RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 MTUS2Q5JR59 1369 aa13.28□□□□□ -0.28
ATF3-206ENST00000366987 CDK11BP21127 795 aaKnown RBP13.28□□□□□ -0.28
ATF3-206ENST00000366987 ANP32BQ92688 251 aaKnown RBP13.28□□□□□ -0.28
ATF3-206ENST00000366987 KIF14Q15058 1648 aa13.27□□□□□ -0.28
ATF3-206ENST00000366987 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.28
ATF3-206ENST00000366987 MAGI3Q5TCQ9 1506 aa13.27□□□□□ -0.29
ATF3-206ENST00000366987 L1TD1Q5T7N2 865 aaKnown RBP13.27□□□□□ -0.29
ATF3-206ENST00000366987 FRAT1Q92837 279 aaPredicted RBP13.27□□□□□ -0.29
ATF3-206ENST00000366987 RRAGDQ9NQL2 400 aaPredicted RBP13.25□□□□□ -0.29
ATF3-206ENST00000366987 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
ATF3-206ENST00000366987 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
ATF3-206ENST00000366987 TAF3Q5VWG9 929 aa13.23□□□□□ -0.29
ATF3-206ENST00000366987 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
ATF3-206ENST00000366987 SENP3Q9H4L4 574 aaPredicted RBP13.23□□□□□ -0.29
ATF3-206ENST00000366987 KANK4Q5T7N3 995 aaPredicted RBP13.21□□□□□ -0.29
ATF3-206ENST00000366987 GLI2P10070 1586 aa13.21□□□□□ -0.29
ATF3-206ENST00000366987 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.29
ATF3-206ENST00000366987 SECISBP2LQ93073 1101 aaKnown RBP13.21□□□□□ -0.3
ATF3-206ENST00000366987 DIP2BQ9P265 1576 aa13.21□□□□□ -0.3
ATF3-206ENST00000366987 ARID3AQ99856 593 aa13.2□□□□□ -0.3
ATF3-206ENST00000366987 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
ATF3-206ENST00000366987 ITSN2Q9NZM3 1697 aa13.2□□□□□ -0.3
ATF3-206ENST00000366987 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
ATF3-206ENST00000366987 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
ATF3-206ENST00000366987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■■□ 23.9
ATF3-206ENST00000366987 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
ATF3-206ENST00000366987 TNNT2P45379 298 aaPredicted RBP13.19□□□□□ -0.3
ATF3-206ENST00000366987 TERF1P54274 439 aa13.19□□□□□ -0.3
ATF3-206ENST00000366987 KIF13AQ9H1H9 1805 aa13.18□□□□□ -0.3
ATF3-206ENST00000366987 TAOK2Q9UL54 1235 aa13.18□□□□□ -0.3
ATF3-206ENST00000366987 TTC37Q6PGP7 1564 aa13.18□□□□□ -0.3
ATF3-206ENST00000366987 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
ATF3-206ENST00000366987 CDC42BPAQ5VT25 1732 aa13.16□□□□□ -0.3
ATF3-206ENST00000366987 MAP3K4Q9Y6R4 1608 aa13.16□□□□□ -0.3
ATF3-206ENST00000366987 KIF20AO95235 890 aa13.16□□□□□ -0.3
ATF3-206ENST00000366987 NFKBIBQ15653 356 aa13.16□□□□□ -0.3
ATF3-206ENST00000366987 PREX2Q70Z35 1606 aa13.16□□□□□ -0.3
ATF3-206ENST00000366987 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
ATF3-206ENST00000366987 TMEM51Q9NW97 253 aa13.15□□□□□ -0.3
ATF3-206ENST00000366987 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
ATF3-206ENST00000366987 ARAP3Q8WWN8 1544 aa13.15□□□□□ -0.3
ATF3-206ENST00000366987 CCNB3Q8WWL7 1395 aa13.15□□□□□ -0.3
ATF3-206ENST00000366987 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
ATF3-206ENST00000366987 CLGNO14967 610 aa13.13□□□□□ -0.31
ATF3-206ENST00000366987 DMTNQ08495 405 aa13.13□□□□□ -0.31
ATF3-206ENST00000366987 MYOM3Q5VTT5 1437 aa13.13□□□□□ -0.31
ATF3-206ENST00000366987 CDC42BPBQ9Y5S2 1711 aa13.12□□□□□ -0.31
ATF3-206ENST00000366987 GPATCH8Q9UKJ3 1502 aaKnown RBP13.12□□□□□ -0.31
ATF3-206ENST00000366987 FAM69CQ0P6D2 419 aa13.12□□□□□ -0.31
ATF3-206ENST00000366987 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
ATF3-206ENST00000366987 PLCH2O75038 1416 aa13.11□□□□□ -0.31
ATF3-206ENST00000366987 PHLDB1Q86UU1 1377 aa13.11□□□□□ -0.31
ATF3-206ENST00000366987 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
ATF3-206ENST00000366987 PTMSP20962 102 aa13.1□□□□□ -0.31
ATF3-206ENST00000366987 MMP14P50281 582 aa13.1□□□□□ -0.31
ATF3-206ENST00000366987 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
ATF3-206ENST00000366987 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
ATF3-206ENST00000366987 AXDND1Q5T1B0 1012 aaPredicted RBP13.09□□□□□ -0.31
ATF3-206ENST00000366987 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
ATF3-206ENST00000366987 ZNF830Q96NB3 372 aaPredicted RBP13.09□□□□□ -0.31
ATF3-206ENST00000366987 TSPOAP1O95153 1857 aa13.08□□□□□ -0.31
ATF3-206ENST00000366987 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
ATF3-206ENST00000366987 PTMAP06454 111 aaKnown RBP13.08□□□□□ -0.32
ATF3-206ENST00000366987 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
ATF3-206ENST00000366987 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
ATF3-206ENST00000366987 GTPBP4Q9BZE4 634 aaKnown RBP13.08□□□□□ -0.32
ATF3-206ENST00000366987 FGD6Q6ZV73 1430 aa13.08□□□□□ -0.32
ATF3-206ENST00000366987 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
ATF3-206ENST00000366987 PPRC1Q5VV67 1664 aaKnown RBP13.07□□□□□ -0.32
ATF3-206ENST00000366987 PTPN23Q9H3S7 1636 aa13.07□□□□□ -0.32
ATF3-206ENST00000366987 TCERG1O14776 1098 aaKnown RBP13.07□□□□□ -0.32
ATF3-206ENST00000366987 MS4A1P11836 297 aa13.07□□□□□ -0.32
ATF3-206ENST00000366987 SLC20A2Q08357 652 aa13.07□□□□□ -0.32
ATF3-206ENST00000366987 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
ATF3-206ENST00000366987 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
ATF3-206ENST00000366987 ANP32CO43423 234 aa13.06□□□□□ -0.32
ATF3-206ENST00000366987 LETM1O95202 739 aaPredicted RBP13.06□□□□□ -0.32
ATF3-206ENST00000366987 FANCAO15360 1455 aa13.06□□□□□ -0.32
ATF3-206ENST00000366987 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
ATF3-206ENST00000366987 NEO1Q92859 1461 aa13.06□□□□□ -0.32
ATF3-206ENST00000366987 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
ATF3-206ENST00000366987 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
ATF3-206ENST00000366987 TRIM44Q96DX7 344 aaPredicted RBP13.05□□□□□ -0.32
ATF3-206ENST00000366987 RRBP1Q9P2E9 1410 aaKnown RBP13.05□□□□□ -0.32
ATF3-206ENST00000366987 B4GALNT3Q6L9W6 998 aa13.05□□□□□ -0.32
ATF3-206ENST00000366987 ZNF622Q969S3 477 aaKnown RBP eCLIP13.05□□□□□ -0.329e-7■■□□□ 11.8
ATF3-206ENST00000366987 TCOF1Q13428 1488 aaKnown RBP13.05□□□□□ -0.32
ATF3-206ENST00000366987 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
ATF3-206ENST00000366987 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
ATF3-206ENST00000366987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.03□□□□□ -0.326e-7■□□□□ 11.3
ATF3-206ENST00000366987 ABCC1P33527 1531 aa13.02□□□□□ -0.32
ATF3-206ENST00000366987 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
ATF3-206ENST00000366987 CNPY4Q8N129 248 aa13.01□□□□□ -0.33
ATF3-206ENST00000366987 AKNAQ7Z591 1439 aa13.01□□□□□ -0.33
ATF3-206ENST00000366987 KIAA1107Q9UPP5 1409 aa13.01□□□□□ -0.33
ATF3-206ENST00000366987 ARHGEF5Q12774 1597 aa13□□□□□ -0.33
ATF3-206ENST00000366987 ADGRL1O94910 1474 aa13□□□□□ -0.33
ATF3-206ENST00000366987 TICAM2Q86XR7 235 aa13□□□□□ -0.33
ATF3-206ENST00000366987 ZNF777Q9ULD5 760 aaPredicted RBP13□□□□□ -0.33
ATF3-206ENST00000366987 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms