RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 GGT6Q6P531 493 aa26.54■■□□□ 1.84
C6orf48-204ENST00000375639 GCC2Q8IWJ2 1684 aa26.51■■□□□ 1.83
C6orf48-204ENST00000375639 EIF2AK4Q9P2K8 1649 aaKnown RBP26.5■■□□□ 1.83
C6orf48-204ENST00000375639 SETD5Q9C0A6 1442 aa26.48■■□□□ 1.83
C6orf48-204ENST00000375639 BCORL1Q5H9F3 1711 aa26.48■■□□□ 1.83
C6orf48-204ENST00000375639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.47■■□□□ 1.831e-10■□□□□ 10.7
C6orf48-204ENST00000375639 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
C6orf48-204ENST00000375639 MADDQ8WXG6 1647 aa26.46■■□□□ 1.83
C6orf48-204ENST00000375639 ESF1Q9H501 851 aaKnown RBP26.43■■□□□ 1.82
C6orf48-204ENST00000375639 RNF17Q9BXT8 1623 aaKnown RBP26.42■■□□□ 1.82
C6orf48-204ENST00000375639 PPP6R1Q9UPN7 881 aa26.4■■□□□ 1.82
C6orf48-204ENST00000375639 RAB3GAP2Q9H2M9 1393 aa26.4■■□□□ 1.82
C6orf48-204ENST00000375639 KANK1Q14678 1352 aa26.39■■□□□ 1.82
C6orf48-204ENST00000375639 TRIM52Q96A61 297 aa26.39■■□□□ 1.82
C6orf48-204ENST00000375639 WASHC2CQ9Y4E1 1318 aa26.38■■□□□ 1.81
C6orf48-204ENST00000375639 DEPDC5O75140 1603 aa26.37■■□□□ 1.81
C6orf48-204ENST00000375639 MROH1Q8NDA8 1641 aa26.37■■□□□ 1.81
C6orf48-204ENST00000375639 NUP155O75694 1391 aa26.36■■□□□ 1.81
C6orf48-204ENST00000375639 PRDM15P57071 1507 aaPredicted RBP26.35■■□□□ 1.81
C6orf48-204ENST00000375639 UNC13BO14795 1591 aa26.35■■□□□ 1.81
C6orf48-204ENST00000375639 FER1L4A9Z1Z3 1794 aa26.33■■□□□ 1.81
C6orf48-204ENST00000375639 RIMS1Q86UR5 1692 aaKnown RBP26.33■■□□□ 1.81
C6orf48-204ENST00000375639 CERKQ8TCT0 537 aa26.32■■□□□ 1.8
C6orf48-204ENST00000375639 KDM5DQ9BY66 1539 aa26.31■■□□□ 1.8
C6orf48-204ENST00000375639 SOCS7O14512 581 aa26.3■■□□□ 1.8
C6orf48-204ENST00000375639 HRCP23327 699 aa26.3■■□□□ 1.8
C6orf48-204ENST00000375639 HSPA2P54652 639 aa26.3■■□□□ 1.8
C6orf48-204ENST00000375639 ILDR2Q71H61 639 aa26.3■■□□□ 1.8
C6orf48-204ENST00000375639 CLTCQ00610 1675 aaKnown RBP26.3■■□□□ 1.8
C6orf48-204ENST00000375639 ACIN1Q9UKV3 1341 aaKnown RBP26.3■■□□□ 1.8
C6orf48-204ENST00000375639 CNTLNQ9NXG0 1405 aa26.3■■□□□ 1.8
C6orf48-204ENST00000375639 ABCC3O15438 1527 aa26.29■■□□□ 1.8
C6orf48-204ENST00000375639 FAM135AQ9P2D6 1515 aa26.28■■□□□ 1.8
C6orf48-204ENST00000375639 VWDEQ8N2E2 1590 aa26.28■■□□□ 1.8
C6orf48-204ENST00000375639 CEP152O94986 1710 aa26.28■■□□□ 1.8
C6orf48-204ENST00000375639 PLPPR3Q6T4P5 718 aa26.27■■□□□ 1.8
C6orf48-204ENST00000375639 ZC3H13Q5T200 1668 aaKnown RBP26.25■■□□□ 1.79
C6orf48-204ENST00000375639 DISP3Q9P2K9 1392 aa26.25■■□□□ 1.79
C6orf48-204ENST00000375639 IQGAP3Q86VI3 1631 aa26.25■■□□□ 1.79
C6orf48-204ENST00000375639 ZMYM3Q14202 1370 aa26.24■■□□□ 1.79
C6orf48-204ENST00000375639 SLC4A1APQ9BWU0 796 aaKnown RBP26.23■■□□□ 1.79
C6orf48-204ENST00000375639 LMTK2Q8IWU2 1503 aa26.23■■□□□ 1.79
C6orf48-204ENST00000375639 CEBPAP49715 358 aaPredicted RBP26.22■■□□□ 1.79
C6orf48-204ENST00000375639 MROH2AA6NES4 1674 aa26.2■■□□□ 1.78
C6orf48-204ENST00000375639 PZPP20742 1482 aa26.2■■□□□ 1.78
C6orf48-204ENST00000375639 CAMSAP1Q5T5Y3 1602 aa26.2■■□□□ 1.78
C6orf48-204ENST00000375639 MPHOSPH9Q99550 1183 aa26.19■■□□□ 1.78
C6orf48-204ENST00000375639 TET3O43151 1660 aa26.18■■□□□ 1.78
C6orf48-204ENST00000375639 C3P01024 1663 aa26.15■■□□□ 1.78
C6orf48-204ENST00000375639 EFCAB6Q5THR3 1501 aa26.15■■□□□ 1.78
C6orf48-204ENST00000375639 PKD2Q13563 968 aa26.15■■□□□ 1.78
C6orf48-204ENST00000375639 NPATQ14207 1427 aa26.14■■□□□ 1.78
C6orf48-204ENST00000375639 ARHGAP31Q2M1Z3 1444 aa26.14■■□□□ 1.78
C6orf48-204ENST00000375639 FBXO31Q5XUX0 539 aaPredicted RBP26.14■■□□□ 1.78
C6orf48-204ENST00000375639 CFAP65Q6ZU64 1925 aaKnown RBP26.12■■□□□ 1.77
C6orf48-204ENST00000375639 E9PCH4 1651 aa26.1■■□□□ 1.77
C6orf48-204ENST00000375639 FOXD1Q16676 465 aa26.09■■□□□ 1.77
C6orf48-204ENST00000375639 RPRD2Q5VT52 1461 aaKnown RBP26.09■■□□□ 1.77
C6orf48-204ENST00000375639 ERVK-7P63135 1459 aa26.06■■□□□ 1.76
C6orf48-204ENST00000375639 SPATA31D1Q6ZQQ2 1576 aa26.05■■□□□ 1.76
C6orf48-204ENST00000375639 PREX1Q8TCU6 1659 aa26.04■■□□□ 1.76
C6orf48-204ENST00000375639 TNRQ92752 1358 aa26.03■■□□□ 1.76
C6orf48-204ENST00000375639 NOS1P29475 1434 aa26.01■■□□□ 1.75
C6orf48-204ENST00000375639 DHX57Q6P158 1386 aaKnown RBP25.99■■□□□ 1.75
C6orf48-204ENST00000375639 SETD1BQ9UPS6 1966 aaKnown RBP25.97■■□□□ 1.75
C6orf48-204ENST00000375639 PTPRTO14522 1441 aa25.97■■□□□ 1.75
C6orf48-204ENST00000375639 STRCQ7RTU9 1775 aa25.96■■□□□ 1.75
C6orf48-204ENST00000375639 SPHKAPQ2M3C7 1700 aa25.96■■□□□ 1.75
C6orf48-204ENST00000375639 SYNMO15061 1565 aa25.95■■□□□ 1.75
C6orf48-204ENST00000375639 PLA2R1Q13018 1463 aa25.94■■□□□ 1.74
C6orf48-204ENST00000375639 SLC52A1Q9NWF4 448 aa25.94■■□□□ 1.74
C6orf48-204ENST00000375639 IDI1Q13907 227 aa25.92■■□□□ 1.74
C6orf48-204ENST00000375639 DMRT2Q9Y5R5 561 aa25.92■■□□□ 1.74
C6orf48-204ENST00000375639 TRPM2O94759 1503 aa25.91■■□□□ 1.74
C6orf48-204ENST00000375639 UGGT1Q9NYU2 1555 aa25.9■■□□□ 1.74
C6orf48-204ENST00000375639 UHRF1BP1Q6BDS2 1440 aa25.9■■□□□ 1.74
C6orf48-204ENST00000375639 ANKRD30BQ9BXX2 1392 aa25.9■■□□□ 1.74
C6orf48-204ENST00000375639 NLRP1Q9C000 1473 aa25.9■■□□□ 1.74
C6orf48-204ENST00000375639 MYO3AQ8NEV4 1616 aa25.89■■□□□ 1.74
C6orf48-204ENST00000375639 CHGAP10645 457 aaKnown RBP25.88■■□□□ 1.73
C6orf48-204ENST00000375639 STAG3Q9UJ98 1225 aa25.88■■□□□ 1.73
C6orf48-204ENST00000375639 CCDC144AA2RUR9 1427 aa25.87■■□□□ 1.73
C6orf48-204ENST00000375639 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
C6orf48-204ENST00000375639 PIK3C2BO00750 1634 aa25.85■■□□□ 1.73
C6orf48-204ENST00000375639 CLTCL1P53675 1640 aa25.85■■□□□ 1.73
C6orf48-204ENST00000375639 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
C6orf48-204ENST00000375639 CEP170BQ9Y4F5 1589 aaPredicted RBP25.83■■□□□ 1.73
C6orf48-204ENST00000375639 THEMISQ8N1K5 641 aaPredicted RBP25.79■■□□□ 1.72
C6orf48-204ENST00000375639 ZNF142P52746 1687 aaPredicted RBP25.79■■□□□ 1.72
C6orf48-204ENST00000375639 SIN3AQ96ST3 1273 aa25.78■■□□□ 1.72
C6orf48-204ENST00000375639 ADGRB3O60242 1522 aa25.77■■□□□ 1.72
C6orf48-204ENST00000375639 LTBP4Q8N2S1 1624 aa25.77■■□□□ 1.72
C6orf48-204ENST00000375639 UBR1Q8IWV7 1749 aa25.76■■□□□ 1.71
C6orf48-204ENST00000375639 KIF1BO60333 1816 aa25.76■■□□□ 1.71
C6orf48-204ENST00000375639 IQSEC2Q5JU85 1478 aa25.75■■□□□ 1.71
C6orf48-204ENST00000375639 NEUROD1Q13562 356 aa25.75■■□□□ 1.71
C6orf48-204ENST00000375639 ZNF326Q5BKZ1 582 aaKnown RBP25.75■■□□□ 1.71
C6orf48-204ENST00000375639 TMEM131LA2VDJ0 1609 aa25.74■■□□□ 1.71
C6orf48-204ENST00000375639 RGL3Q3MIN7 710 aa25.74■■□□□ 1.71
C6orf48-204ENST00000375639 KDM5AP29375 1690 aaKnown RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms