RNA–Protein interactions for RNA: ENST00000375300.5

SIK3-201, Transcript of SIK family kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIK3, Length 6,213 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-201ENST00000375300 PMFBP1Q8TBY8 1022 aa20.15■□□□□ 0.82
SIK3-201ENST00000375300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.14■□□□□ 0.818e-7■■■□□ 14.8
SIK3-201ENST00000375300 RTF1Q92541 710 aaKnown RBP20.12■□□□□ 0.81
SIK3-201ENST00000375300 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
SIK3-201ENST00000375300 GBP4Q96PP9 640 aa20.11■□□□□ 0.81
SIK3-201ENST00000375300 MCCP23508 829 aa20.11■□□□□ 0.81
SIK3-201ENST00000375300 HDGFP51858 240 aaKnown RBP20.11■□□□□ 0.81
SIK3-201ENST00000375300 EIF3AQ14152 1382 aaKnown RBP20.1■□□□□ 0.81
SIK3-201ENST00000375300 GOLGA6L4A6NEF3 574 aa20.09■□□□□ 0.81
SIK3-201ENST00000375300 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
SIK3-201ENST00000375300 GOLGA6L3A6NEY3 463 aa20.09■□□□□ 0.81
SIK3-201ENST00000375300 FANCIQ9NVI1 1328 aa20.09■□□□□ 0.81
SIK3-201ENST00000375300 NOL8Q76FK4 1167 aaKnown RBP20.08■□□□□ 0.81
SIK3-201ENST00000375300 KIF7Q2M1P5 1343 aa20.08■□□□□ 0.8
SIK3-201ENST00000375300 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
SIK3-201ENST00000375300 COG6Q9Y2V7 657 aa20.06■□□□□ 0.8
SIK3-201ENST00000375300 CENPQQ7L2Z9 268 aaPredicted RBP20.06■□□□□ 0.8
SIK3-201ENST00000375300 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
SIK3-201ENST00000375300 CCDC7Q96M83 1385 aa20.05■□□□□ 0.8
SIK3-201ENST00000375300 FAM161AQ3B820 660 aa20.05■□□□□ 0.8
SIK3-201ENST00000375300 LTV1Q96GA3 475 aaPredicted RBP20.05■□□□□ 0.8
SIK3-201ENST00000375300 NPHP1O15259 732 aa20.05■□□□□ 0.8
SIK3-201ENST00000375300 DRC7Q8IY82 874 aa20.05■□□□□ 0.8
SIK3-201ENST00000375300 TULP1O00294 542 aaPredicted RBP20.04■□□□□ 0.8
SIK3-201ENST00000375300 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
SIK3-201ENST00000375300 FOXD4L5Q5VV16 416 aaPredicted RBP20.04■□□□□ 0.8
SIK3-201ENST00000375300 FOXD4L4Q8WXT5 416 aaPredicted RBP20.04■□□□□ 0.8
SIK3-201ENST00000375300 APAF1O14727 1248 aa20.03■□□□□ 0.8
SIK3-201ENST00000375300 ZNF330Q9Y3S2 320 aaPredicted RBP20.03■□□□□ 0.8
SIK3-201ENST00000375300 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
SIK3-201ENST00000375300 CDK11BP21127 795 aaKnown RBP20.03■□□□□ 0.8
SIK3-201ENST00000375300 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
SIK3-201ENST00000375300 LRRC9Q6ZRR7 1453 aa20.03■□□□□ 0.8
SIK3-201ENST00000375300 CSB-PGBD3P0DP91 1061 aa20■□□□□ 0.79
SIK3-201ENST00000375300 FAM69CQ0P6D2 419 aa20■□□□□ 0.79
SIK3-201ENST00000375300 ARAP1Q96P48 1450 aa20■□□□□ 0.79
SIK3-201ENST00000375300 TRIM6-TRIM34B2RNG4 842 aa19.99■□□□□ 0.79
SIK3-201ENST00000375300 CNTLNQ9NXG0 1405 aa19.99■□□□□ 0.79
SIK3-201ENST00000375300 KIAA1211Q6ZU35 1233 aa19.98■□□□□ 0.79
SIK3-201ENST00000375300 CUX1P39880 1505 aa19.98■□□□□ 0.79
SIK3-201ENST00000375300 GSE1Q14687 1217 aa19.98■□□□□ 0.79
SIK3-201ENST00000375300 CALD1Q05682 793 aaKnown RBP19.98■□□□□ 0.79
SIK3-201ENST00000375300 CHAF1AQ13111 956 aaPredicted RBP19.97■□□□□ 0.79
SIK3-201ENST00000375300 UACAQ9BZF9 1416 aa19.97■□□□□ 0.79
SIK3-201ENST00000375300 MINK1Q8N4C8 1332 aaPredicted RBP19.97■□□□□ 0.79
SIK3-201ENST00000375300 NGDNQ8NEJ9 315 aaKnown RBP19.96■□□□□ 0.79
SIK3-201ENST00000375300 GOLGA6L6A8MZA4 724 aa19.96■□□□□ 0.79
SIK3-201ENST00000375300 TERF2IPQ9NYB0 399 aa19.95■□□□□ 0.78
SIK3-201ENST00000375300 CFTRP13569 1480 aa19.95■□□□□ 0.78
SIK3-201ENST00000375300 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
SIK3-201ENST00000375300 E9PSI1 815 aa19.94■□□□□ 0.78
SIK3-201ENST00000375300 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
SIK3-201ENST00000375300 CFAP44Q96MT7 982 aa19.94■□□□□ 0.78
SIK3-201ENST00000375300 RSPH4AQ5TD94 716 aa19.94■□□□□ 0.78
SIK3-201ENST00000375300 ANKRD45Q5TZF3 282 aa19.93■□□□□ 0.78
SIK3-201ENST00000375300 USP35Q9P2H5 1018 aa19.92■□□□□ 0.78
SIK3-201ENST00000375300 AFAP1Q8N556 730 aa19.92■□□□□ 0.78
SIK3-201ENST00000375300 CDCA7LQ96GN5 454 aa19.91■□□□□ 0.78
SIK3-201ENST00000375300 FOXD4L6Q3SYB3 417 aaPredicted RBP19.91■□□□□ 0.78
SIK3-201ENST00000375300 FOXD4L3Q6VB84 417 aaPredicted RBP19.91■□□□□ 0.78
SIK3-201ENST00000375300 AMER1Q5JTC6 1135 aaPredicted RBP19.9■□□□□ 0.78
SIK3-201ENST00000375300 STK31Q9BXU1 1019 aa19.9■□□□□ 0.78
SIK3-201ENST00000375300 PTMSP20962 102 aa19.9■□□□□ 0.78
SIK3-201ENST00000375300 NCOA2Q15596 1464 aa19.89■□□□□ 0.78
SIK3-201ENST00000375300 CCDC9Q9Y3X0 531 aaKnown RBP19.89■□□□□ 0.77
SIK3-201ENST00000375300 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
SIK3-201ENST00000375300 CCDC184Q52MB2 194 aa19.89■□□□□ 0.77
SIK3-201ENST00000375300 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
SIK3-201ENST00000375300 ZKSCAN2Q63HK3 967 aa19.88■□□□□ 0.77
SIK3-201ENST00000375300 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
SIK3-201ENST00000375300 PRG4Q92954 1404 aaPredicted RBP19.87■□□□□ 0.77
SIK3-201ENST00000375300 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
SIK3-201ENST00000375300 KIAA2012Q0VF49 1180 aa19.86■□□□□ 0.77
SIK3-201ENST00000375300 AKNAQ7Z591 1439 aa19.86■□□□□ 0.77
SIK3-201ENST00000375300 TMEM132EQ6IEE7 984 aa19.86■□□□□ 0.77
SIK3-201ENST00000375300 SNAPC4Q5SXM2 1469 aa19.85■□□□□ 0.77
SIK3-201ENST00000375300 PANK1Q8TE04 598 aa19.85■□□□□ 0.77
SIK3-201ENST00000375300 NRDCO43847 1150 aa19.84■□□□□ 0.77
SIK3-201ENST00000375300 AMPHP49418 695 aa19.84■□□□□ 0.77
SIK3-201ENST00000375300 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
SIK3-201ENST00000375300 MRC2Q9UBG0 1479 aa19.84■□□□□ 0.77
SIK3-201ENST00000375300 HMMRO75330 724 aa19.83■□□□□ 0.77
SIK3-201ENST00000375300 WDR97A6NE52 1622 aa19.83■□□□□ 0.77
SIK3-201ENST00000375300 CGNL1Q0VF96 1302 aa19.83■□□□□ 0.77
SIK3-201ENST00000375300 ADAMTS8Q9UP79 889 aa19.83■□□□□ 0.76
SIK3-201ENST00000375300 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
SIK3-201ENST00000375300 GNL2Q13823 731 aaKnown RBP19.82■□□□□ 0.76
SIK3-201ENST00000375300 RILPL2Q969X0 211 aa19.82■□□□□ 0.76
SIK3-201ENST00000375300 SYAP1Q96A49 352 aaPredicted RBP19.82■□□□□ 0.76
SIK3-201ENST00000375300 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
SIK3-201ENST00000375300 DDX11L8A8MPP1 907 aa19.81■□□□□ 0.76
SIK3-201ENST00000375300 CHMP3Q9Y3E7 222 aa19.81■□□□□ 0.76
SIK3-201ENST00000375300 NBPF8Q3BBV2 869 aa19.81■□□□□ 0.76
SIK3-201ENST00000375300 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
SIK3-201ENST00000375300 CASKIN1Q8WXD9 1431 aa19.8■□□□□ 0.76
SIK3-201ENST00000375300 ST18O60284 1047 aa19.8■□□□□ 0.76
SIK3-201ENST00000375300 HSP90B1P14625 803 aaKnown RBP19.79■□□□□ 0.76
SIK3-201ENST00000375300 NFKBIBQ15653 356 aa19.79■□□□□ 0.76
SIK3-201ENST00000375300 LMOD3Q0VAK6 560 aa19.77■□□□□ 0.76
SIK3-201ENST00000375300 NUTM2GQ5VZR2 741 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms