RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PCDHGA10Q9Y5H3 936 aa15.63■□□□□ 0.09
H3F3A-201ENST00000366813 PHF14O94880 888 aa15.61■□□□□ 0.09
H3F3A-201ENST00000366813 TYW1BQ6NUM6 668 aa15.61■□□□□ 0.09
H3F3A-201ENST00000366813 E2F4Q16254 413 aa15.59■□□□□ 0.09
H3F3A-201ENST00000366813 FBXW7Q969H0 707 aa15.59■□□□□ 0.09
H3F3A-201ENST00000366813 SLC4A5Q9BY07 1137 aa15.59■□□□□ 0.09
H3F3A-201ENST00000366813 PLCB2Q00722 1185 aa15.58■□□□□ 0.08
H3F3A-201ENST00000366813 SHROOM4Q9ULL8 1493 aa15.57■□□□□ 0.08
H3F3A-201ENST00000366813 HCSTQ9UBK5 93 aa15.56■□□□□ 0.08
H3F3A-201ENST00000366813 EPAS1Q99814 870 aa15.55■□□□□ 0.08
H3F3A-201ENST00000366813 ZBED2Q9BTP6 218 aa15.55■□□□□ 0.08
H3F3A-201ENST00000366813 KCTD12Q96CX2 325 aaKnown RBP15.54■□□□□ 0.08
H3F3A-201ENST00000366813 DDX12PQ92771 950 aa15.53■□□□□ 0.08
H3F3A-201ENST00000366813 CUX2O14529 1486 aa15.53■□□□□ 0.08
H3F3A-201ENST00000366813 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
H3F3A-201ENST00000366813 GOLGA8CPA6NN73 597 aa15.51■□□□□ 0.07
H3F3A-201ENST00000366813 SPDYE16A6NNV3 312 aaPredicted RBP15.5■□□□□ 0.07
H3F3A-201ENST00000366813 PPP1R3GB7ZBB8 358 aa15.5■□□□□ 0.07
H3F3A-201ENST00000366813 RBM33Q96EV2 1170 aaKnown RBP15.49■□□□□ 0.07
H3F3A-201ENST00000366813 MRPL50Q8N5N7 158 aaKnown RBP15.48■□□□□ 0.07
H3F3A-201ENST00000366813 PDIA6Q15084 440 aa15.46■□□□□ 0.07
H3F3A-201ENST00000366813 C6orf132Q5T0Z8 1188 aa15.46■□□□□ 0.07
H3F3A-201ENST00000366813 NBPF3Q9H094 633 aa15.46■□□□□ 0.07
H3F3A-201ENST00000366813 BHMG1C9JSJ3 638 aaPredicted RBP15.45■□□□□ 0.06
H3F3A-201ENST00000366813 COL9A1P20849 921 aa15.45■□□□□ 0.06
H3F3A-201ENST00000366813 TSHZ2Q9NRE2 1034 aa15.45■□□□□ 0.06
H3F3A-201ENST00000366813 NBR1Q14596 966 aa15.43■□□□□ 0.06
H3F3A-201ENST00000366813 PROX2Q3B8N5 592 aa15.43■□□□□ 0.06
H3F3A-201ENST00000366813 PTPN5P54829 565 aa15.41■□□□□ 0.06
H3F3A-201ENST00000366813 RABGEF1Q9UJ41 708 aa15.41■□□□□ 0.06
H3F3A-201ENST00000366813 ARIH1Q9Y4X5 557 aaPredicted RBP15.41■□□□□ 0.06
H3F3A-201ENST00000366813 MAP3K7O43318 606 aa15.4■□□□□ 0.06
H3F3A-201ENST00000366813 GRXCR2A6NFK2 248 aa15.39■□□□□ 0.05
H3F3A-201ENST00000366813 WNT2BQ93097 391 aa15.39■□□□□ 0.05
H3F3A-201ENST00000366813 PLA2G2EQ9NZK7 142 aa15.36■□□□□ 0.05
H3F3A-201ENST00000366813 KIAA1468Q9P260 1216 aa15.36■□□□□ 0.05
H3F3A-201ENST00000366813 EN1Q05925 392 aaPredicted RBP15.35■□□□□ 0.05
H3F3A-201ENST00000366813 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
H3F3A-201ENST00000366813 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
H3F3A-201ENST00000366813 HAP1P54257 671 aaPredicted RBP15.32■□□□□ 0.04
H3F3A-201ENST00000366813 THSD4Q6ZMP0 1018 aa15.32■□□□□ 0.04
H3F3A-201ENST00000366813 SCRIBQ14160 1630 aa15.32■□□□□ 0.04
H3F3A-201ENST00000366813 TSR1Q2NL82 804 aaKnown RBP15.31■□□□□ 0.04
H3F3A-201ENST00000366813 TRIM6-TRIM34B2RNG4 842 aa15.29■□□□□ 0.04
H3F3A-201ENST00000366813 LAPTM4BQ86VI4 370 aa15.28■□□□□ 0.04
H3F3A-201ENST00000366813 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
H3F3A-201ENST00000366813 PACS2Q86VP3 889 aa15.26■□□□□ 0.03
H3F3A-201ENST00000366813 ARHGEF1Q92888 912 aaKnown RBP15.24■□□□□ 0.03
H3F3A-201ENST00000366813 SEPT9Q9UHD8 586 aaPredicted RBP15.24■□□□□ 0.03
H3F3A-201ENST00000366813 CERKQ8TCT0 537 aa15.23■□□□□ 0.03
H3F3A-201ENST00000366813 ZFRQ96KR1 1074 aaKnown RBP15.22■□□□□ 0.03
H3F3A-201ENST00000366813 OSBPP22059 807 aa15.21■□□□□ 0.03
H3F3A-201ENST00000366813 PRIM1P49642 420 aaKnown RBP15.19■□□□□ 0.02
H3F3A-201ENST00000366813 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
H3F3A-201ENST00000366813 PRSS12P56730 875 aa15.18■□□□□ 0.02
H3F3A-201ENST00000366813 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
H3F3A-201ENST00000366813 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
H3F3A-201ENST00000366813 KCNV2Q8TDN2 545 aa15.17■□□□□ 0.02
H3F3A-201ENST00000366813 BCAMP50895 628 aa15.17■□□□□ 0.02
H3F3A-201ENST00000366813 SOWAHBA6NEL2 793 aa15.16■□□□□ 0.02
H3F3A-201ENST00000366813 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
H3F3A-201ENST00000366813 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
H3F3A-201ENST00000366813 CDHR5Q9HBB8 845 aa15.12■□□□□ 0.01
H3F3A-201ENST00000366813 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.12■□□□□ 0.01
H3F3A-201ENST00000366813 LRCH3Q96II8 777 aa15.11■□□□□ 0.01
H3F3A-201ENST00000366813 SMAPO00193 183 aa15.1■□□□□ 0.01
H3F3A-201ENST00000366813 MLLT3P42568 568 aaPredicted RBP15.09■□□□□ 0.01
H3F3A-201ENST00000366813 PNMA3Q9UL41 463 aa15.09■□□□□ 0.01
H3F3A-201ENST00000366813 NBPF26B4DH59 902 aa15.08■□□□□ 0
H3F3A-201ENST00000366813 TATDN2Q93075 761 aa15.08■□□□□ 0
H3F3A-201ENST00000366813 WBP1LQ9NX94 342 aa15.07■□□□□ 0
H3F3A-201ENST00000366813 FAM198AQ9UFP1 575 aa15.07■□□□□ 0
H3F3A-201ENST00000366813 NYAP1Q6ZVC0 841 aa15.06■□□□□ 0
H3F3A-201ENST00000366813 TSR3Q9UJK0 312 aaKnown RBP15.05■□□□□ -0
H3F3A-201ENST00000366813 HPS5Q9UPZ3 1129 aa15.05■□□□□ -0
H3F3A-201ENST00000366813 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
H3F3A-201ENST00000366813 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
H3F3A-201ENST00000366813 NUDT18Q6ZVK8 323 aa15.03■□□□□ -0
H3F3A-201ENST00000366813 RBM27Q9P2N5 1060 aaKnown RBP15.03■□□□□ -0
H3F3A-201ENST00000366813 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02■□□□□ -0
H3F3A-201ENST00000366813 PPP4CP60510 307 aa15.02■□□□□ -0
H3F3A-201ENST00000366813 KDM2AQ9Y2K7 1162 aa15.02■□□□□ -0
H3F3A-201ENST00000366813 NPDC1Q9NQX5 325 aaPredicted RBP15.01□□□□□ -0.01
H3F3A-201ENST00000366813 NESP48681 1621 aa15□□□□□ -0.01
H3F3A-201ENST00000366813 IFFO2Q5TF58 517 aa15□□□□□ -0.01
H3F3A-201ENST00000366813 SAMD7Q7Z3H4 446 aa15□□□□□ -0.01
H3F3A-201ENST00000366813 PADI6Q6TGC4 694 aa14.99□□□□□ -0.01
H3F3A-201ENST00000366813 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
H3F3A-201ENST00000366813 C3orf80F5H4A9 247 aa14.97□□□□□ -0.01
H3F3A-201ENST00000366813 SEMA3EO15041 775 aa14.96□□□□□ -0.01
H3F3A-201ENST00000366813 TTC13Q8NBP0 860 aa14.94□□□□□ -0.02
H3F3A-201ENST00000366813 RNF40O75150 1001 aa14.92□□□□□ -0.02
H3F3A-201ENST00000366813 ITGBL1O95965 494 aaPredicted RBP14.92□□□□□ -0.02
H3F3A-201ENST00000366813 KCNC4Q03721 635 aa14.92□□□□□ -0.02
H3F3A-201ENST00000366813 THOC2Q8NI27 1593 aaKnown RBP14.91□□□□□ -0.02
H3F3A-201ENST00000366813 PTGDRQ13258 359 aa14.91□□□□□ -0.02
H3F3A-201ENST00000366813 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
H3F3A-201ENST00000366813 A0A0G2JS52 829 aa14.9□□□□□ -0.02
H3F3A-201ENST00000366813 SMYD5Q6GMV2 418 aa14.89□□□□□ -0.03
H3F3A-201ENST00000366813 SLC4A3P48751 1232 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms