RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 UNC13BO14795 1591 aa25.93■■□□□ 1.74
C9orf43-202ENST00000374165 DEPDC5O75140 1603 aa25.92■■□□□ 1.74
C9orf43-202ENST00000374165 PZPP20742 1482 aa25.91■■□□□ 1.74
C9orf43-202ENST00000374165 MROH1Q8NDA8 1641 aa25.91■■□□□ 1.74
C9orf43-202ENST00000374165 MPHOSPH9Q99550 1183 aa25.91■■□□□ 1.74
C9orf43-202ENST00000374165 GGT6Q6P531 493 aa25.9■■□□□ 1.74
C9orf43-202ENST00000374165 REREQ9P2R6 1566 aa25.9■■□□□ 1.74
C9orf43-202ENST00000374165 BCORL1Q5H9F3 1711 aa25.89■■□□□ 1.74
C9orf43-202ENST00000374165 SLC4A1APQ9BWU0 796 aaKnown RBP25.87■■□□□ 1.73
C9orf43-202ENST00000374165 RNF17Q9BXT8 1623 aaKnown RBP25.87■■□□□ 1.73
C9orf43-202ENST00000374165 ZEB1P37275 1124 aaPredicted RBP25.87■■□□□ 1.73
C9orf43-202ENST00000374165 FOXD1Q16676 465 aa25.87■■□□□ 1.73
C9orf43-202ENST00000374165 KDM5DQ9BY66 1539 aa25.86■■□□□ 1.73
C9orf43-202ENST00000374165 FAM135AQ9P2D6 1515 aa25.85■■□□□ 1.73
C9orf43-202ENST00000374165 AGLP35573 1532 aa25.85■■□□□ 1.73
C9orf43-202ENST00000374165 PRDM15P57071 1507 aaPredicted RBP25.85■■□□□ 1.73
C9orf43-202ENST00000374165 IQGAP3Q86VI3 1631 aa25.83■■□□□ 1.73
C9orf43-202ENST00000374165 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
C9orf43-202ENST00000374165 VWDEQ8N2E2 1590 aa25.81■■□□□ 1.72
C9orf43-202ENST00000374165 MLECQ14165 292 aa25.81■■□□□ 1.72
C9orf43-202ENST00000374165 ARID4BQ4LE39 1312 aaPredicted RBP25.8■■□□□ 1.72
C9orf43-202ENST00000374165 PKD2Q13563 968 aa25.8■■□□□ 1.72
C9orf43-202ENST00000374165 CEP152O94986 1710 aa25.78■■□□□ 1.72
C9orf43-202ENST00000374165 KANK1Q14678 1352 aa25.76■■□□□ 1.71
C9orf43-202ENST00000374165 WASHC2CQ9Y4E1 1318 aa25.75■■□□□ 1.71
C9orf43-202ENST00000374165 ABCC3O15438 1527 aa25.72■■□□□ 1.71
C9orf43-202ENST00000374165 E9PCH4 1651 aa25.71■■□□□ 1.71
C9orf43-202ENST00000374165 TET3O43151 1660 aa25.7■■□□□ 1.71
C9orf43-202ENST00000374165 SIN3AQ96ST3 1273 aa25.7■■□□□ 1.7
C9orf43-202ENST00000374165 CFAP65Q6ZU64 1925 aaKnown RBP25.7■■□□□ 1.7
C9orf43-202ENST00000374165 LMTK2Q8IWU2 1503 aa25.68■■□□□ 1.7
C9orf43-202ENST00000374165 ANKRD30BQ9BXX2 1392 aa25.67■■□□□ 1.7
C9orf43-202ENST00000374165 CLSPNQ9HAW4 1339 aa25.66■■□□□ 1.7
C9orf43-202ENST00000374165 EFCAB6Q5THR3 1501 aa25.66■■□□□ 1.7
C9orf43-202ENST00000374165 CLTCQ00610 1675 aaKnown RBP25.65■■□□□ 1.7
C9orf43-202ENST00000374165 CAMSAP1Q5T5Y3 1602 aa25.64■■□□□ 1.7
C9orf43-202ENST00000374165 ZC3H13Q5T200 1668 aaKnown RBP25.64■■□□□ 1.69
C9orf43-202ENST00000374165 PLA2R1Q13018 1463 aa25.63■■□□□ 1.69
C9orf43-202ENST00000374165 NPATQ14207 1427 aa25.63■■□□□ 1.69
C9orf43-202ENST00000374165 PPP6R1Q9UPN7 881 aa25.63■■□□□ 1.69
C9orf43-202ENST00000374165 NEUROD1Q13562 356 aa25.62■■□□□ 1.69
C9orf43-202ENST00000374165 FBXO31Q5XUX0 539 aaPredicted RBP25.56■■□□□ 1.68
C9orf43-202ENST00000374165 ESF1Q9H501 851 aaKnown RBP25.56■■□□□ 1.68
C9orf43-202ENST00000374165 SPHKAPQ2M3C7 1700 aa25.55■■□□□ 1.68
C9orf43-202ENST00000374165 ARHGAP31Q2M1Z3 1444 aa25.55■■□□□ 1.68
C9orf43-202ENST00000374165 FER1L4A9Z1Z3 1794 aa25.54■■□□□ 1.68
C9orf43-202ENST00000374165 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
C9orf43-202ENST00000374165 PTPRTO14522 1441 aa25.54■■□□□ 1.68
C9orf43-202ENST00000374165 RPRD2Q5VT52 1461 aaKnown RBP25.54■■□□□ 1.68
C9orf43-202ENST00000374165 MADDQ8WXG6 1647 aa25.51■■□□□ 1.67
C9orf43-202ENST00000374165 UGGT1Q9NYU2 1555 aa25.51■■□□□ 1.67
C9orf43-202ENST00000374165 ADAMTSL3P82987 1691 aa25.5■■□□□ 1.67
C9orf43-202ENST00000374165 CEBPAP49715 358 aaPredicted RBP25.5■■□□□ 1.67
C9orf43-202ENST00000374165 TRPM2O94759 1503 aa25.49■■□□□ 1.67
C9orf43-202ENST00000374165 PREX1Q8TCU6 1659 aa25.48■■□□□ 1.67
C9orf43-202ENST00000374165 NOS1P29475 1434 aa25.48■■□□□ 1.67
C9orf43-202ENST00000374165 CCDC144AA2RUR9 1427 aa25.47■■□□□ 1.67
C9orf43-202ENST00000374165 CNTLNQ9NXG0 1405 aa25.47■■□□□ 1.67
C9orf43-202ENST00000374165 MROH2AA6NES4 1674 aa25.46■■□□□ 1.67
C9orf43-202ENST00000374165 SYNMO15061 1565 aa25.46■■□□□ 1.67
C9orf43-202ENST00000374165 CLTCL1P53675 1640 aa25.46■■□□□ 1.67
C9orf43-202ENST00000374165 PLPPR3Q6T4P5 718 aa25.45■■□□□ 1.66
C9orf43-202ENST00000374165 C3P01024 1663 aa25.45■■□□□ 1.66
C9orf43-202ENST00000374165 RIMS1Q86UR5 1692 aaKnown RBP25.44■■□□□ 1.66
C9orf43-202ENST00000374165 ERVK-7P63135 1459 aa25.44■■□□□ 1.66
C9orf43-202ENST00000374165 SPATA31D1Q6ZQQ2 1576 aa25.4■■□□□ 1.66
C9orf43-202ENST00000374165 IDI1Q13907 227 aa25.39■■□□□ 1.65
C9orf43-202ENST00000374165 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
C9orf43-202ENST00000374165 RGL3Q3MIN7 710 aa25.37■■□□□ 1.65
C9orf43-202ENST00000374165 L3MBTL2Q969R5 705 aa25.37■■□□□ 1.65
C9orf43-202ENST00000374165 PIK3C2BO00750 1634 aa25.37■■□□□ 1.65
C9orf43-202ENST00000374165 SPATA31E1Q6ZUB1 1445 aa25.35■■□□□ 1.65
C9orf43-202ENST00000374165 KIF1BO60333 1816 aa25.33■■□□□ 1.65
C9orf43-202ENST00000374165 KDM4FA0A1W2PPD8 638 aa25.32■■□□□ 1.64
C9orf43-202ENST00000374165 SLC52A1Q9NWF4 448 aa25.32■■□□□ 1.64
C9orf43-202ENST00000374165 TIMELESSQ9UNS1 1208 aa25.32■■□□□ 1.64
C9orf43-202ENST00000374165 CHGAP10645 457 aaKnown RBP25.3■■□□□ 1.64
C9orf43-202ENST00000374165 TNRQ92752 1358 aa25.3■■□□□ 1.64
C9orf43-202ENST00000374165 PTPRMP28827 1452 aa25.29■■□□□ 1.64
C9orf43-202ENST00000374165 MYO5BQ9ULV0 1848 aa25.29■■□□□ 1.64
C9orf43-202ENST00000374165 PPP1R15AO75807 674 aaPredicted RBP25.27■■□□□ 1.64
C9orf43-202ENST00000374165 DCAF11Q8TEB1 546 aa25.27■■□□□ 1.64
C9orf43-202ENST00000374165 ADGRB3O60242 1522 aa25.25■■□□□ 1.63
C9orf43-202ENST00000374165 TMEM131LA2VDJ0 1609 aa25.25■■□□□ 1.63
C9orf43-202ENST00000374165 KDM2AQ9Y2K7 1162 aa25.25■■□□□ 1.63
C9orf43-202ENST00000374165 ZNF326Q5BKZ1 582 aaKnown RBP25.21■■□□□ 1.63
C9orf43-202ENST00000374165 NEURL4Q96JN8 1562 aa25.21■■□□□ 1.63
C9orf43-202ENST00000374165 SETD1BQ9UPS6 1966 aaKnown RBP25.2■■□□□ 1.62
C9orf43-202ENST00000374165 NBPF8Q3BBV2 869 aa25.2■■□□□ 1.62
C9orf43-202ENST00000374165 STAG3Q9UJ98 1225 aa25.19■■□□□ 1.62
C9orf43-202ENST00000374165 A2ML1A8K2U0 1454 aa25.18■■□□□ 1.62
C9orf43-202ENST00000374165 MYO3AQ8NEV4 1616 aa25.18■■□□□ 1.62
C9orf43-202ENST00000374165 NUTM2DQ5VT03 806 aaPredicted RBP25.17■■□□□ 1.62
C9orf43-202ENST00000374165 NLRP1Q9C000 1473 aa25.17■■□□□ 1.62
C9orf43-202ENST00000374165 UBR1Q8IWV7 1749 aa25.16■■□□□ 1.62
C9orf43-202ENST00000374165 IFT172Q9UG01 1749 aa25.16■■□□□ 1.62
C9orf43-202ENST00000374165 PPLO60437 1756 aa25.14■■□□□ 1.62
C9orf43-202ENST00000374165 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
C9orf43-202ENST00000374165 ADGRF5Q8IZF2 1346 aa25.11■■□□□ 1.61
C9orf43-202ENST00000374165 KDM5AP29375 1690 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms