RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
PARP1-203ENST00000366794 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
PARP1-203ENST00000366794 NUTM2FA1L443 756 aa18.54■□□□□ 0.56
PARP1-203ENST00000366794 NOP58Q9Y2X3 529 aaKnown RBP18.54■□□□□ 0.56
PARP1-203ENST00000366794 MIA2Q96PC5 1412 aa18.54■□□□□ 0.56
PARP1-203ENST00000366794 CFAP70Q5T0N1 1121 aa18.54■□□□□ 0.56
PARP1-203ENST00000366794 KANK1Q14678 1352 aa18.54■□□□□ 0.56
PARP1-203ENST00000366794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.54■□□□□ 0.56
PARP1-203ENST00000366794 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
PARP1-203ENST00000366794 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.56
PARP1-203ENST00000366794 HECW1Q76N89 1606 aa18.52■□□□□ 0.56
PARP1-203ENST00000366794 RSPH4AQ5TD94 716 aa18.52■□□□□ 0.55
PARP1-203ENST00000366794 APAF1O14727 1248 aa18.51■□□□□ 0.55
PARP1-203ENST00000366794 KIAA1107Q9UPP5 1409 aa18.51■□□□□ 0.55
PARP1-203ENST00000366794 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
PARP1-203ENST00000366794 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
PARP1-203ENST00000366794 SLC4A3P48751 1232 aa18.49■□□□□ 0.55
PARP1-203ENST00000366794 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
PARP1-203ENST00000366794 KIF21AQ7Z4S6 1674 aa18.49■□□□□ 0.55
PARP1-203ENST00000366794 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
PARP1-203ENST00000366794 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
PARP1-203ENST00000366794 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
PARP1-203ENST00000366794 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
PARP1-203ENST00000366794 NCOA1Q15788 1441 aa18.47■□□□□ 0.55
PARP1-203ENST00000366794 RTN4Q9NQC3 1192 aaKnown RBP18.46■□□□□ 0.55
PARP1-203ENST00000366794 ARHGAP5Q13017 1502 aa18.46■□□□□ 0.55
PARP1-203ENST00000366794 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.55
PARP1-203ENST00000366794 RRP1P56182 461 aaKnown RBP18.46■□□□□ 0.55
PARP1-203ENST00000366794 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
PARP1-203ENST00000366794 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
PARP1-203ENST00000366794 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
PARP1-203ENST00000366794 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
PARP1-203ENST00000366794 FTSJ3Q8IY81 847 aaKnown RBP18.43■□□□□ 0.54
PARP1-203ENST00000366794 MAGI3Q5TCQ9 1506 aa18.43■□□□□ 0.54
PARP1-203ENST00000366794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
PARP1-203ENST00000366794 RAPGEF3O95398 923 aa18.42■□□□□ 0.54
PARP1-203ENST00000366794 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
PARP1-203ENST00000366794 MAPK8IP3Q9UPT6 1336 aa18.4■□□□□ 0.54
PARP1-203ENST00000366794 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
PARP1-203ENST00000366794 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.53
PARP1-203ENST00000366794 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
PARP1-203ENST00000366794 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
PARP1-203ENST00000366794 MAGI1Q96QZ7 1491 aaPredicted RBP18.39■□□□□ 0.53
PARP1-203ENST00000366794 ELL2O00472 640 aaPredicted RBP18.37■□□□□ 0.53
PARP1-203ENST00000366794 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
PARP1-203ENST00000366794 UPF2Q9HAU5 1272 aaKnown RBP18.37■□□□□ 0.53
PARP1-203ENST00000366794 SLC12A5Q9H2X9 1139 aa18.36■□□□□ 0.53
PARP1-203ENST00000366794 HSP90AA1P07900 732 aaKnown RBP18.36■□□□□ 0.53
PARP1-203ENST00000366794 COG6Q9Y2V7 657 aa18.36■□□□□ 0.53
PARP1-203ENST00000366794 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
PARP1-203ENST00000366794 ROCK1Q13464 1354 aa18.35■□□□□ 0.53
PARP1-203ENST00000366794 DEKP35659 375 aaKnown RBP18.35■□□□□ 0.53
PARP1-203ENST00000366794 ERICH6BQ5W0A0 696 aa18.35■□□□□ 0.53
PARP1-203ENST00000366794 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
PARP1-203ENST00000366794 ATP10BO94823 1461 aa18.34■□□□□ 0.53
PARP1-203ENST00000366794 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
PARP1-203ENST00000366794 MSH5O43196 834 aa18.33■□□□□ 0.52
PARP1-203ENST00000366794 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.52
PARP1-203ENST00000366794 PDE4AP27815 886 aa18.32■□□□□ 0.52
PARP1-203ENST00000366794 APBB1O00213 710 aa18.32■□□□□ 0.52
PARP1-203ENST00000366794 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
PARP1-203ENST00000366794 GGNBP2Q9H3C7 697 aa18.31■□□□□ 0.52
PARP1-203ENST00000366794 CFAP43Q8NDM7 1665 aa18.31■□□□□ 0.52
PARP1-203ENST00000366794 PLEKHH2Q8IVE3 1493 aa18.3■□□□□ 0.52
PARP1-203ENST00000366794 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
PARP1-203ENST00000366794 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
PARP1-203ENST00000366794 C20orf194Q5TEA3 1177 aa18.29■□□□□ 0.52
PARP1-203ENST00000366794 SLKQ9H2G2 1235 aaPredicted RBP18.29■□□□□ 0.52
PARP1-203ENST00000366794 KDM6BO15054 1643 aa18.28■□□□□ 0.52
PARP1-203ENST00000366794 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
PARP1-203ENST00000366794 PANK1Q8TE04 598 aa18.27■□□□□ 0.52
PARP1-203ENST00000366794 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
PARP1-203ENST00000366794 BCAR3O75815 825 aa18.27■□□□□ 0.52
PARP1-203ENST00000366794 PDE3BQ13370 1112 aa18.27■□□□□ 0.51
PARP1-203ENST00000366794 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
PARP1-203ENST00000366794 FAM69CQ0P6D2 419 aa18.25■□□□□ 0.51
PARP1-203ENST00000366794 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
PARP1-203ENST00000366794 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
PARP1-203ENST00000366794 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
PARP1-203ENST00000366794 MTHFSP49914 203 aa18.24■□□□□ 0.51
PARP1-203ENST00000366794 WDR62O43379 1518 aa18.24■□□□□ 0.51
PARP1-203ENST00000366794 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
PARP1-203ENST00000366794 TPRNQ4KMQ1 711 aa18.23■□□□□ 0.51
PARP1-203ENST00000366794 SMC4Q9NTJ3 1288 aa18.23■□□□□ 0.51
PARP1-203ENST00000366794 DISP3Q9P2K9 1392 aa18.23■□□□□ 0.51
PARP1-203ENST00000366794 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
PARP1-203ENST00000366794 ADGRF5Q8IZF2 1346 aa18.22■□□□□ 0.51
PARP1-203ENST00000366794 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
PARP1-203ENST00000366794 EIF5BO60841 1220 aaKnown RBP18.2■□□□□ 0.5
PARP1-203ENST00000366794 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
PARP1-203ENST00000366794 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
PARP1-203ENST00000366794 KIAA0556O60303 1618 aa18.2■□□□□ 0.5
PARP1-203ENST00000366794 DDRGK1Q96HY6 314 aa18.19■□□□□ 0.5
PARP1-203ENST00000366794 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
PARP1-203ENST00000366794 HMOX1P09601 288 aa18.19■□□□□ 0.5
PARP1-203ENST00000366794 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
PARP1-203ENST00000366794 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
PARP1-203ENST00000366794 TCP11L2Q8N4U5 519 aa18.17■□□□□ 0.5
PARP1-203ENST00000366794 FANCIQ9NVI1 1328 aa18.16■□□□□ 0.5
PARP1-203ENST00000366794 PZPP20742 1482 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms