RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 C6orf132Q5T0Z8 1188 aa7.89□□□□□ -1.15
RNU4-48P-201ENST00000365559 KCNK17Q96T54 332 aa7.89□□□□□ -1.15
RNU4-48P-201ENST00000365559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.88□□□□□ -1.15
RNU4-48P-201ENST00000365559 CDHR5Q9HBB8 845 aa7.88□□□□□ -1.15
RNU4-48P-201ENST00000365559 ARHGAP33O14559 1287 aa7.87□□□□□ -1.15
RNU4-48P-201ENST00000365559 COL9A1P20849 921 aa7.87□□□□□ -1.15
RNU4-48P-201ENST00000365559 PTPREP23469 700 aa7.87□□□□□ -1.15
RNU4-48P-201ENST00000365559 CDAN1Q8IWY9 1227 aa7.87□□□□□ -1.15
RNU4-48P-201ENST00000365559 TULP1O00294 542 aaPredicted RBP7.86□□□□□ -1.15
RNU4-48P-201ENST00000365559 PBX2P40425 430 aa7.86□□□□□ -1.15
RNU4-48P-201ENST00000365559 DMRTA1Q5VZB9 504 aa7.86□□□□□ -1.15
RNU4-48P-201ENST00000365559 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
RNU4-48P-201ENST00000365559 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
RNU4-48P-201ENST00000365559 NUTM2FA1L443 756 aa7.85□□□□□ -1.15
RNU4-48P-201ENST00000365559 LMOD2Q6P5Q4 547 aa7.85□□□□□ -1.15
RNU4-48P-201ENST00000365559 NPDC1Q9NQX5 325 aaPredicted RBP7.84□□□□□ -1.15
RNU4-48P-201ENST00000365559 PPP1R3GB7ZBB8 358 aa7.83□□□□□ -1.16
RNU4-48P-201ENST00000365559 LSM11P83369 360 aaKnown RBP eCLIP7.82□□□□□ -1.16
RNU4-48P-201ENST00000365559 KCNH8Q96L42 1107 aa7.82□□□□□ -1.16
RNU4-48P-201ENST00000365559 GPR37O15354 613 aa7.81□□□□□ -1.16
RNU4-48P-201ENST00000365559 PTGDRQ13258 359 aa7.81□□□□□ -1.16
RNU4-48P-201ENST00000365559 GPIHBP1Q8IV16 184 aa7.81□□□□□ -1.16
RNU4-48P-201ENST00000365559 ZBED2Q9BTP6 218 aa7.81□□□□□ -1.16
RNU4-48P-201ENST00000365559 PROX2Q3B8N5 592 aa7.8□□□□□ -1.16
RNU4-48P-201ENST00000365559 FCHSD2O94868 740 aa7.79□□□□□ -1.16
RNU4-48P-201ENST00000365559 ANKRD13DQ6ZTN6 518 aa7.79□□□□□ -1.16
RNU4-48P-201ENST00000365559 CERKQ8TCT0 537 aa7.78□□□□□ -1.16
RNU4-48P-201ENST00000365559 PRSS12P56730 875 aa7.77□□□□□ -1.17
RNU4-48P-201ENST00000365559 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
RNU4-48P-201ENST00000365559 CDCA7LQ96GN5 454 aa7.77□□□□□ -1.17
RNU4-48P-201ENST00000365559 SLC4A5Q9BY07 1137 aa7.77□□□□□ -1.17
RNU4-48P-201ENST00000365559 PCDH10Q9P2E7 1040 aa7.77□□□□□ -1.17
RNU4-48P-201ENST00000365559 FAM198AQ9UFP1 575 aa7.77□□□□□ -1.17
RNU4-48P-201ENST00000365559 VPS9D1Q9Y2B5 631 aa7.77□□□□□ -1.17
RNU4-48P-201ENST00000365559 TK2O00142 265 aa7.76□□□□□ -1.17
RNU4-48P-201ENST00000365559 FECHP22830 423 aa7.76□□□□□ -1.17
RNU4-48P-201ENST00000365559 PADI6Q6TGC4 694 aa7.76□□□□□ -1.17
RNU4-48P-201ENST00000365559 ZC3H15Q8WU90 426 aaKnown RBP7.76□□□□□ -1.17
RNU4-48P-201ENST00000365559 TSKSQ9UJT2 592 aa7.76□□□□□ -1.17
RNU4-48P-201ENST00000365559 TRIM6-TRIM34B2RNG4 842 aa7.75□□□□□ -1.17
RNU4-48P-201ENST00000365559 HIC1Q14526 733 aa7.75□□□□□ -1.17
RNU4-48P-201ENST00000365559 C3orf80F5H4A9 247 aa7.74□□□□□ -1.17
RNU4-48P-201ENST00000365559 GNPATO15228 680 aa7.74□□□□□ -1.17
RNU4-48P-201ENST00000365559 TTC13Q8NBP0 860 aa7.74□□□□□ -1.17
RNU4-48P-201ENST00000365559 KIAA1468Q9P260 1216 aa7.74□□□□□ -1.17
RNU4-48P-201ENST00000365559 RBM27Q9P2N5 1060 aaKnown RBP7.74□□□□□ -1.17
RNU4-48P-201ENST00000365559 HRO43593 1189 aa7.73□□□□□ -1.17
RNU4-48P-201ENST00000365559 BHMG1C9JSJ3 638 aaPredicted RBP7.72□□□□□ -1.17
RNU4-48P-201ENST00000365559 ONECUT3O60422 494 aaPredicted RBP7.72□□□□□ -1.17
RNU4-48P-201ENST00000365559 ZMYND10O75800 440 aa7.72□□□□□ -1.17
RNU4-48P-201ENST00000365559 FAM161AQ3B820 660 aa7.72□□□□□ -1.17
RNU4-48P-201ENST00000365559 RABGEF1Q9UJ41 708 aa7.72□□□□□ -1.17
RNU4-48P-201ENST00000365559 PACS2Q86VP3 889 aa7.71□□□□□ -1.18
RNU4-48P-201ENST00000365559 SEPT9Q9UHD8 586 aaPredicted RBP7.7□□□□□ -1.18
RNU4-48P-201ENST00000365559 SMAPO00193 183 aa7.69□□□□□ -1.18
RNU4-48P-201ENST00000365559 BARGINQ6ZT62 677 aa7.69□□□□□ -1.18
RNU4-48P-201ENST00000365559 NUDT18Q6ZVK8 323 aa7.69□□□□□ -1.18
RNU4-48P-201ENST00000365559 ADGRG1Q9Y653 693 aa7.69□□□□□ -1.18
RNU4-48P-201ENST00000365559 SPNS2Q8IVW8 549 aa7.68□□□□□ -1.18
RNU4-48P-201ENST00000365559 TATDN2Q93075 761 aa7.68□□□□□ -1.18
RNU4-48P-201ENST00000365559 PNMA3Q9UL41 463 aa7.68□□□□□ -1.18
RNU4-48P-201ENST00000365559 NBPF26B4DH59 902 aa7.67□□□□□ -1.18
RNU4-48P-201ENST00000365559 MAP2K5Q13163 448 aa7.67□□□□□ -1.18
RNU4-48P-201ENST00000365559 NBPF3Q9H094 633 aa7.67□□□□□ -1.18
RNU4-48P-201ENST00000365559 IRF6O14896 467 aa7.66□□□□□ -1.18
RNU4-48P-201ENST00000365559 TPRNQ4KMQ1 711 aa7.66□□□□□ -1.18
RNU4-48P-201ENST00000365559 MRPL50Q8N5N7 158 aaKnown RBP7.66□□□□□ -1.18
RNU4-48P-201ENST00000365559 EYA1Q99502 592 aa7.66□□□□□ -1.18
RNU4-48P-201ENST00000365559 MINK1Q8N4C8 1332 aaPredicted RBP7.65□□□□□ -1.18
RNU4-48P-201ENST00000365559 KRI1Q8N9T8 703 aaKnown RBP7.65□□□□□ -1.18
RNU4-48P-201ENST00000365559 STAC3Q96MF2 364 aa7.65□□□□□ -1.18
RNU4-48P-201ENST00000365559 FAM98CQ17RN3 349 aaKnown RBP7.64□□□□□ -1.19
RNU4-48P-201ENST00000365559 METTL3Q86U44 580 aaKnown RBP7.64□□□□□ -1.19
RNU4-48P-201ENST00000365559 LAPTM4BQ86VI4 370 aa7.64□□□□□ -1.19
RNU4-48P-201ENST00000365559 PXYLP1Q8TE99 480 aa7.64□□□□□ -1.19
RNU4-48P-201ENST00000365559 CCDC102AQ96A19 550 aa7.64□□□□□ -1.19
RNU4-48P-201ENST00000365559 OATP04181 439 aa7.63□□□□□ -1.19
RNU4-48P-201ENST00000365559 PRKCSHP14314 528 aaPredicted RBP7.63□□□□□ -1.19
RNU4-48P-201ENST00000365559 RBM46Q8TBY0 533 aaKnown RBP7.63□□□□□ -1.19
RNU4-48P-201ENST00000365559 PHOX2BQ99453 314 aa7.63□□□□□ -1.19
RNU4-48P-201ENST00000365559 SLC24A3Q9HC58 644 aa7.63□□□□□ -1.19
RNU4-48P-201ENST00000365559 NLRP7Q8WX94 980 aa7.62□□□□□ -1.19
RNU4-48P-201ENST00000365559 ZFRQ96KR1 1074 aaKnown RBP7.62□□□□□ -1.19
RNU4-48P-201ENST00000365559 MYT1LQ9UL68 1186 aa7.62□□□□□ -1.19
RNU4-48P-201ENST00000365559 RCCD1A6NED2 376 aa7.61□□□□□ -1.19
RNU4-48P-201ENST00000365559 GOLGA8CPA6NN73 597 aa7.6□□□□□ -1.19
RNU4-48P-201ENST00000365559 MMRN1Q13201 1228 aa7.6□□□□□ -1.19
RNU4-48P-201ENST00000365559 DNAJB2P25686 324 aa7.59□□□□□ -1.19
RNU4-48P-201ENST00000365559 SAMD7Q7Z3H4 446 aa7.59□□□□□ -1.19
RNU4-48P-201ENST00000365559 WNT2BQ93097 391 aa7.59□□□□□ -1.19
RNU4-48P-201ENST00000365559 KCTD12Q96CX2 325 aaKnown RBP7.59□□□□□ -1.19
RNU4-48P-201ENST00000365559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.58□□□□□ -1.2
RNU4-48P-201ENST00000365559 AK7Q96M32 723 aa7.58□□□□□ -1.2
RNU4-48P-201ENST00000365559 TMEM134Q9H6X4 195 aa7.58□□□□□ -1.2
RNU4-48P-201ENST00000365559 BCAMP50895 628 aa7.57□□□□□ -1.2
RNU4-48P-201ENST00000365559 SWT1Q5T5J6 900 aaKnown RBP7.57□□□□□ -1.2
RNU4-48P-201ENST00000365559 ANKK1Q8NFD2 765 aa7.57□□□□□ -1.2
RNU4-48P-201ENST00000365559 RNF166Q96A37 237 aaPredicted RBP7.57□□□□□ -1.2
RNU4-48P-201ENST00000365559 TRIM66O15016 1216 aa7.56□□□□□ -1.2
RNU4-48P-201ENST00000365559 SOWAHBA6NEL2 793 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms