RNA–Protein interactions for RNA: ENST00000366576.3

MTR-201, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 1 (best)

Gene MTR, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-201ENST00000366576 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
MTR-201ENST00000366576 KIF15Q9NS87 1388 aa13.38□□□□□ -0.27
MTR-201ENST00000366576 KIF16BQ96L93 1317 aa13.37□□□□□ -0.27
MTR-201ENST00000366576 NOC3LQ8WTT2 800 aaKnown RBP13.37□□□□□ -0.27
MTR-201ENST00000366576 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
MTR-201ENST00000366576 CHMP4CQ96CF2 233 aa13.36□□□□□ -0.27
MTR-201ENST00000366576 RASSF8Q8NHQ8 419 aa13.36□□□□□ -0.27
MTR-201ENST00000366576 USP35Q9P2H5 1018 aa13.36□□□□□ -0.27
MTR-201ENST00000366576 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
MTR-201ENST00000366576 ST20-MTHFSA0A0A6YYL1 179 aa13.35□□□□□ -0.27
MTR-201ENST00000366576 CENPQQ7L2Z9 268 aaPredicted RBP13.35□□□□□ -0.27
MTR-201ENST00000366576 SF3A1Q15459 793 aaKnown RBP13.35□□□□□ -0.27
MTR-201ENST00000366576 CCDC18Q5T9S5 1454 aa13.35□□□□□ -0.27
MTR-201ENST00000366576 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
MTR-201ENST00000366576 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
MTR-201ENST00000366576 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
MTR-201ENST00000366576 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.28
MTR-201ENST00000366576 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
MTR-201ENST00000366576 E9PSI1 815 aa13.32□□□□□ -0.28
MTR-201ENST00000366576 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
MTR-201ENST00000366576 PANK3Q9H999 370 aa13.32□□□□□ -0.28
MTR-201ENST00000366576 TOMM22Q9NS69 142 aa13.32□□□□□ -0.28
MTR-201ENST00000366576 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
MTR-201ENST00000366576 FAM161AQ3B820 660 aa13.32□□□□□ -0.28
MTR-201ENST00000366576 ZKSCAN2Q63HK3 967 aa13.32□□□□□ -0.28
MTR-201ENST00000366576 TPM3P06753 285 aa13.32□□□□□ -0.28
MTR-201ENST00000366576 NGEFQ8N5V2 710 aa13.32□□□□□ -0.28
MTR-201ENST00000366576 GOLGA6L1Q8N7Z2 621 aa13.32□□□□□ -0.28
MTR-201ENST00000366576 LTV1Q96GA3 475 aaPredicted RBP13.32□□□□□ -0.28
MTR-201ENST00000366576 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
MTR-201ENST00000366576 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
MTR-201ENST00000366576 FRAT2O75474 233 aaPredicted RBP13.31□□□□□ -0.28
MTR-201ENST00000366576 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
MTR-201ENST00000366576 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
MTR-201ENST00000366576 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
MTR-201ENST00000366576 SMARCA2P51531 1590 aa13.31□□□□□ -0.28
MTR-201ENST00000366576 VGFO15240 615 aaPredicted RBP13.3□□□□□ -0.28
MTR-201ENST00000366576 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
MTR-201ENST00000366576 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
MTR-201ENST00000366576 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
MTR-201ENST00000366576 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
MTR-201ENST00000366576 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
MTR-201ENST00000366576 FHOD3Q2V2M9 1422 aa13.29□□□□□ -0.28
MTR-201ENST00000366576 PDE4AP27815 886 aa13.29□□□□□ -0.28
MTR-201ENST00000366576 ANKRD45Q5TZF3 282 aa13.29□□□□□ -0.28
MTR-201ENST00000366576 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
MTR-201ENST00000366576 G3V3G9 751 aa13.29□□□□□ -0.28
MTR-201ENST00000366576 SKOR2Q2VWA4 1001 aaPredicted RBP13.29□□□□□ -0.28
MTR-201ENST00000366576 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
MTR-201ENST00000366576 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
MTR-201ENST00000366576 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
MTR-201ENST00000366576 COG3Q96JB2 828 aa13.28□□□□□ -0.28
MTR-201ENST00000366576 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
MTR-201ENST00000366576 TNNT3P45378 269 aaPredicted RBP13.28□□□□□ -0.28
MTR-201ENST00000366576 ZBED9Q6R2W3 1325 aa13.28□□□□□ -0.28
MTR-201ENST00000366576 NUTM2FA1L443 756 aa13.27□□□□□ -0.28
MTR-201ENST00000366576 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.28
MTR-201ENST00000366576 RILPL2Q969X0 211 aa13.27□□□□□ -0.28
MTR-201ENST00000366576 ARID3AQ99856 593 aa13.27□□□□□ -0.28
MTR-201ENST00000366576 EVC2Q86UK5 1308 aa13.27□□□□□ -0.28
MTR-201ENST00000366576 H3BQV1 296 aa13.27□□□□□ -0.28
MTR-201ENST00000366576 IFFO2Q5TF58 517 aa13.27□□□□□ -0.28
MTR-201ENST00000366576 CPLX2Q6PUV4 134 aaKnown RBP13.27□□□□□ -0.28
MTR-201ENST00000366576 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.28
MTR-201ENST00000366576 MARCH6O60337 910 aa13.27□□□□□ -0.29
MTR-201ENST00000366576 TEFQ10587 303 aa13.27□□□□□ -0.29
MTR-201ENST00000366576 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.29
MTR-201ENST00000366576 BCL2L13Q9BXK5 485 aa13.27□□□□□ -0.29
MTR-201ENST00000366576 A0A0U1RQG5 324 aaPredicted RBP13.26□□□□□ -0.29
MTR-201ENST00000366576 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
MTR-201ENST00000366576 REC8O95072 547 aa13.26□□□□□ -0.29
MTR-201ENST00000366576 BECN2A8MW95 431 aa13.25□□□□□ -0.29
MTR-201ENST00000366576 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
MTR-201ENST00000366576 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
MTR-201ENST00000366576 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
MTR-201ENST00000366576 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
MTR-201ENST00000366576 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
MTR-201ENST00000366576 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
MTR-201ENST00000366576 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
MTR-201ENST00000366576 AKAP17AQ02040 695 aaKnown RBP13.24□□□□□ -0.29
MTR-201ENST00000366576 COG6Q9Y2V7 657 aa13.24□□□□□ -0.29
MTR-201ENST00000366576 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
MTR-201ENST00000366576 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
MTR-201ENST00000366576 DIAPH3Q9NSV4 1193 aa13.24□□□□□ -0.29
MTR-201ENST00000366576 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
MTR-201ENST00000366576 APAF1O14727 1248 aa13.24□□□□□ -0.29
MTR-201ENST00000366576 ZKSCAN1P17029 563 aaPredicted RBP13.23□□□□□ -0.29
MTR-201ENST00000366576 EXOC6Q8TAG9 804 aa13.23□□□□□ -0.29
MTR-201ENST00000366576 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
MTR-201ENST00000366576 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
MTR-201ENST00000366576 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
MTR-201ENST00000366576 PLIN1O60240 522 aa13.22□□□□□ -0.29
MTR-201ENST00000366576 TPD52L1Q16890 204 aaPredicted RBP13.22□□□□□ -0.29
MTR-201ENST00000366576 USP47Q96K76 1375 aa13.22□□□□□ -0.29
MTR-201ENST00000366576 TPM1P09493 284 aa13.21□□□□□ -0.29
MTR-201ENST00000366576 CRBNQ96SW2 442 aa13.21□□□□□ -0.29
MTR-201ENST00000366576 GSE1Q14687 1217 aa13.21□□□□□ -0.29
MTR-201ENST00000366576 PES1O00541 588 aaKnown RBP13.21□□□□□ -0.29
MTR-201ENST00000366576 C9orf78Q9NZ63 289 aaPredicted RBP13.21□□□□□ -0.3
MTR-201ENST00000366576 DIAPH1O60610 1272 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms