RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
LRRC39-202ENST00000370137 HSP90B1P14625 803 aaKnown RBP10.05□□□□□ -0.8
LRRC39-202ENST00000370137 PBX2P40425 430 aa10.05□□□□□ -0.8
LRRC39-202ENST00000370137 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
LRRC39-202ENST00000370137 ZMYND15Q9H091 742 aa10.05□□□□□ -0.8
LRRC39-202ENST00000370137 CHMP4AQ9BY43 222 aa10.04□□□□□ -0.8
LRRC39-202ENST00000370137 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
LRRC39-202ENST00000370137 PPP4R3BQ5MIZ7 849 aa10.03□□□□□ -0.8
LRRC39-202ENST00000370137 AXIN2Q9Y2T1 843 aa10.02□□□□□ -0.8
LRRC39-202ENST00000370137 FOSBP53539 338 aa10.01□□□□□ -0.81
LRRC39-202ENST00000370137 LSM11P83369 360 aaKnown RBP eCLIP10.01□□□□□ -0.81
LRRC39-202ENST00000370137 ARHGAP33O14559 1287 aa10□□□□□ -0.81
LRRC39-202ENST00000370137 ZNF454Q8N9F8 522 aa10□□□□□ -0.81
LRRC39-202ENST00000370137 NECTIN2Q92692 538 aa10□□□□□ -0.81
LRRC39-202ENST00000370137 DPYSL4O14531 572 aa9.99□□□□□ -0.81
LRRC39-202ENST00000370137 ANKRD13DQ6ZTN6 518 aa9.99□□□□□ -0.81
LRRC39-202ENST00000370137 JPH4Q96JJ6 628 aa9.99□□□□□ -0.81
LRRC39-202ENST00000370137 NEUROD2Q15784 382 aa9.98□□□□□ -0.81
LRRC39-202ENST00000370137 E2F4Q16254 413 aa9.97□□□□□ -0.81
LRRC39-202ENST00000370137 WDR70Q9NW82 654 aa9.97□□□□□ -0.81
LRRC39-202ENST00000370137 PSEN2P49810 448 aa9.96□□□□□ -0.82
LRRC39-202ENST00000370137 BCL2L12Q9HB09 334 aa9.96□□□□□ -0.82
LRRC39-202ENST00000370137 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
LRRC39-202ENST00000370137 ARIH1Q9Y4X5 557 aaPredicted RBP9.95□□□□□ -0.82
LRRC39-202ENST00000370137 ZDHHC16Q969W1 377 aa9.94□□□□□ -0.82
LRRC39-202ENST00000370137 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
LRRC39-202ENST00000370137 PTGER2P43116 358 aa9.93□□□□□ -0.82
LRRC39-202ENST00000370137 PCDHGA10Q9Y5H3 936 aa9.93□□□□□ -0.82
LRRC39-202ENST00000370137 PUS7Q96PZ0 661 aaKnown RBP9.92□□□□□ -0.82
LRRC39-202ENST00000370137 KCNK17Q96T54 332 aa9.92□□□□□ -0.82
LRRC39-202ENST00000370137 ADAM33Q9BZ11 813 aa9.92□□□□□ -0.82
LRRC39-202ENST00000370137 TK2O00142 265 aa9.91□□□□□ -0.82
LRRC39-202ENST00000370137 PHF14O94880 888 aa9.91□□□□□ -0.82
LRRC39-202ENST00000370137 PDIA6Q15084 440 aa9.91□□□□□ -0.82
LRRC39-202ENST00000370137 ADGRD1Q6QNK2 874 aa9.91□□□□□ -0.82
LRRC39-202ENST00000370137 MYT1LQ9UL68 1186 aa9.9□□□□□ -0.82
LRRC39-202ENST00000370137 SPDYE16A6NNV3 312 aaPredicted RBP9.89□□□□□ -0.83
LRRC39-202ENST00000370137 PTPREP23469 700 aa9.88□□□□□ -0.83
LRRC39-202ENST00000370137 TYW1BQ6NUM6 668 aa9.88□□□□□ -0.83
LRRC39-202ENST00000370137 KCNH8Q96L42 1107 aa9.88□□□□□ -0.83
LRRC39-202ENST00000370137 HRO43593 1189 aa9.88□□□□□ -0.83
LRRC39-202ENST00000370137 LMOD2Q6P5Q4 547 aa9.88□□□□□ -0.83
LRRC39-202ENST00000370137 FBXW7Q969H0 707 aa9.88□□□□□ -0.83
LRRC39-202ENST00000370137 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
LRRC39-202ENST00000370137 KCTD17Q8N5Z5 321 aa9.87□□□□□ -0.83
LRRC39-202ENST00000370137 EPAS1Q99814 870 aa9.87□□□□□ -0.83
LRRC39-202ENST00000370137 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
LRRC39-202ENST00000370137 RAD21O60216 631 aa9.85□□□□□ -0.83
LRRC39-202ENST00000370137 DDX12PQ92771 950 aa9.85□□□□□ -0.83
LRRC39-202ENST00000370137 VPS9D1Q9Y2B5 631 aa9.85□□□□□ -0.83
LRRC39-202ENST00000370137 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
LRRC39-202ENST00000370137 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
LRRC39-202ENST00000370137 PPP1R3GB7ZBB8 358 aa9.81□□□□□ -0.84
LRRC39-202ENST00000370137 COL9A1P20849 921 aa9.81□□□□□ -0.84
LRRC39-202ENST00000370137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.81□□□□□ -0.84
LRRC39-202ENST00000370137 KCNV2Q8TDN2 545 aa9.81□□□□□ -0.84
LRRC39-202ENST00000370137 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
LRRC39-202ENST00000370137 ARHGEF1Q92888 912 aaKnown RBP9.8□□□□□ -0.84
LRRC39-202ENST00000370137 BRD2P25440 801 aaKnown RBP9.79□□□□□ -0.84
LRRC39-202ENST00000370137 BHMG1C9JSJ3 638 aaPredicted RBP9.78□□□□□ -0.84
LRRC39-202ENST00000370137 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
LRRC39-202ENST00000370137 RGS22Q8NE09 1264 aa9.78□□□□□ -0.84
LRRC39-202ENST00000370137 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
LRRC39-202ENST00000370137 RBM33Q96EV2 1170 aaKnown RBP9.78□□□□□ -0.84
LRRC39-202ENST00000370137 APBB1O00213 710 aa9.77□□□□□ -0.84
LRRC39-202ENST00000370137 PRIM1P49642 420 aaKnown RBP9.76□□□□□ -0.85
LRRC39-202ENST00000370137 DHX37Q8IY37 1157 aaKnown RBP9.76□□□□□ -0.85
LRRC39-202ENST00000370137 GRXCR2A6NFK2 248 aa9.75□□□□□ -0.85
LRRC39-202ENST00000370137 PROX2Q3B8N5 592 aa9.75□□□□□ -0.85
LRRC39-202ENST00000370137 MTMR7Q9Y216 660 aa9.75□□□□□ -0.85
LRRC39-202ENST00000370137 OSBPP22059 807 aa9.74□□□□□ -0.85
LRRC39-202ENST00000370137 RBM25P49756 843 aaKnown RBP9.74□□□□□ -0.85
LRRC39-202ENST00000370137 TSR1Q2NL82 804 aaKnown RBP9.74□□□□□ -0.85
LRRC39-202ENST00000370137 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
LRRC39-202ENST00000370137 MAP3K7O43318 606 aa9.73□□□□□ -0.85
LRRC39-202ENST00000370137 P3H3Q8IVL6 736 aa9.73□□□□□ -0.85
LRRC39-202ENST00000370137 SLC24A3Q9HC58 644 aa9.73□□□□□ -0.85
LRRC39-202ENST00000370137 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
LRRC39-202ENST00000370137 ONECUT3O60422 494 aaPredicted RBP9.72□□□□□ -0.85
LRRC39-202ENST00000370137 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
LRRC39-202ENST00000370137 POLR3GLQ9BT43 218 aa9.7□□□□□ -0.86
LRRC39-202ENST00000370137 NBPF3Q9H094 633 aa9.7□□□□□ -0.86
LRRC39-202ENST00000370137 TRIM6-TRIM34B2RNG4 842 aa9.69□□□□□ -0.86
LRRC39-202ENST00000370137 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
LRRC39-202ENST00000370137 MRPL50Q8N5N7 158 aaKnown RBP9.69□□□□□ -0.86
LRRC39-202ENST00000370137 KCTD12Q96CX2 325 aaKnown RBP9.69□□□□□ -0.86
LRRC39-202ENST00000370137 FOXD4L5Q5VV16 416 aaPredicted RBP9.68□□□□□ -0.86
LRRC39-202ENST00000370137 FOXD4L4Q8WXT5 416 aaPredicted RBP9.68□□□□□ -0.86
LRRC39-202ENST00000370137 KIAA1468Q9P260 1216 aa9.68□□□□□ -0.86
LRRC39-202ENST00000370137 ZC3H15Q8WU90 426 aaKnown RBP9.67□□□□□ -0.86
LRRC39-202ENST00000370137 HCSTQ9UBK5 93 aa9.67□□□□□ -0.86
LRRC39-202ENST00000370137 TMCO4Q5TGY1 634 aa9.66□□□□□ -0.86
LRRC39-202ENST00000370137 CERKQ8TCT0 537 aa9.66□□□□□ -0.86
LRRC39-202ENST00000370137 CDHR5Q9HBB8 845 aa9.66□□□□□ -0.86
LRRC39-202ENST00000370137 FAM9AQ8IZU1 332 aaPredicted RBP9.65□□□□□ -0.86
LRRC39-202ENST00000370137 TSKSQ9UJT2 592 aa9.65□□□□□ -0.86
LRRC39-202ENST00000370137 LAPTM4BQ86VI4 370 aa9.64□□□□□ -0.87
LRRC39-202ENST00000370137 AEBP1Q8IUX7 1158 aa9.64□□□□□ -0.87
LRRC39-202ENST00000370137 GOLGA8CPA6NN73 597 aa9.63□□□□□ -0.87
LRRC39-202ENST00000370137 PRSS12P56730 875 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms