RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PLA2R1Q13018 1463 aa22.08■■□□□ 1.12
CNKSR1-202ENST00000374253 MRS2Q9HD23 443 aa22.08■■□□□ 1.12
CNKSR1-202ENST00000374253 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
CNKSR1-202ENST00000374253 MYT1LQ9UL68 1186 aa22.07■■□□□ 1.12
CNKSR1-202ENST00000374253 RALGAPBQ86X10 1494 aa22.06■■□□□ 1.12
CNKSR1-202ENST00000374253 ABCC1P33527 1531 aa22.06■■□□□ 1.12
CNKSR1-202ENST00000374253 SPAG9O60271 1321 aaKnown RBP22.06■■□□□ 1.12
CNKSR1-202ENST00000374253 PLXNC1O60486 1568 aa22.06■■□□□ 1.12
CNKSR1-202ENST00000374253 UNC13BO14795 1591 aa22.05■■□□□ 1.12
CNKSR1-202ENST00000374253 PELP1Q8IZL8 1130 aaKnown RBP22.05■■□□□ 1.12
CNKSR1-202ENST00000374253 DUOX2Q9NRD8 1548 aa22.04■■□□□ 1.12
CNKSR1-202ENST00000374253 ROCK2O75116 1388 aaKnown RBP22.04■■□□□ 1.12
CNKSR1-202ENST00000374253 NBPF1Q3BBV0 1214 aa22.04■■□□□ 1.12
CNKSR1-202ENST00000374253 POLR1AO95602 1720 aaPredicted RBP22.03■■□□□ 1.12
CNKSR1-202ENST00000374253 WDR7Q9Y4E6 1490 aa22.02■■□□□ 1.12
CNKSR1-202ENST00000374253 IQGAP3Q86VI3 1631 aa21.99■■□□□ 1.11
CNKSR1-202ENST00000374253 ERBINQ96RT1 1412 aa21.98■■□□□ 1.11
CNKSR1-202ENST00000374253 DHX29Q7Z478 1369 aaKnown RBP21.98■■□□□ 1.11
CNKSR1-202ENST00000374253 SENP3-EIF4A1A0A087X0R7 540 aa21.98■■□□□ 1.11
CNKSR1-202ENST00000374253 FANCAO15360 1455 aa21.97■■□□□ 1.11
CNKSR1-202ENST00000374253 A2MP01023 1474 aa21.97■■□□□ 1.11
CNKSR1-202ENST00000374253 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
CNKSR1-202ENST00000374253 ASXL2Q76L83 1435 aa21.95■■□□□ 1.1
CNKSR1-202ENST00000374253 NEFLP07196 543 aa21.95■■□□□ 1.1
CNKSR1-202ENST00000374253 OSCARQ8IYS5 282 aa21.94■■□□□ 1.1
CNKSR1-202ENST00000374253 SCAPERQ9BY12 1400 aa21.93■■□□□ 1.1
CNKSR1-202ENST00000374253 ZFYVE16Q7Z3T8 1539 aa21.93■■□□□ 1.1
CNKSR1-202ENST00000374253 IRX6P78412 446 aaPredicted RBP21.92■■□□□ 1.1
CNKSR1-202ENST00000374253 MAGI2Q86UL8 1455 aa21.92■■□□□ 1.1
CNKSR1-202ENST00000374253 KIF3BO15066 747 aa21.91■■□□□ 1.1
CNKSR1-202ENST00000374253 ADGRL1O94910 1474 aa21.9■■□□□ 1.1
CNKSR1-202ENST00000374253 TRPM1Q7Z4N2 1603 aa21.89■■□□□ 1.09
CNKSR1-202ENST00000374253 NPM1P06748 294 aaKnown RBP eCLIP21.87■■□□□ 1.09
CNKSR1-202ENST00000374253 ARID4BQ4LE39 1312 aaPredicted RBP21.87■■□□□ 1.09
CNKSR1-202ENST00000374253 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
CNKSR1-202ENST00000374253 ABCA9Q8IUA7 1624 aa21.86■■□□□ 1.09
CNKSR1-202ENST00000374253 ATP7AQ04656 1500 aa21.86■■□□□ 1.09
CNKSR1-202ENST00000374253 ARAP3Q8WWN8 1544 aa21.86■■□□□ 1.09
CNKSR1-202ENST00000374253 E9PCH4 1651 aa21.84■■□□□ 1.09
CNKSR1-202ENST00000374253 ATP10AO60312 1499 aa21.82■■□□□ 1.08
CNKSR1-202ENST00000374253 DISP3Q9P2K9 1392 aa21.8■■□□□ 1.08
CNKSR1-202ENST00000374253 INO80Q9ULG1 1556 aaPredicted RBP21.8■■□□□ 1.08
CNKSR1-202ENST00000374253 TMC1Q8TDI8 760 aa21.78■■□□□ 1.08
CNKSR1-202ENST00000374253 TESK2Q96S53 571 aa21.78■■□□□ 1.08
CNKSR1-202ENST00000374253 GPRASP1Q5JY77 1395 aa21.78■■□□□ 1.08
CNKSR1-202ENST00000374253 ZBED9Q6R2W3 1325 aa21.77■■□□□ 1.08
CNKSR1-202ENST00000374253 KANK1Q14678 1352 aa21.77■■□□□ 1.08
CNKSR1-202ENST00000374253 CLTCL1P53675 1640 aa21.74■■□□□ 1.07
CNKSR1-202ENST00000374253 TSHZ2Q9NRE2 1034 aa21.74■■□□□ 1.07
CNKSR1-202ENST00000374253 PRDM15P57071 1507 aaPredicted RBP21.74■■□□□ 1.07
CNKSR1-202ENST00000374253 UGGT1Q9NYU2 1555 aa21.73■■□□□ 1.07
CNKSR1-202ENST00000374253 CD109Q6YHK3 1445 aa21.73■■□□□ 1.07
CNKSR1-202ENST00000374253 DEPDC5O75140 1603 aa21.73■■□□□ 1.07
CNKSR1-202ENST00000374253 TRPM2O94759 1503 aa21.73■■□□□ 1.07
CNKSR1-202ENST00000374253 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
CNKSR1-202ENST00000374253 SPHKAPQ2M3C7 1700 aa21.72■■□□□ 1.07
CNKSR1-202ENST00000374253 PNISRQ8TF01 805 aaKnown RBP21.72■■□□□ 1.07
CNKSR1-202ENST00000374253 PTPRTO14522 1441 aa21.7■■□□□ 1.07
CNKSR1-202ENST00000374253 EIF2AK4Q9P2K8 1649 aaKnown RBP21.7■■□□□ 1.06
CNKSR1-202ENST00000374253 GGT6Q6P531 493 aa21.7■■□□□ 1.06
CNKSR1-202ENST00000374253 KIDINS220Q9ULH0 1771 aa21.7■■□□□ 1.06
CNKSR1-202ENST00000374253 PANK3Q9H999 370 aa21.7■■□□□ 1.06
CNKSR1-202ENST00000374253 TET3O43151 1660 aa21.69■■□□□ 1.06
CNKSR1-202ENST00000374253 COL17A1Q9UMD9 1497 aaPredicted RBP21.69■■□□□ 1.06
CNKSR1-202ENST00000374253 TMF1P82094 1093 aa21.69■■□□□ 1.06
CNKSR1-202ENST00000374253 RAPGEF3O95398 923 aa21.68■■□□□ 1.06
CNKSR1-202ENST00000374253 MYBBP1AQ9BQG0 1328 aaKnown RBP21.68■■□□□ 1.06
CNKSR1-202ENST00000374253 MROH1Q8NDA8 1641 aa21.68■■□□□ 1.06
CNKSR1-202ENST00000374253 PER1O15534 1290 aaPredicted RBP21.67■■□□□ 1.06
CNKSR1-202ENST00000374253 ZNF518AQ6AHZ1 1483 aa21.67■■□□□ 1.06
CNKSR1-202ENST00000374253 MADDQ8WXG6 1647 aa21.67■■□□□ 1.06
CNKSR1-202ENST00000374253 CHGAP10645 457 aaKnown RBP21.67■■□□□ 1.06
CNKSR1-202ENST00000374253 CEP152O94986 1710 aa21.66■■□□□ 1.06
CNKSR1-202ENST00000374253 RALBP1Q15311 655 aa21.66■■□□□ 1.06
CNKSR1-202ENST00000374253 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
CNKSR1-202ENST00000374253 VWDEQ8N2E2 1590 aa21.66■■□□□ 1.06
CNKSR1-202ENST00000374253 CFAP65Q6ZU64 1925 aaKnown RBP21.66■■□□□ 1.06
CNKSR1-202ENST00000374253 KTN1Q86UP2 1357 aaKnown RBP21.65■■□□□ 1.06
CNKSR1-202ENST00000374253 LAMC1P11047 1609 aa21.64■■□□□ 1.05
CNKSR1-202ENST00000374253 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
CNKSR1-202ENST00000374253 RNF17Q9BXT8 1623 aaKnown RBP21.62■■□□□ 1.05
CNKSR1-202ENST00000374253 ADGRF5Q8IZF2 1346 aa21.62■■□□□ 1.05
CNKSR1-202ENST00000374253 CYB5RLQ6IPT4 315 aa21.62■■□□□ 1.05
CNKSR1-202ENST00000374253 POGZQ7Z3K3 1410 aa21.61■■□□□ 1.05
CNKSR1-202ENST00000374253 BRD4O60885 1362 aaPredicted RBP21.6■■□□□ 1.05
CNKSR1-202ENST00000374253 PPRC1Q5VV67 1664 aaKnown RBP21.59■■□□□ 1.05
CNKSR1-202ENST00000374253 PARD3Q8TEW0 1356 aa21.59■■□□□ 1.05
CNKSR1-202ENST00000374253 NLRP13Q86W25 1043 aa21.58■■□□□ 1.05
CNKSR1-202ENST00000374253 EFCAB6Q5THR3 1501 aa21.58■■□□□ 1.04
CNKSR1-202ENST00000374253 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
CNKSR1-202ENST00000374253 FRMPD1Q5SYB0 1578 aa21.55■■□□□ 1.04
CNKSR1-202ENST00000374253 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
CNKSR1-202ENST00000374253 SCAF11Q99590 1463 aaKnown RBP21.55■■□□□ 1.04
CNKSR1-202ENST00000374253 IQGAP1P46940 1657 aa21.54■■□□□ 1.04
CNKSR1-202ENST00000374253 LRPPRCP42704 1394 aaKnown RBP21.54■■□□□ 1.04
CNKSR1-202ENST00000374253 NUTM2DQ5VT03 806 aaPredicted RBP21.54■■□□□ 1.04
CNKSR1-202ENST00000374253 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
CNKSR1-202ENST00000374253 MROH2AA6NES4 1674 aa21.52■■□□□ 1.04
CNKSR1-202ENST00000374253 NPATQ14207 1427 aa21.52■■□□□ 1.04
CNKSR1-202ENST00000374253 HECW2Q9P2P5 1572 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms