RNA–Protein interactions for RNA: ENST00000368632.6

HDAC2-201, Transcript of histone deacetylase 2, humanhuman

TSL 2 BASIC

Gene HDAC2, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-201ENST00000368632 RSPH4AQ5TD94 716 aa27.31■■□□□ 1.96
HDAC2-201ENST00000368632 PNISRQ8TF01 805 aaKnown RBP27.3■■□□□ 1.96
HDAC2-201ENST00000368632 MSH5O43196 834 aa27.29■■□□□ 1.96
HDAC2-201ENST00000368632 TMC1Q8TDI8 760 aa27.29■■□□□ 1.96
HDAC2-201ENST00000368632 MAST1Q9Y2H9 1570 aa27.28■■□□□ 1.96
HDAC2-201ENST00000368632 KTN1Q86UP2 1357 aaKnown RBP27.28■■□□□ 1.96
HDAC2-201ENST00000368632 TRPM1Q7Z4N2 1603 aa27.28■■□□□ 1.96
HDAC2-201ENST00000368632 SYCP2Q9BX26 1530 aa27.27■■□□□ 1.96
HDAC2-201ENST00000368632 UNC13BO14795 1591 aa27.27■■□□□ 1.96
HDAC2-201ENST00000368632 CCDC144AA2RUR9 1427 aa27.26■■□□□ 1.95
HDAC2-201ENST00000368632 TTC37Q6PGP7 1564 aa27.24■■□□□ 1.95
HDAC2-201ENST00000368632 ARHGAP5Q13017 1502 aa27.24■■□□□ 1.95
HDAC2-201ENST00000368632 PRAG1Q86YV5 1406 aa27.24■■□□□ 1.95
HDAC2-201ENST00000368632 BRD4O60885 1362 aaPredicted RBP27.24■■□□□ 1.95
HDAC2-201ENST00000368632 RNF123Q5XPI4 1314 aa27.23■■□□□ 1.95
HDAC2-201ENST00000368632 MYBBP1AQ9BQG0 1328 aaKnown RBP27.23■■□□□ 1.95
HDAC2-201ENST00000368632 RALBP1Q15311 655 aa27.23■■□□□ 1.95
HDAC2-201ENST00000368632 CHD1O14646 1710 aa27.22■■□□□ 1.95
HDAC2-201ENST00000368632 LRPPRCP42704 1394 aaKnown RBP27.22■■□□□ 1.95
HDAC2-201ENST00000368632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.2■■□□□ 1.944e-25■□□□□ 8.9
HDAC2-201ENST00000368632 PLXNC1O60486 1568 aa27.19■■□□□ 1.94
HDAC2-201ENST00000368632 MYO5CQ9NQX4 1742 aa27.17■■□□□ 1.94
HDAC2-201ENST00000368632 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
HDAC2-201ENST00000368632 IQGAP3Q86VI3 1631 aa27.17■■□□□ 1.94
HDAC2-201ENST00000368632 LAMC1P11047 1609 aa27.16■■□□□ 1.94
HDAC2-201ENST00000368632 PLA2R1Q13018 1463 aa27.15■■□□□ 1.94
HDAC2-201ENST00000368632 A2MP01023 1474 aa27.14■■□□□ 1.94
HDAC2-201ENST00000368632 PLEKHH2Q8IVE3 1493 aa27.14■■□□□ 1.94
HDAC2-201ENST00000368632 GPRASP1Q5JY77 1395 aa27.13■■□□□ 1.93
HDAC2-201ENST00000368632 SENP3-EIF4A1A0A087X0R7 540 aa27.12■■□□□ 1.93
HDAC2-201ENST00000368632 RGL3Q3MIN7 710 aa27.12■■□□□ 1.93
HDAC2-201ENST00000368632 ERICH6Q7L0X2 663 aa27.11■■□□□ 1.93
HDAC2-201ENST00000368632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.11■■□□□ 1.933e-7■■■□□ 17.7
HDAC2-201ENST00000368632 ABCC2Q92887 1545 aa27.11■■□□□ 1.93
HDAC2-201ENST00000368632 PRDM15P57071 1507 aaPredicted RBP27.1■■□□□ 1.93
HDAC2-201ENST00000368632 EIF2AK4Q9P2K8 1649 aaKnown RBP27.1■■□□□ 1.93
HDAC2-201ENST00000368632 DUOX2Q9NRD8 1548 aa27.09■■□□□ 1.93
HDAC2-201ENST00000368632 PARD3Q8TEW0 1356 aa27.09■■□□□ 1.93
HDAC2-201ENST00000368632 COL17A1Q9UMD9 1497 aaPredicted RBP27.08■■□□□ 1.93
HDAC2-201ENST00000368632 NBPF1Q3BBV0 1214 aa27.08■■□□□ 1.93
HDAC2-201ENST00000368632 CCDC136Q96JN2 1154 aa27.08■■□□□ 1.93
HDAC2-201ENST00000368632 NLRP13Q86W25 1043 aa27.07■■□□□ 1.92
HDAC2-201ENST00000368632 MAGI2Q86UL8 1455 aa27.06■■□□□ 1.92
HDAC2-201ENST00000368632 ERBINQ96RT1 1412 aa27.04■■□□□ 1.92
HDAC2-201ENST00000368632 ATP10AO60312 1499 aa27.04■■□□□ 1.92
HDAC2-201ENST00000368632 ERCC6L2Q5T890 1561 aa27.02■■□□□ 1.92
HDAC2-201ENST00000368632 PER1O15534 1290 aaPredicted RBP27.01■■□□□ 1.91
HDAC2-201ENST00000368632 DISP3Q9P2K9 1392 aa27■■□□□ 1.91
HDAC2-201ENST00000368632 TESK2Q96S53 571 aa26.98■■□□□ 1.91
HDAC2-201ENST00000368632 WASHC2CQ9Y4E1 1318 aa26.98■■□□□ 1.91
HDAC2-201ENST00000368632 RNF17Q9BXT8 1623 aaKnown RBP26.97■■□□□ 1.91
HDAC2-201ENST00000368632 PLCH2O75038 1416 aa26.96■■□□□ 1.91
HDAC2-201ENST00000368632 RRP1P56182 461 aaKnown RBP26.95■■□□□ 1.9
HDAC2-201ENST00000368632 ZCCHC11Q5TAX3 1644 aaKnown RBP26.95■■□□□ 1.9
HDAC2-201ENST00000368632 ABCC1P33527 1531 aa26.94■■□□□ 1.9
HDAC2-201ENST00000368632 PDE3BQ13370 1112 aa26.94■■□□□ 1.9
HDAC2-201ENST00000368632 TMF1P82094 1093 aa26.93■■□□□ 1.9
HDAC2-201ENST00000368632 RCAN3Q9UKA8 241 aa26.91■■□□□ 1.9
HDAC2-201ENST00000368632 CC2D1BQ5T0F9 858 aaKnown RBP26.9■■□□□ 1.9
HDAC2-201ENST00000368632 EFCAB2Q5VUJ9 269 aa26.9■■□□□ 1.9
HDAC2-201ENST00000368632 INSRP06213 1382 aa26.9■■□□□ 1.9
HDAC2-201ENST00000368632 ZMYM4Q5VZL5 1548 aa26.9■■□□□ 1.9
HDAC2-201ENST00000368632 PANK3Q9H999 370 aa26.89■■□□□ 1.9
HDAC2-201ENST00000368632 SALL2Q9Y467 1007 aaPredicted RBP26.89■■□□□ 1.9
HDAC2-201ENST00000368632 BLMP54132 1417 aaPredicted RBP26.87■■□□□ 1.89
HDAC2-201ENST00000368632 MADDQ8WXG6 1647 aa26.86■■□□□ 1.89
HDAC2-201ENST00000368632 TRAPPC8Q9Y2L5 1435 aa26.86■■□□□ 1.89
HDAC2-201ENST00000368632 UHRF1BP1LA0JNW5 1464 aa26.85■■□□□ 1.89
HDAC2-201ENST00000368632 IQGAP1P46940 1657 aa26.83■■□□□ 1.89
HDAC2-201ENST00000368632 EXOC6Q8TAG9 804 aa26.83■■□□□ 1.89
HDAC2-201ENST00000368632 TRPM2O94759 1503 aa26.82■■□□□ 1.88
HDAC2-201ENST00000368632 NOP58Q9Y2X3 529 aaKnown RBP26.81■■□□□ 1.88
HDAC2-201ENST00000368632 CEP152O94986 1710 aa26.8■■□□□ 1.88
HDAC2-201ENST00000368632 SPHKAPQ2M3C7 1700 aa26.8■■□□□ 1.88
HDAC2-201ENST00000368632 CLASP1Q7Z460 1538 aa26.79■■□□□ 1.88
HDAC2-201ENST00000368632 ZFYVE16Q7Z3T8 1539 aa26.78■■□□□ 1.88
HDAC2-201ENST00000368632 RTEL1-TNFRSF6BF6WH68 1400 aa26.78■■□□□ 1.88
HDAC2-201ENST00000368632 CDCA7LQ96GN5 454 aa26.78■■□□□ 1.88
HDAC2-201ENST00000368632 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
HDAC2-201ENST00000368632 WDR7Q9Y4E6 1490 aa26.77■■□□□ 1.88
HDAC2-201ENST00000368632 ANP32AP39687 249 aaKnown RBP26.77■■□□□ 1.88
HDAC2-201ENST00000368632 ARAP3Q8WWN8 1544 aa26.77■■□□□ 1.88
HDAC2-201ENST00000368632 DEPDC5O75140 1603 aa26.75■■□□□ 1.87
HDAC2-201ENST00000368632 CLTCL1P53675 1640 aa26.74■■□□□ 1.87
HDAC2-201ENST00000368632 SYNMO15061 1565 aa26.73■■□□□ 1.87
HDAC2-201ENST00000368632 PTPRTO14522 1441 aa26.72■■□□□ 1.87
HDAC2-201ENST00000368632 MYT1LQ9UL68 1186 aa26.72■■□□□ 1.87
HDAC2-201ENST00000368632 SCAF11Q99590 1463 aaKnown RBP26.72■■□□□ 1.87
HDAC2-201ENST00000368632 TET3O43151 1660 aa26.72■■□□□ 1.87
HDAC2-201ENST00000368632 SCAPERQ9BY12 1400 aa26.71■■□□□ 1.87
HDAC2-201ENST00000368632 STAC3Q96MF2 364 aa26.71■■□□□ 1.87
HDAC2-201ENST00000368632 IPO9Q96P70 1041 aaKnown RBP26.7■■□□□ 1.86
HDAC2-201ENST00000368632 KNSTRNQ9Y448 316 aa26.7■■□□□ 1.86
HDAC2-201ENST00000368632 TCERG1O14776 1098 aaKnown RBP26.69■■□□□ 1.86
HDAC2-201ENST00000368632 CDCA8Q53HL2 280 aa26.69■■□□□ 1.86
HDAC2-201ENST00000368632 AFAP1Q8N556 730 aa26.69■■□□□ 1.86
HDAC2-201ENST00000368632 PAK3O75914 559 aaPredicted RBP26.68■■□□□ 1.86
HDAC2-201ENST00000368632 ADAMTS8Q9UP79 889 aa26.66■■□□□ 1.86
HDAC2-201ENST00000368632 INO80Q9ULG1 1556 aaPredicted RBP26.65■■□□□ 1.86
HDAC2-201ENST00000368632 PPP2R1AP30153 589 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms