RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
RPRD2-202ENST00000369068 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
RPRD2-202ENST00000369068 NOL8Q76FK4 1167 aaKnown RBP13.24□□□□□ -0.29
RPRD2-202ENST00000369068 PKNOX2Q96KN3 472 aa13.24□□□□□ -0.29
RPRD2-202ENST00000369068 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
RPRD2-202ENST00000369068 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
RPRD2-202ENST00000369068 FOXD4L4Q8WXT5 416 aaPredicted RBP13.23□□□□□ -0.29
RPRD2-202ENST00000369068 MROH2BQ7Z745 1585 aa13.22□□□□□ -0.29
RPRD2-202ENST00000369068 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
RPRD2-202ENST00000369068 BRPF3Q9ULD4 1205 aa13.22□□□□□ -0.29
RPRD2-202ENST00000369068 RSPH4AQ5TD94 716 aa13.22□□□□□ -0.29
RPRD2-202ENST00000369068 NOC3LQ8WTT2 800 aaKnown RBP13.22□□□□□ -0.29
RPRD2-202ENST00000369068 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
RPRD2-202ENST00000369068 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
RPRD2-202ENST00000369068 STK31Q9BXU1 1019 aa13.21□□□□□ -0.29
RPRD2-202ENST00000369068 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.29
RPRD2-202ENST00000369068 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
RPRD2-202ENST00000369068 GPS2Q13227 327 aa13.21□□□□□ -0.29
RPRD2-202ENST00000369068 EIF3AQ14152 1382 aaKnown RBP13.21□□□□□ -0.3
RPRD2-202ENST00000369068 ANKRD30AQ9BXX3 1397 aa13.21□□□□□ -0.3
RPRD2-202ENST00000369068 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.3
RPRD2-202ENST00000369068 NGEFQ8N5V2 710 aa13.21□□□□□ -0.3
RPRD2-202ENST00000369068 CARMIL2Q6F5E8 1435 aa13.21□□□□□ -0.3
RPRD2-202ENST00000369068 ST20-MTHFSA0A0A6YYL1 179 aa13.2□□□□□ -0.3
RPRD2-202ENST00000369068 TPM2P07951 284 aa13.2□□□□□ -0.3
RPRD2-202ENST00000369068 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
RPRD2-202ENST00000369068 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
RPRD2-202ENST00000369068 TPM3P06753 285 aa13.2□□□□□ -0.3
RPRD2-202ENST00000369068 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
RPRD2-202ENST00000369068 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
RPRD2-202ENST00000369068 ANKRD45Q5TZF3 282 aa13.19□□□□□ -0.3
RPRD2-202ENST00000369068 BECN2A8MW95 431 aa13.19□□□□□ -0.3
RPRD2-202ENST00000369068 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
RPRD2-202ENST00000369068 NUCB2P80303 420 aa13.19□□□□□ -0.3
RPRD2-202ENST00000369068 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
RPRD2-202ENST00000369068 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
RPRD2-202ENST00000369068 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
RPRD2-202ENST00000369068 PANK3Q9H999 370 aa13.17□□□□□ -0.3
RPRD2-202ENST00000369068 LMOD3Q0VAK6 560 aa13.17□□□□□ -0.3
RPRD2-202ENST00000369068 REC8O95072 547 aa13.17□□□□□ -0.3
RPRD2-202ENST00000369068 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
RPRD2-202ENST00000369068 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
RPRD2-202ENST00000369068 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
RPRD2-202ENST00000369068 R3HCC1Q9Y3T6 440 aaKnown RBP13.16□□□□□ -0.3
RPRD2-202ENST00000369068 NASPP49321 788 aaPredicted RBP13.16□□□□□ -0.3
RPRD2-202ENST00000369068 DIAPH3Q9NSV4 1193 aa13.16□□□□□ -0.3
RPRD2-202ENST00000369068 SOX12O15370 315 aa13.16□□□□□ -0.3
RPRD2-202ENST00000369068 PDS5BQ9NTI5 1447 aa13.15□□□□□ -0.3
RPRD2-202ENST00000369068 AAMPQ13685 434 aa13.15□□□□□ -0.3
RPRD2-202ENST00000369068 ZNF592Q92610 1267 aa13.15□□□□□ -0.3
RPRD2-202ENST00000369068 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
RPRD2-202ENST00000369068 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
RPRD2-202ENST00000369068 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
RPRD2-202ENST00000369068 C22orf23Q9BZE7 217 aa13.15□□□□□ -0.3
RPRD2-202ENST00000369068 TRAK2O60296 914 aa13.14□□□□□ -0.31
RPRD2-202ENST00000369068 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
RPRD2-202ENST00000369068 A0A0U1RQG5 324 aaPredicted RBP13.14□□□□□ -0.31
RPRD2-202ENST00000369068 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
RPRD2-202ENST00000369068 RAPGEF2Q9Y4G8 1499 aa13.14□□□□□ -0.31
RPRD2-202ENST00000369068 FOXD4L6Q3SYB3 417 aaPredicted RBP13.14□□□□□ -0.31
RPRD2-202ENST00000369068 FOXD4L3Q6VB84 417 aaPredicted RBP13.14□□□□□ -0.31
RPRD2-202ENST00000369068 RRP7AQ9Y3A4 280 aaKnown RBP13.14□□□□□ -0.31
RPRD2-202ENST00000369068 USP47Q96K76 1375 aa13.13□□□□□ -0.31
RPRD2-202ENST00000369068 APAF1O14727 1248 aa13.13□□□□□ -0.31
RPRD2-202ENST00000369068 CCAR2Q8N163 923 aaKnown RBP13.13□□□□□ -0.31
RPRD2-202ENST00000369068 TERF2IPQ9NYB0 399 aa13.13□□□□□ -0.31
RPRD2-202ENST00000369068 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
RPRD2-202ENST00000369068 CCDC39Q9UFE4 941 aa13.13□□□□□ -0.31
RPRD2-202ENST00000369068 ISY1Q9ULR0 285 aaKnown RBP13.12□□□□□ -0.31
RPRD2-202ENST00000369068 STK26Q9P289 416 aa13.12□□□□□ -0.31
RPRD2-202ENST00000369068 H3BQV1 296 aa13.11□□□□□ -0.31
RPRD2-202ENST00000369068 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
RPRD2-202ENST00000369068 CCDC7Q96M83 1385 aa13.11□□□□□ -0.31
RPRD2-202ENST00000369068 DZIP1LQ8IYY4 767 aaKnown RBP13.11□□□□□ -0.31
RPRD2-202ENST00000369068 HMGN5P82970 282 aaKnown RBP13.1□□□□□ -0.31
RPRD2-202ENST00000369068 RILPL2Q969X0 211 aa13.1□□□□□ -0.31
RPRD2-202ENST00000369068 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
RPRD2-202ENST00000369068 RRP9O43818 475 aaKnown RBP13.1□□□□□ -0.31
RPRD2-202ENST00000369068 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
RPRD2-202ENST00000369068 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
RPRD2-202ENST00000369068 FAM184AQ8NB25 1140 aa13.09□□□□□ -0.31
RPRD2-202ENST00000369068 ARGLU1Q9NWB6 273 aaPredicted RBP13.09□□□□□ -0.31
RPRD2-202ENST00000369068 BACH2Q9BYV9 841 aa13.09□□□□□ -0.31
RPRD2-202ENST00000369068 CCDC66A2RUB6 948 aa13.09□□□□□ -0.31
RPRD2-202ENST00000369068 CNTLNQ9NXG0 1405 aa13.09□□□□□ -0.31
RPRD2-202ENST00000369068 CCDC173Q0VFZ6 552 aa13.08□□□□□ -0.32
RPRD2-202ENST00000369068 HOMER1Q86YM7 354 aa13.08□□□□□ -0.32
RPRD2-202ENST00000369068 TPM1P09493 284 aa13.08□□□□□ -0.32
RPRD2-202ENST00000369068 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
RPRD2-202ENST00000369068 CCDC70Q6NSX1 233 aa13.08□□□□□ -0.32
RPRD2-202ENST00000369068 IFT57Q9NWB7 429 aa13.07□□□□□ -0.32
RPRD2-202ENST00000369068 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
RPRD2-202ENST00000369068 KIF7Q2M1P5 1343 aa13.07□□□□□ -0.32
RPRD2-202ENST00000369068 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
RPRD2-202ENST00000369068 CREBRFQ8IUR6 639 aa13.06□□□□□ -0.32
RPRD2-202ENST00000369068 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
RPRD2-202ENST00000369068 MBD3O95983 291 aa13.06□□□□□ -0.32
RPRD2-202ENST00000369068 EFCAB2Q5VUJ9 269 aa13.06□□□□□ -0.32
RPRD2-202ENST00000369068 INTS3Q68E01 1043 aaKnown RBP13.06□□□□□ -0.32
RPRD2-202ENST00000369068 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms