RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 E9PSI1 815 aa14.89□□□□□ -0.03
CDC42BPA-202ENST00000366764 DDX11L8A8MPP1 907 aa14.88□□□□□ -0.03
CDC42BPA-202ENST00000366764 SYAP1Q96A49 352 aaPredicted RBP14.88□□□□□ -0.03
CDC42BPA-202ENST00000366764 HDGFP51858 240 aaKnown RBP14.88□□□□□ -0.03
CDC42BPA-202ENST00000366764 RSPH6AQ9H0K4 717 aa14.87□□□□□ -0.03
CDC42BPA-202ENST00000366764 PCF11O94913 1555 aaKnown RBP14.87□□□□□ -0.03
CDC42BPA-202ENST00000366764 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
CDC42BPA-202ENST00000366764 HDGFL2Q7Z4V5 671 aaPredicted RBP14.86□□□□□ -0.03
CDC42BPA-202ENST00000366764 TERF2IPQ9NYB0 399 aa14.85□□□□□ -0.03
CDC42BPA-202ENST00000366764 PTPN23Q9H3S7 1636 aa14.85□□□□□ -0.03
CDC42BPA-202ENST00000366764 ANKRD50Q9ULJ7 1429 aa14.84□□□□□ -0.03
CDC42BPA-202ENST00000366764 GSE1Q14687 1217 aa14.84□□□□□ -0.03
CDC42BPA-202ENST00000366764 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
CDC42BPA-202ENST00000366764 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.035e-7■■■■□ 23.8
CDC42BPA-202ENST00000366764 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
CDC42BPA-202ENST00000366764 SRPK2P78362 688 aaKnown RBP14.84□□□□□ -0.03
CDC42BPA-202ENST00000366764 THOC2Q8NI27 1593 aaKnown RBP14.83□□□□□ -0.03
CDC42BPA-202ENST00000366764 LMOD3Q0VAK6 560 aa14.83□□□□□ -0.04
CDC42BPA-202ENST00000366764 SPAG9O60271 1321 aaKnown RBP14.82□□□□□ -0.04
CDC42BPA-202ENST00000366764 SMG6Q86US8 1419 aaKnown RBP14.82□□□□□ -0.04
CDC42BPA-202ENST00000366764 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
CDC42BPA-202ENST00000366764 ROCK1Q13464 1354 aa14.81□□□□□ -0.04
CDC42BPA-202ENST00000366764 GRIN2BQ13224 1484 aa14.81□□□□□ -0.04
CDC42BPA-202ENST00000366764 SLKQ9H2G2 1235 aaPredicted RBP14.81□□□□□ -0.04
CDC42BPA-202ENST00000366764 PANK3Q9H999 370 aa14.81□□□□□ -0.04
CDC42BPA-202ENST00000366764 SKOR2Q2VWA4 1001 aaPredicted RBP14.81□□□□□ -0.04
CDC42BPA-202ENST00000366764 CTTNBP2Q8WZ74 1663 aa14.8□□□□□ -0.04
CDC42BPA-202ENST00000366764 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
CDC42BPA-202ENST00000366764 SCAPERQ9BY12 1400 aa14.8□□□□□ -0.04
CDC42BPA-202ENST00000366764 HMMRO75330 724 aa14.8□□□□□ -0.04
CDC42BPA-202ENST00000366764 CFAP43Q8NDM7 1665 aa14.79□□□□□ -0.04
CDC42BPA-202ENST00000366764 SMC4Q9NTJ3 1288 aa14.79□□□□□ -0.04
CDC42BPA-202ENST00000366764 NINLQ9Y2I6 1382 aa14.79□□□□□ -0.04
CDC42BPA-202ENST00000366764 ABCA10Q8WWZ4 1543 aa14.79□□□□□ -0.04
CDC42BPA-202ENST00000366764 PHF14O94880 888 aa14.79□□□□□ -0.04
CDC42BPA-202ENST00000366764 KIAA2012Q0VF49 1180 aa14.79□□□□□ -0.04
CDC42BPA-202ENST00000366764 KIAA1107Q9UPP5 1409 aa14.78□□□□□ -0.04
CDC42BPA-202ENST00000366764 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
CDC42BPA-202ENST00000366764 BICRAQ9NZM4 1560 aa14.78□□□□□ -0.04
CDC42BPA-202ENST00000366764 HDAC5Q9UQL6 1122 aa14.78□□□□□ -0.04
CDC42BPA-202ENST00000366764 GOLGA6L4A6NEF3 574 aa14.78□□□□□ -0.04
CDC42BPA-202ENST00000366764 PLEKHH2Q8IVE3 1493 aa14.77□□□□□ -0.04
CDC42BPA-202ENST00000366764 IQGAP2Q13576 1575 aa14.77□□□□□ -0.05
CDC42BPA-202ENST00000366764 NAIPQ13075 1403 aa14.77□□□□□ -0.05
CDC42BPA-202ENST00000366764 EXOC6Q8TAG9 804 aa14.76□□□□□ -0.05
CDC42BPA-202ENST00000366764 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.055e-11■■■■■ 37.4
CDC42BPA-202ENST00000366764 AKNAQ7Z591 1439 aa14.76□□□□□ -0.05
CDC42BPA-202ENST00000366764 PTPRGP23470 1445 aa14.76□□□□□ -0.05
CDC42BPA-202ENST00000366764 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
CDC42BPA-202ENST00000366764 KIAA1211Q6ZU35 1233 aa14.75□□□□□ -0.05
CDC42BPA-202ENST00000366764 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
CDC42BPA-202ENST00000366764 KCNJ4P48050 445 aa14.75□□□□□ -0.05
CDC42BPA-202ENST00000366764 OS9Q13438 667 aaPredicted RBP14.74□□□□□ -0.05
CDC42BPA-202ENST00000366764 ST18O60284 1047 aa14.74□□□□□ -0.05
CDC42BPA-202ENST00000366764 CSPP1Q1MSJ5 1256 aa14.74□□□□□ -0.05
CDC42BPA-202ENST00000366764 ZKSCAN2Q63HK3 967 aa14.74□□□□□ -0.05
CDC42BPA-202ENST00000366764 HTATSF1O43719 755 aaKnown RBP14.73□□□□□ -0.05
CDC42BPA-202ENST00000366764 CRBNQ96SW2 442 aa14.73□□□□□ -0.05
CDC42BPA-202ENST00000366764 RTF1Q92541 710 aaKnown RBP14.73□□□□□ -0.05
CDC42BPA-202ENST00000366764 ITSN2Q9NZM3 1697 aa14.72□□□□□ -0.05
CDC42BPA-202ENST00000366764 MFAP1P55081 439 aaKnown RBP14.71□□□□□ -0.05
CDC42BPA-202ENST00000366764 FGD1P98174 961 aa14.71□□□□□ -0.05
CDC42BPA-202ENST00000366764 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
CDC42BPA-202ENST00000366764 C9orf84Q5VXU9 1444 aa14.71□□□□□ -0.05
CDC42BPA-202ENST00000366764 EVC2Q86UK5 1308 aa14.71□□□□□ -0.05
CDC42BPA-202ENST00000366764 EPRSP07814 1512 aaKnown RBP14.71□□□□□ -0.05
CDC42BPA-202ENST00000366764 TROQ12816 1431 aaPredicted RBP14.71□□□□□ -0.05
CDC42BPA-202ENST00000366764 SYNJ2O15056 1496 aa14.71□□□□□ -0.06
CDC42BPA-202ENST00000366764 DAPK1P53355 1430 aa14.7□□□□□ -0.06
CDC42BPA-202ENST00000366764 LAMC3Q9Y6N6 1575 aa14.7□□□□□ -0.06
CDC42BPA-202ENST00000366764 C14orf37Q86TY3 774 aa14.7□□□□□ -0.06
CDC42BPA-202ENST00000366764 KIF16BQ96L93 1317 aa14.69□□□□□ -0.06
CDC42BPA-202ENST00000366764 KIF3BO15066 747 aa14.68□□□□□ -0.06
CDC42BPA-202ENST00000366764 GPATCH3Q96I76 525 aa14.68□□□□□ -0.06
CDC42BPA-202ENST00000366764 GZF1Q9H116 711 aaPredicted RBP14.68□□□□□ -0.06
CDC42BPA-202ENST00000366764 SPRYD3Q8NCJ5 442 aa14.68□□□□□ -0.06
CDC42BPA-202ENST00000366764 CCDC146Q8IYE0 955 aa14.67□□□□□ -0.06
CDC42BPA-202ENST00000366764 STK31Q9BXU1 1019 aa14.67□□□□□ -0.06
CDC42BPA-202ENST00000366764 CDK11BP21127 795 aaKnown RBP14.66□□□□□ -0.06
CDC42BPA-202ENST00000366764 PNISRQ8TF01 805 aaKnown RBP14.66□□□□□ -0.06
CDC42BPA-202ENST00000366764 ATP6V1DQ9Y5K8 247 aa14.66□□□□□ -0.06
CDC42BPA-202ENST00000366764 IFT140Q96RY7 1462 aa14.65□□□□□ -0.06
CDC42BPA-202ENST00000366764 ARHGAP5Q13017 1502 aa14.65□□□□□ -0.06
CDC42BPA-202ENST00000366764 VGFO15240 615 aaPredicted RBP14.65□□□□□ -0.06
CDC42BPA-202ENST00000366764 REC8O95072 547 aa14.65□□□□□ -0.06
CDC42BPA-202ENST00000366764 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
CDC42BPA-202ENST00000366764 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
CDC42BPA-202ENST00000366764 NCOA1Q15788 1441 aa14.64□□□□□ -0.07
CDC42BPA-202ENST00000366764 RUNDC1Q96C34 613 aa14.64□□□□□ -0.07
CDC42BPA-202ENST00000366764 CLUAP1Q96AJ1 413 aa14.64□□□□□ -0.07
CDC42BPA-202ENST00000366764 PLCB2Q00722 1185 aa14.64□□□□□ -0.07
CDC42BPA-202ENST00000366764 PLIN1O60240 522 aa14.63□□□□□ -0.07
CDC42BPA-202ENST00000366764 PDE3AQ14432 1141 aa14.63□□□□□ -0.07
CDC42BPA-202ENST00000366764 CCDC141Q6ZP82 1450 aa14.63□□□□□ -0.07
CDC42BPA-202ENST00000366764 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
CDC42BPA-202ENST00000366764 GGT6Q6P531 493 aa14.63□□□□□ -0.07
CDC42BPA-202ENST00000366764 NESP48681 1621 aa14.63□□□□□ -0.07
CDC42BPA-202ENST00000366764 KIF14Q15058 1648 aa14.63□□□□□ -0.07
CDC42BPA-202ENST00000366764 CT47B1P0C2W7 299 aaPredicted RBP14.62□□□□□ -0.07
CDC42BPA-202ENST00000366764 DZIP1LQ8IYY4 767 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms