RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 TPD52L1Q16890 204 aaPredicted RBP11.46□□□□□ -0.58
SPTAN1-202ENST00000372731 LRRFIP1Q32MZ4 808 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-202ENST00000372731 TSR1Q2NL82 804 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-202ENST00000372731 LTV1Q96GA3 475 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-202ENST00000372731 TDRD9Q8NDG6 1382 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-202ENST00000372731 HNRNPMP52272 730 aaKnown RBP eCLIP11.45□□□□□ -0.584e-6■■■■□ 23.6
SPTAN1-202ENST00000372731 LMOD3Q0VAK6 560 aa11.45□□□□□ -0.58
SPTAN1-202ENST00000372731 WWC2Q6AWC2 1192 aa11.45□□□□□ -0.58
SPTAN1-202ENST00000372731 FHAD1B1AJZ9 1412 aa11.44□□□□□ -0.58
SPTAN1-202ENST00000372731 SYTL4Q96C24 671 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-202ENST00000372731 PES1O00541 588 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-202ENST00000372731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.582e-7■■■■■ 86.5
SPTAN1-202ENST00000372731 U2AF1L5P0DN76 240 aaPredicted RBP11.43□□□□□ -0.58
SPTAN1-202ENST00000372731 U2AF1Q01081 240 aaKnown RBP eCLIP11.43□□□□□ -0.58
SPTAN1-202ENST00000372731 ITPRIPQ8IWB1 547 aa11.43□□□□□ -0.58
SPTAN1-202ENST00000372731 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
SPTAN1-202ENST00000372731 SYNE3Q6ZMZ3 975 aa11.43□□□□□ -0.58
SPTAN1-202ENST00000372731 R3HCC1Q9Y3T6 440 aaKnown RBP11.43□□□□□ -0.58
SPTAN1-202ENST00000372731 TTC5Q8N0Z6 440 aa11.43□□□□□ -0.58
SPTAN1-202ENST00000372731 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
SPTAN1-202ENST00000372731 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
SPTAN1-202ENST00000372731 EFCAB2Q5VUJ9 269 aa11.41□□□□□ -0.58
SPTAN1-202ENST00000372731 WASHC2CQ9Y4E1 1318 aa11.41□□□□□ -0.58
SPTAN1-202ENST00000372731 SLC4A10Q6U841 1118 aa11.41□□□□□ -0.58
SPTAN1-202ENST00000372731 CCDC146Q8IYE0 955 aa11.4□□□□□ -0.58
SPTAN1-202ENST00000372731 BAZ1AQ9NRL2 1556 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-202ENST00000372731 DHX16O60231 1041 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-202ENST00000372731 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-202ENST00000372731 KTN1Q86UP2 1357 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-202ENST00000372731 GBP4Q96PP9 640 aa11.39□□□□□ -0.59
SPTAN1-202ENST00000372731 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
SPTAN1-202ENST00000372731 ARHGAP35Q9NRY4 1499 aa11.39□□□□□ -0.59
SPTAN1-202ENST00000372731 ROCK2O75116 1388 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-202ENST00000372731 CCDC47Q96A33 483 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-202ENST00000372731 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
SPTAN1-202ENST00000372731 PPP1R1BQ9UD71 204 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-202ENST00000372731 SMC4Q9NTJ3 1288 aa11.38□□□□□ -0.59
SPTAN1-202ENST00000372731 TPM1P09493 284 aa11.37□□□□□ -0.59
SPTAN1-202ENST00000372731 PPP4R2Q9NY27 417 aa11.37□□□□□ -0.59
SPTAN1-202ENST00000372731 ATF3P18847 181 aa11.37□□□□□ -0.59
SPTAN1-202ENST00000372731 NEXNQ0ZGT2 675 aa11.37□□□□□ -0.59
SPTAN1-202ENST00000372731 RWDD1Q9H446 243 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-202ENST00000372731 H3BQV1 296 aa11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 IFFO2Q5TF58 517 aa11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 SETD5Q9C0A6 1442 aa11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 PAF1Q8N7H5 531 aa11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 KIF3BO15066 747 aa11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 CCDC70Q6NSX1 233 aa11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.36□□□□□ -0.59
SPTAN1-202ENST00000372731 ODF2Q5BJF6 829 aa11.35□□□□□ -0.59
SPTAN1-202ENST00000372731 PSME1Q06323 249 aa11.35□□□□□ -0.59
SPTAN1-202ENST00000372731 MPHOSPH9Q99550 1183 aa11.35□□□□□ -0.59
SPTAN1-202ENST00000372731 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
SPTAN1-202ENST00000372731 TRIM29Q14134 588 aa11.35□□□□□ -0.59
SPTAN1-202ENST00000372731 WIZO95785 1651 aa11.34□□□□□ -0.59
SPTAN1-202ENST00000372731 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
SPTAN1-202ENST00000372731 NUP155O75694 1391 aa11.34□□□□□ -0.59
SPTAN1-202ENST00000372731 PHF14O94880 888 aa11.33□□□□□ -0.6
SPTAN1-202ENST00000372731 TEFQ10587 303 aa11.33□□□□□ -0.6
SPTAN1-202ENST00000372731 FAM184AQ8NB25 1140 aa11.33□□□□□ -0.6
SPTAN1-202ENST00000372731 CPLX2Q6PUV4 134 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-202ENST00000372731 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
SPTAN1-202ENST00000372731 FHOD3Q2V2M9 1422 aa11.33□□□□□ -0.6
SPTAN1-202ENST00000372731 ERICH2A1L162 156 aa11.33□□□□□ -0.6
SPTAN1-202ENST00000372731 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
SPTAN1-202ENST00000372731 APPP05067 770 aa11.32□□□□□ -0.6
SPTAN1-202ENST00000372731 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
SPTAN1-202ENST00000372731 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
SPTAN1-202ENST00000372731 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
SPTAN1-202ENST00000372731 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-202ENST00000372731 ANKRD20A12PQ8NF67 263 aa11.3□□□□□ -0.6
SPTAN1-202ENST00000372731 COG3Q96JB2 828 aa11.3□□□□□ -0.6
SPTAN1-202ENST00000372731 SETQ01105 290 aaPredicted RBP11.3□□□□□ -0.6
SPTAN1-202ENST00000372731 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-202ENST00000372731 TRAK1Q9UPV9 953 aa11.3□□□□□ -0.6
SPTAN1-202ENST00000372731 HOOK1Q9UJC3 728 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-202ENST00000372731 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
SPTAN1-202ENST00000372731 ANKRD30AQ9BXX3 1397 aa11.29□□□□□ -0.6
SPTAN1-202ENST00000372731 UACAQ9BZF9 1416 aa11.29□□□□□ -0.6
SPTAN1-202ENST00000372731 IKQ13123 557 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-202ENST00000372731 DDX58O95786 925 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-202ENST00000372731 NOL8Q76FK4 1167 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-202ENST00000372731 TRDNQ13061 729 aa11.28□□□□□ -0.6
SPTAN1-202ENST00000372731 CLUAP1Q96AJ1 413 aa11.28□□□□□ -0.6
SPTAN1-202ENST00000372731 C9orf78Q9NZ63 289 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-202ENST00000372731 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-202ENST00000372731 ST18O60284 1047 aa11.28□□□□□ -0.6
SPTAN1-202ENST00000372731 IPO7O95373 1038 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-202ENST00000372731 RDXP35241 583 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-202ENST00000372731 TNNT3P45378 269 aaPredicted RBP11.27□□□□□ -0.61
SPTAN1-202ENST00000372731 EPS15P42566 896 aa11.26□□□□□ -0.61
SPTAN1-202ENST00000372731 CYB5RLQ6IPT4 315 aa11.26□□□□□ -0.61
SPTAN1-202ENST00000372731 NFXL1Q6ZNB6 911 aa11.26□□□□□ -0.61
SPTAN1-202ENST00000372731 HMGB2P26583 209 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-202ENST00000372731 WDHD1O75717 1129 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-202ENST00000372731 RRP12Q5JTH9 1297 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-202ENST00000372731 GZF1Q9H116 711 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-202ENST00000372731 GOLGA6L19H0YKK7 550 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms