1375 aa17.38■□□□□ 0.37
MSH5-204ENST00000375755 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
MSH5-204ENST00000375755 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
MSH5-204ENST00000375755 E9PCH4 1651 aa17.37■□□□□ 0.37
MSH5-204ENST00000375755 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
MSH5-204ENST00000375755 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
MSH5-204ENST00000375755 PPRC1Q5VV67 1664 aaKnown RBP17.37■□□□□ 0.37
MSH5-204ENST00000375755 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
MSH5-204ENST00000375755 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
MSH5-204ENST00000375755 UHRF1BP1Q6BDS2 1440 aa17.36■□□□□ 0.37
MSH5-204ENST00000375755 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
MSH5-204ENST00000375755 NBPF1Q3BBV0 1214 aa17.35■□□□□ 0.37
MSH5-204ENST00000375755 KDM5CP41229 1560 aa17.35■□□□□ 0.37
MSH5-204ENST00000375755 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
MSH5-204ENST00000375755 A2MP01023 1474 aa17.34■□□□□ 0.37
MSH5-204ENST00000375755 RALGAPBQ86X10 1494 aa17.33■□□□□ 0.36
MSH5-204ENST00000375755 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
MSH5-204ENST00000375755 DHX29Q7Z478 1369 aaKnown RBP17.32■□□□□ 0.36
MSH5-204ENST00000375755 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
MSH5-204ENST00000375755 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
MSH5-204ENST00000375755 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
MSH5-204ENST00000375755 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
MSH5-204ENST00000375755 MROH1Q8NDA8 1641 aa17.31■□□□□ 0.36
MSH5-204ENST00000375755 ATP10AO60312 1499 aa17.3■□□□□ 0.36
MSH5-204ENST00000375755 PRAG1Q86YV5 1406 aa17.3■□□□□ 0.36
MSH5-204ENST00000375755 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
MSH5-204ENST00000375755 POGZQ7Z3K3 1410 aa17.3■□□□□ 0.36
MSH5-204ENST00000375755 CFAP65Q6ZU64 1925 aaKnown RBP17.29■□□□□ 0.36
MSH5-204ENST00000375755 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
MSH5-204ENST00000375755 POLR1AO95602 1720 aaPredicted RBP17.28■□□□□ 0.36
MSH5-204ENST00000375755 TRPM1Q7Z4N2 1603 aa17.27■□□□□ 0.36
MSH5-204ENST00000375755 GGT6Q6P531 493 aa17.27■□□□□ 0.36
MSH5-204ENST00000375755 NEO1Q92859 1461 aa17.26■□□□□ 0.35
MSH5-204ENST00000375755 CLTCL1P53675 1640 aa17.26■□□□□ 0.35
MSH5-204ENST00000375755 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
MSH5-204ENST00000375755 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
MSH5-204ENST00000375755 FRMPD1Q5SYB0 1578 aa17.26■□□□□ 0.35
MSH5-204ENST00000375755 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
MSH5-204ENST00000375755 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
MSH5-204ENST00000375755 TET3O43151 1660 aa17.25■□□□□ 0.35
MSH5-204ENST00000375755 CEP152O94986 1710 aa17.25■□□□□ 0.35
MSH5-204ENST00000375755 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms