RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 PANK3Q9H999 370 aa21.56■■□□□ 1.04
MCF2L-203ENST00000375604 SMARCA2P51531 1590 aa21.56■■□□□ 1.04
MCF2L-203ENST00000375604 MSH5O43196 834 aa21.56■■□□□ 1.04
MCF2L-203ENST00000375604 JPH4Q96JJ6 628 aa21.56■■□□□ 1.04
MCF2L-203ENST00000375604 MINK1Q8N4C8 1332 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-203ENST00000375604 CALD1Q05682 793 aaKnown RBP21.55■■□□□ 1.04
MCF2L-203ENST00000375604 FRAT2O75474 233 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-203ENST00000375604 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
MCF2L-203ENST00000375604 ST20-MTHFSA0A0A6YYL1 179 aa21.53■■□□□ 1.04
MCF2L-203ENST00000375604 TCERG1O14776 1098 aaKnown RBP21.53■■□□□ 1.04
MCF2L-203ENST00000375604 GTF2E1P29083 439 aaPredicted RBP21.53■■□□□ 1.04
MCF2L-203ENST00000375604 EVA1CP58658 441 aa21.53■■□□□ 1.04
MCF2L-203ENST00000375604 FOXD4L6Q3SYB3 417 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-203ENST00000375604 FOXD4L3Q6VB84 417 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-203ENST00000375604 CENPJQ9HC77 1338 aaPredicted RBP21.5■■□□□ 1.03
MCF2L-203ENST00000375604 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
MCF2L-203ENST00000375604 VPS53Q5VIR6 699 aa21.49■■□□□ 1.03
MCF2L-203ENST00000375604 EIF2S2P20042 333 aaKnown RBP21.49■■□□□ 1.03
MCF2L-203ENST00000375604 NRDCO43847 1150 aa21.49■■□□□ 1.03
MCF2L-203ENST00000375604 RILPL2Q969X0 211 aa21.48■■□□□ 1.03
MCF2L-203ENST00000375604 SYTL4Q96C24 671 aaPredicted RBP21.48■■□□□ 1.03
MCF2L-203ENST00000375604 GPATCH3Q96I76 525 aa21.48■■□□□ 1.03
MCF2L-203ENST00000375604 PMFBP1Q8TBY8 1022 aa21.48■■□□□ 1.03
MCF2L-203ENST00000375604 CHAF1AQ13111 956 aaPredicted RBP21.47■■□□□ 1.03
MCF2L-203ENST00000375604 TIMELESSQ9UNS1 1208 aa21.47■■□□□ 1.03
MCF2L-203ENST00000375604 SLC4A3P48751 1232 aa21.46■■□□□ 1.03
MCF2L-203ENST00000375604 RASSF8Q8NHQ8 419 aa21.45■■□□□ 1.02
MCF2L-203ENST00000375604 NUTM2GQ5VZR2 741 aa21.45■■□□□ 1.02
MCF2L-203ENST00000375604 RAD21O60216 631 aa21.44■■□□□ 1.02
MCF2L-203ENST00000375604 CCDC18Q5T9S5 1454 aa21.44■■□□□ 1.02
MCF2L-203ENST00000375604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.43■■□□□ 1.02
MCF2L-203ENST00000375604 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
MCF2L-203ENST00000375604 C1orf141Q5JVX7 400 aa21.42■■□□□ 1.02
MCF2L-203ENST00000375604 COG3Q96JB2 828 aa21.42■■□□□ 1.02
MCF2L-203ENST00000375604 GBP4Q96PP9 640 aa21.41■■□□□ 1.02
MCF2L-203ENST00000375604 L1TD1Q5T7N2 865 aaKnown RBP21.4■■□□□ 1.02
MCF2L-203ENST00000375604 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
MCF2L-203ENST00000375604 CCDC144AA2RUR9 1427 aa21.4■■□□□ 1.02
MCF2L-203ENST00000375604 FBXW7Q969H0 707 aa21.39■■□□□ 1.01
MCF2L-203ENST00000375604 HMMRO75330 724 aa21.39■■□□□ 1.01
MCF2L-203ENST00000375604 MEX3CQ5U5Q3 659 aaKnown RBP21.38■■□□□ 1.01
MCF2L-203ENST00000375604 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
MCF2L-203ENST00000375604 KLHL34Q8N239 644 aa21.37■■□□□ 1.01
MCF2L-203ENST00000375604 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
MCF2L-203ENST00000375604 NLRP13Q86W25 1043 aa21.36■■□□□ 1.01
MCF2L-203ENST00000375604 KIAA2012Q0VF49 1180 aa21.35■■□□□ 1.01
MCF2L-203ENST00000375604 NOC3LQ8WTT2 800 aaKnown RBP21.35■■□□□ 1.01
MCF2L-203ENST00000375604 PRM3Q9NNZ6 103 aa21.35■■□□□ 1.01
MCF2L-203ENST00000375604 ZNF428Q96B54 188 aa21.34■■□□□ 1.01
MCF2L-203ENST00000375604 CRBNQ96SW2 442 aa21.34■■□□□ 1.01
MCF2L-203ENST00000375604 KIF15Q9NS87 1388 aa21.34■■□□□ 1.01
MCF2L-203ENST00000375604 CFAP44Q96MT7 982 aa21.34■■□□□ 1.01
MCF2L-203ENST00000375604 EXOC6Q8TAG9 804 aa21.33■■□□□ 1.01
MCF2L-203ENST00000375604 COG6Q9Y2V7 657 aa21.33■■□□□ 1
MCF2L-203ENST00000375604 PSME1Q06323 249 aa21.33■■□□□ 1
MCF2L-203ENST00000375604 ZNF644Q9H582 1327 aaPredicted RBP21.33■■□□□ 1
MCF2L-203ENST00000375604 MYBBP1AQ9BQG0 1328 aaKnown RBP21.32■■□□□ 1
MCF2L-203ENST00000375604 MARCH6O60337 910 aa21.32■■□□□ 1
MCF2L-203ENST00000375604 LMOD3Q0VAK6 560 aa21.32■■□□□ 1
MCF2L-203ENST00000375604 HMOX1P09601 288 aa21.32■■□□□ 1
MCF2L-203ENST00000375604 WWC1Q8IX03 1113 aa21.31■■□□□ 1
MCF2L-203ENST00000375604 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
MCF2L-203ENST00000375604 FAM69CQ0P6D2 419 aa21.3■■□□□ 1
MCF2L-203ENST00000375604 PTPRGP23470 1445 aa21.3■■□□□ 1
MCF2L-203ENST00000375604 EVC2Q86UK5 1308 aa21.3■■□□□ 1
MCF2L-203ENST00000375604 PES1O00541 588 aaKnown RBP21.29■■□□□ 1
MCF2L-203ENST00000375604 APAF1O14727 1248 aa21.29■■□□□ 1
MCF2L-203ENST00000375604 FOSBP53539 338 aa21.29■■□□□ 1
MCF2L-203ENST00000375604 TTC5Q8N0Z6 440 aa21.29■■□□□ 1
MCF2L-203ENST00000375604 TEFQ10587 303 aa21.28■■□□□ 1
MCF2L-203ENST00000375604 TSHZ2Q9NRE2 1034 aa21.28■■□□□ 1
MCF2L-203ENST00000375604 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
MCF2L-203ENST00000375604 SAMD1Q6SPF0 538 aaPredicted RBP21.27■■□□□ 1
MCF2L-203ENST00000375604 KIF16BQ96L93 1317 aa21.26■□□□□ 0.99
MCF2L-203ENST00000375604 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
MCF2L-203ENST00000375604 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
MCF2L-203ENST00000375604 USP47Q96K76 1375 aa21.26■□□□□ 0.99
MCF2L-203ENST00000375604 H3BQV1 296 aa21.25■□□□□ 0.99
MCF2L-203ENST00000375604 KDM4AO75164 1064 aa21.25■□□□□ 0.99
MCF2L-203ENST00000375604 IFFO2Q5TF58 517 aa21.25■□□□□ 0.99
MCF2L-203ENST00000375604 CABP2Q9NPB3 220 aa21.25■□□□□ 0.99
MCF2L-203ENST00000375604 VGFO15240 615 aaPredicted RBP21.25■□□□□ 0.99
MCF2L-203ENST00000375604 TMEM132EQ6IEE7 984 aa21.25■□□□□ 0.99
MCF2L-203ENST00000375604 HTATSF1O43719 755 aaKnown RBP21.25■□□□□ 0.99
MCF2L-203ENST00000375604 RIPK4P57078 832 aa21.24■□□□□ 0.99
MCF2L-203ENST00000375604 C9orf78Q9NZ63 289 aaPredicted RBP21.24■□□□□ 0.99
MCF2L-203ENST00000375604 GOLGA6L3A6NEY3 463 aa21.24■□□□□ 0.99
MCF2L-203ENST00000375604 SF3A1Q15459 793 aaKnown RBP21.24■□□□□ 0.99
MCF2L-203ENST00000375604 AIMP1Q12904 312 aaKnown RBP21.24■□□□□ 0.99
MCF2L-203ENST00000375604 TPM4P67936 248 aa21.23■□□□□ 0.99
MCF2L-203ENST00000375604 MCTP1Q6DN14 999 aa21.23■□□□□ 0.99
MCF2L-203ENST00000375604 DHX57Q6P158 1386 aaKnown RBP21.23■□□□□ 0.99
MCF2L-203ENST00000375604 IPO9Q96P70 1041 aaKnown RBP21.23■□□□□ 0.99
MCF2L-203ENST00000375604 USP35Q9P2H5 1018 aa21.22■□□□□ 0.99
MCF2L-203ENST00000375604 APPP05067 770 aa21.22■□□□□ 0.99
MCF2L-203ENST00000375604 RSPH4AQ5TD94 716 aa21.22■□□□□ 0.99
MCF2L-203ENST00000375604 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
MCF2L-203ENST00000375604 SYAP1Q96A49 352 aaPredicted RBP21.21■□□□□ 0.99
MCF2L-203ENST00000375604 ST18O60284 1047 aa21.2■□□□□ 0.98
MCF2L-203ENST00000375604 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms