RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
PCIF1-201ENST00000372409 CDC42BPBQ9Y5S2 1711 aa22.6■■□□□ 1.21
PCIF1-201ENST00000372409 FAM135AQ9P2D6 1515 aa22.6■■□□□ 1.21
PCIF1-201ENST00000372409 FANCIQ9NVI1 1328 aa22.59■■□□□ 1.21
PCIF1-201ENST00000372409 PREX2Q70Z35 1606 aa22.58■■□□□ 1.2
PCIF1-201ENST00000372409 CCDC144AA2RUR9 1427 aa22.58■■□□□ 1.2
PCIF1-201ENST00000372409 RSPH4AQ5TD94 716 aa22.57■■□□□ 1.2
PCIF1-201ENST00000372409 SYCP2Q9BX26 1530 aa22.56■■□□□ 1.2
PCIF1-201ENST00000372409 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
PCIF1-201ENST00000372409 MYBBP1AQ9BQG0 1328 aaKnown RBP22.54■■□□□ 1.2
PCIF1-201ENST00000372409 ERICH6Q7L0X2 663 aa22.54■■□□□ 1.2
PCIF1-201ENST00000372409 RALBP1Q15311 655 aa22.52■■□□□ 1.2
PCIF1-201ENST00000372409 NBPF1Q3BBV0 1214 aa22.52■■□□□ 1.2
PCIF1-201ENST00000372409 PRAG1Q86YV5 1406 aa22.5■■□□□ 1.19
PCIF1-201ENST00000372409 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
PCIF1-201ENST00000372409 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
PCIF1-201ENST00000372409 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
PCIF1-201ENST00000372409 SALL2Q9Y467 1007 aaPredicted RBP22.49■■□□□ 1.19
PCIF1-201ENST00000372409 TRPM1Q7Z4N2 1603 aa22.47■■□□□ 1.19
PCIF1-201ENST00000372409 KTN1Q86UP2 1357 aaKnown RBP22.47■■□□□ 1.19
PCIF1-201ENST00000372409 CHD1O14646 1710 aa22.47■■□□□ 1.19
PCIF1-201ENST00000372409 RNF123Q5XPI4 1314 aa22.46■■□□□ 1.19
PCIF1-201ENST00000372409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.46■■□□□ 1.19
PCIF1-201ENST00000372409 LRPPRCP42704 1394 aaKnown RBP22.46■■□□□ 1.19
PCIF1-201ENST00000372409 E9PCH4 1651 aa22.45■■□□□ 1.18
PCIF1-201ENST00000372409 PLA2R1Q13018 1463 aa22.45■■□□□ 1.18
PCIF1-201ENST00000372409 PLEKHH2Q8IVE3 1493 aa22.45■■□□□ 1.18
PCIF1-201ENST00000372409 A2MP01023 1474 aa22.43■■□□□ 1.18
PCIF1-201ENST00000372409 UNC13BO14795 1591 aa22.43■■□□□ 1.18
PCIF1-201ENST00000372409 NLRP13Q86W25 1043 aa22.43■■□□□ 1.18
PCIF1-201ENST00000372409 MAST1Q9Y2H9 1570 aa22.41■■□□□ 1.18
PCIF1-201ENST00000372409 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
PCIF1-201ENST00000372409 MYO5CQ9NQX4 1742 aa22.4■■□□□ 1.18
PCIF1-201ENST00000372409 ERCC6L2Q5T890 1561 aa22.39■■□□□ 1.17
PCIF1-201ENST00000372409 PARD3Q8TEW0 1356 aa22.38■■□□□ 1.17
PCIF1-201ENST00000372409 DISP3Q9P2K9 1392 aa22.37■■□□□ 1.17
PCIF1-201ENST00000372409 GPRASP1Q5JY77 1395 aa22.36■■□□□ 1.17
PCIF1-201ENST00000372409 IQGAP3Q86VI3 1631 aa22.36■■□□□ 1.17
PCIF1-201ENST00000372409 PER1O15534 1290 aaPredicted RBP22.36■■□□□ 1.17
PCIF1-201ENST00000372409 ABCC2Q92887 1545 aa22.36■■□□□ 1.17
PCIF1-201ENST00000372409 PLXNC1O60486 1568 aa22.35■■□□□ 1.17
PCIF1-201ENST00000372409 TESK2Q96S53 571 aa22.35■■□□□ 1.17
PCIF1-201ENST00000372409 PANK3Q9H999 370 aa22.35■■□□□ 1.17
PCIF1-201ENST00000372409 DUOX2Q9NRD8 1548 aa22.34■■□□□ 1.17
PCIF1-201ENST00000372409 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
PCIF1-201ENST00000372409 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
PCIF1-201ENST00000372409 TMF1P82094 1093 aa22.33■■□□□ 1.16
PCIF1-201ENST00000372409 ERBINQ96RT1 1412 aa22.33■■□□□ 1.16
PCIF1-201ENST00000372409 PRDM15P57071 1507 aaPredicted RBP22.33■■□□□ 1.16
PCIF1-201ENST00000372409 RRP1P56182 461 aaKnown RBP22.32■■□□□ 1.16
PCIF1-201ENST00000372409 RCAN3Q9UKA8 241 aa22.32■■□□□ 1.16
PCIF1-201ENST00000372409 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
PCIF1-201ENST00000372409 EIF2AK4Q9P2K8 1649 aaKnown RBP22.3■■□□□ 1.16
PCIF1-201ENST00000372409 EXOC6Q8TAG9 804 aa22.28■■□□□ 1.16
PCIF1-201ENST00000372409 LAMC1P11047 1609 aa22.28■■□□□ 1.16
PCIF1-201ENST00000372409 PLCH2O75038 1416 aa22.28■■□□□ 1.16
PCIF1-201ENST00000372409 CDCA7LQ96GN5 454 aa22.28■■□□□ 1.16
PCIF1-201ENST00000372409 PDE3BQ13370 1112 aa22.26■■□□□ 1.15
PCIF1-201ENST00000372409 WASHC2CQ9Y4E1 1318 aa22.26■■□□□ 1.15
PCIF1-201ENST00000372409 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
PCIF1-201ENST00000372409 ATP10AO60312 1499 aa22.24■■□□□ 1.15
PCIF1-201ENST00000372409 MAGI2Q86UL8 1455 aa22.24■■□□□ 1.15
PCIF1-201ENST00000372409 ZCCHC11Q5TAX3 1644 aaKnown RBP22.23■■□□□ 1.15
PCIF1-201ENST00000372409 SPAG9O60271 1321 aaKnown RBP22.23■■□□□ 1.15
PCIF1-201ENST00000372409 AFAP1Q8N556 730 aa22.22■■□□□ 1.15
PCIF1-201ENST00000372409 NOP58Q9Y2X3 529 aaKnown RBP22.22■■□□□ 1.15
PCIF1-201ENST00000372409 ABCC1P33527 1531 aa22.21■■□□□ 1.15
PCIF1-201ENST00000372409 ANP32AP39687 249 aaKnown RBP22.2■■□□□ 1.14
PCIF1-201ENST00000372409 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
PCIF1-201ENST00000372409 KNSTRNQ9Y448 316 aa22.18■■□□□ 1.14
PCIF1-201ENST00000372409 PLIN1O60240 522 aa22.17■■□□□ 1.14
PCIF1-201ENST00000372409 RNF17Q9BXT8 1623 aaKnown RBP22.16■■□□□ 1.14
PCIF1-201ENST00000372409 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
PCIF1-201ENST00000372409 BLMP54132 1417 aaPredicted RBP22.15■■□□□ 1.14
PCIF1-201ENST00000372409 ADAMTS8Q9UP79 889 aa22.14■■□□□ 1.13
PCIF1-201ENST00000372409 MADDQ8WXG6 1647 aa22.13■■□□□ 1.13
PCIF1-201ENST00000372409 WDR43Q15061 677 aaKnown RBP eCLIP22.12■■□□□ 1.13
PCIF1-201ENST00000372409 WDR7Q9Y4E6 1490 aa22.11■■□□□ 1.13
PCIF1-201ENST00000372409 IPO9Q96P70 1041 aaKnown RBP22.11■■□□□ 1.13
PCIF1-201ENST00000372409 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
PCIF1-201ENST00000372409 NBR1Q14596 966 aa22.1■■□□□ 1.13
PCIF1-201ENST00000372409 UHRF1BP1LA0JNW5 1464 aa22.1■■□□□ 1.13
PCIF1-201ENST00000372409 CDCA8Q53HL2 280 aa22.09■■□□□ 1.13
PCIF1-201ENST00000372409 TRPM2O94759 1503 aa22.09■■□□□ 1.13
PCIF1-201ENST00000372409 NPM2Q86SE8 214 aaKnown RBP22.09■■□□□ 1.13
PCIF1-201ENST00000372409 ZFYVE16Q7Z3T8 1539 aa22.08■■□□□ 1.13
PCIF1-201ENST00000372409 INSRP06213 1382 aa22.08■■□□□ 1.13
PCIF1-201ENST00000372409 IQGAP1P46940 1657 aa22.08■■□□□ 1.12
PCIF1-201ENST00000372409 KIF3BO15066 747 aa22.08■■□□□ 1.12
PCIF1-201ENST00000372409 BCL11AQ9H165 835 aa22.08■■□□□ 1.12
PCIF1-201ENST00000372409 SCAF11Q99590 1463 aaKnown RBP22.07■■□□□ 1.12
PCIF1-201ENST00000372409 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
PCIF1-201ENST00000372409 CLTCL1P53675 1640 aa22.07■■□□□ 1.12
PCIF1-201ENST00000372409 RTEL1-TNFRSF6BF6WH68 1400 aa22.07■■□□□ 1.12
PCIF1-201ENST00000372409 TCERG1O14776 1098 aaKnown RBP22.07■■□□□ 1.12
PCIF1-201ENST00000372409 CRBNQ96SW2 442 aa22.07■■□□□ 1.12
PCIF1-201ENST00000372409 ZBTB47Q9UFB7 747 aaPredicted RBP22.07■■□□□ 1.12
PCIF1-201ENST00000372409 ZMYM4Q5VZL5 1548 aa22.07■■□□□ 1.12
PCIF1-201ENST00000372409 KANK1Q14678 1352 aa22.07■■□□□ 1.12
PCIF1-201ENST00000372409 AMER1Q5JTC6 1135 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms