RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 FAM135AQ9P2D6 1515 aa30.44■■■□□ 2.46
MAP1LC3A-201ENST00000360668 IQGAP3Q86VI3 1631 aa30.43■■■□□ 2.46
MAP1LC3A-201ENST00000360668 RAPGEF3O95398 923 aa30.41■■■□□ 2.46
MAP1LC3A-201ENST00000360668 PKD2Q13563 968 aa30.41■■■□□ 2.46
MAP1LC3A-201ENST00000360668 FOXD1Q16676 465 aa30.41■■■□□ 2.46
MAP1LC3A-201ENST00000360668 DEPDC5O75140 1603 aa30.4■■■□□ 2.46
MAP1LC3A-201ENST00000360668 FRMPD1Q5SYB0 1578 aa30.39■■■□□ 2.46
MAP1LC3A-201ENST00000360668 A2MP01023 1474 aa30.38■■■□□ 2.45
MAP1LC3A-201ENST00000360668 ZMYM4Q5VZL5 1548 aa30.36■■■□□ 2.45
MAP1LC3A-201ENST00000360668 ABCA6Q8N139 1617 aa30.36■■■□□ 2.45
MAP1LC3A-201ENST00000360668 AEBP2Q6ZN18 517 aaPredicted RBP30.36■■■□□ 2.45
MAP1LC3A-201ENST00000360668 TONSLQ96HA7 1378 aa30.34■■■□□ 2.45
MAP1LC3A-201ENST00000360668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.34■■■□□ 2.45
MAP1LC3A-201ENST00000360668 DIP2CQ9Y2E4 1556 aa30.32■■■□□ 2.44
MAP1LC3A-201ENST00000360668 RPRD2Q5VT52 1461 aaKnown RBP30.31■■■□□ 2.44
MAP1LC3A-201ENST00000360668 KDM4FA0A1W2PPD8 638 aa30.3■■■□□ 2.44
MAP1LC3A-201ENST00000360668 BCORL1Q5H9F3 1711 aa30.29■■■□□ 2.44
MAP1LC3A-201ENST00000360668 PRDM15P57071 1507 aaPredicted RBP30.29■■■□□ 2.44
MAP1LC3A-201ENST00000360668 KIF3BO15066 747 aa30.28■■■□□ 2.44
MAP1LC3A-201ENST00000360668 VWDEQ8N2E2 1590 aa30.28■■■□□ 2.44
MAP1LC3A-201ENST00000360668 RNF17Q9BXT8 1623 aaKnown RBP30.27■■■□□ 2.44
MAP1LC3A-201ENST00000360668 MROH1Q8NDA8 1641 aa30.26■■■□□ 2.43
MAP1LC3A-201ENST00000360668 KANK1Q14678 1352 aa30.26■■■□□ 2.43
MAP1LC3A-201ENST00000360668 PPP1R15AO75807 674 aaPredicted RBP30.24■■■□□ 2.43
MAP1LC3A-201ENST00000360668 YEATS2Q9ULM3 1422 aa30.22■■■□□ 2.43
MAP1LC3A-201ENST00000360668 TET3O43151 1660 aa30.2■■■□□ 2.43
MAP1LC3A-201ENST00000360668 ATP10AO60312 1499 aa30.17■■■□□ 2.42
MAP1LC3A-201ENST00000360668 LMTK2Q8IWU2 1503 aa30.15■■■□□ 2.42
MAP1LC3A-201ENST00000360668 E9PCH4 1651 aa30.14■■■□□ 2.42
MAP1LC3A-201ENST00000360668 REREQ9P2R6 1566 aa30.14■■■□□ 2.42
MAP1LC3A-201ENST00000360668 PLA2R1Q13018 1463 aa30.12■■■□□ 2.41
MAP1LC3A-201ENST00000360668 ZNF316A6NFI3 1004 aaPredicted RBP30.11■■■□□ 2.41
MAP1LC3A-201ENST00000360668 L3MBTL2Q969R5 705 aa30.11■■■□□ 2.41
MAP1LC3A-201ENST00000360668 CCDC144AA2RUR9 1427 aa30.09■■■□□ 2.41
MAP1LC3A-201ENST00000360668 EFCAB6Q5THR3 1501 aa30.07■■■□□ 2.4
MAP1LC3A-201ENST00000360668 ARHGEF40Q8TER5 1519 aa30.07■■■□□ 2.4
MAP1LC3A-201ENST00000360668 CEP152O94986 1710 aa30.06■■■□□ 2.4
MAP1LC3A-201ENST00000360668 PTPRTO14522 1441 aa30.04■■■□□ 2.4
MAP1LC3A-201ENST00000360668 AGLP35573 1532 aa30.04■■■□□ 2.4
MAP1LC3A-201ENST00000360668 GGT6Q6P531 493 aa30.04■■■□□ 2.4
MAP1LC3A-201ENST00000360668 SPHKAPQ2M3C7 1700 aa30.03■■■□□ 2.4
MAP1LC3A-201ENST00000360668 TRPM2O94759 1503 aa30.03■■■□□ 2.4
MAP1LC3A-201ENST00000360668 ABCC3O15438 1527 aa30.02■■■□□ 2.4
MAP1LC3A-201ENST00000360668 ZC3H13Q5T200 1668 aaKnown RBP30■■■□□ 2.39
MAP1LC3A-201ENST00000360668 WASHC2CQ9Y4E1 1318 aa29.97■■■□□ 2.39
MAP1LC3A-201ENST00000360668 ARID4BQ4LE39 1312 aaPredicted RBP29.94■■■□□ 2.38
MAP1LC3A-201ENST00000360668 CAMSAP1Q5T5Y3 1602 aa29.94■■■□□ 2.38
MAP1LC3A-201ENST00000360668 NPATQ14207 1427 aa29.91■■■□□ 2.38
MAP1LC3A-201ENST00000360668 PPP6R1Q9UPN7 881 aa29.9■■■□□ 2.38
MAP1LC3A-201ENST00000360668 SIGLEC1Q9BZZ2 1709 aa29.89■■■□□ 2.38
MAP1LC3A-201ENST00000360668 ARHGAP31Q2M1Z3 1444 aa29.89■■■□□ 2.38
MAP1LC3A-201ENST00000360668 CLTCL1P53675 1640 aa29.89■■■□□ 2.38
MAP1LC3A-201ENST00000360668 UHRF1BP1Q6BDS2 1440 aa29.89■■■□□ 2.37
MAP1LC3A-201ENST00000360668 NBPF8Q3BBV2 869 aa29.86■■■□□ 2.37
MAP1LC3A-201ENST00000360668 SPATA31E1Q6ZUB1 1445 aa29.86■■■□□ 2.37
MAP1LC3A-201ENST00000360668 NEURL4Q96JN8 1562 aa29.85■■■□□ 2.37
MAP1LC3A-201ENST00000360668 CNTLNQ9NXG0 1405 aa29.83■■■□□ 2.37
MAP1LC3A-201ENST00000360668 ADAMTSL3P82987 1691 aa29.81■■■□□ 2.36
MAP1LC3A-201ENST00000360668 DCAF11Q8TEB1 546 aa29.81■■■□□ 2.36
MAP1LC3A-201ENST00000360668 NOS1P29475 1434 aa29.8■■■□□ 2.36
MAP1LC3A-201ENST00000360668 RGL3Q3MIN7 710 aa29.78■■■□□ 2.36
MAP1LC3A-201ENST00000360668 KIF1BO60333 1816 aa29.76■■■□□ 2.35
MAP1LC3A-201ENST00000360668 UGGT1Q9NYU2 1555 aa29.75■■■□□ 2.35
MAP1LC3A-201ENST00000360668 CFAP65Q6ZU64 1925 aaKnown RBP29.75■■■□□ 2.35
MAP1LC3A-201ENST00000360668 KDM2AQ9Y2K7 1162 aa29.74■■■□□ 2.35
MAP1LC3A-201ENST00000360668 MLECQ14165 292 aa29.73■■■□□ 2.35
MAP1LC3A-201ENST00000360668 RALGAPBQ86X10 1494 aa29.73■■■□□ 2.35
MAP1LC3A-201ENST00000360668 PTPRMP28827 1452 aa29.73■■■□□ 2.35
MAP1LC3A-201ENST00000360668 CLTCQ00610 1675 aaKnown RBP29.73■■■□□ 2.35
MAP1LC3A-201ENST00000360668 DIEXFQ68CQ4 756 aaKnown RBP29.73■■■□□ 2.35
MAP1LC3A-201ENST00000360668 PRAG1Q86YV5 1406 aa29.73■■■□□ 2.35
MAP1LC3A-201ENST00000360668 STAC3Q96MF2 364 aa29.72■■■□□ 2.35
MAP1LC3A-201ENST00000360668 ZNF326Q5BKZ1 582 aaKnown RBP29.71■■■□□ 2.35
MAP1LC3A-201ENST00000360668 SYNMO15061 1565 aa29.71■■■□□ 2.35
MAP1LC3A-201ENST00000360668 PREX1Q8TCU6 1659 aa29.7■■■□□ 2.35
MAP1LC3A-201ENST00000360668 PIK3C2BO00750 1634 aa29.7■■■□□ 2.35
MAP1LC3A-201ENST00000360668 MADDQ8WXG6 1647 aa29.7■■■□□ 2.35
MAP1LC3A-201ENST00000360668 ADGRB3O60242 1522 aa29.68■■■□□ 2.34
MAP1LC3A-201ENST00000360668 EIF4G2P78344 907 aaKnown RBP eCLIP29.68■■■□□ 2.34
MAP1LC3A-201ENST00000360668 TRPM1Q7Z4N2 1603 aa29.65■■■□□ 2.34
MAP1LC3A-201ENST00000360668 MROH2AA6NES4 1674 aa29.65■■■□□ 2.34
MAP1LC3A-201ENST00000360668 HSPA5P11021 654 aaKnown RBP29.64■■■□□ 2.33
MAP1LC3A-201ENST00000360668 ERVK-7P63135 1459 aa29.63■■■□□ 2.33
MAP1LC3A-201ENST00000360668 SLC52A1Q9NWF4 448 aa29.62■■■□□ 2.33
MAP1LC3A-201ENST00000360668 ESF1Q9H501 851 aaKnown RBP29.61■■■□□ 2.33
MAP1LC3A-201ENST00000360668 IFT172Q9UG01 1749 aa29.6■■■□□ 2.33
MAP1LC3A-201ENST00000360668 HIRIP3Q9BW71 556 aaPredicted RBP29.6■■■□□ 2.33
MAP1LC3A-201ENST00000360668 SPATA31D1Q6ZQQ2 1576 aa29.59■■■□□ 2.33
MAP1LC3A-201ENST00000360668 MYOM2P54296 1465 aa29.59■■■□□ 2.33
MAP1LC3A-201ENST00000360668 RIMS1Q86UR5 1692 aaKnown RBP29.58■■■□□ 2.33
MAP1LC3A-201ENST00000360668 LAMC1P11047 1609 aa29.55■■■□□ 2.32
MAP1LC3A-201ENST00000360668 ROCK2O75116 1388 aaKnown RBP29.55■■■□□ 2.32
MAP1LC3A-201ENST00000360668 ZMYM3Q14202 1370 aa29.55■■■□□ 2.32
MAP1LC3A-201ENST00000360668 GPRASP1Q5JY77 1395 aa29.55■■■□□ 2.32
MAP1LC3A-201ENST00000360668 CARD11Q9BXL7 1154 aa29.55■■■□□ 2.32
MAP1LC3A-201ENST00000360668 FBXO31Q5XUX0 539 aaPredicted RBP29.54■■■□□ 2.32
MAP1LC3A-201ENST00000360668 RPGRIP1LQ68CZ1 1315 aa29.54■■■□□ 2.32
MAP1LC3A-201ENST00000360668 USP47Q96K76 1375 aa29.54■■■□□ 2.32
MAP1LC3A-201ENST00000360668 CHGAP10645 457 aaKnown RBP29.53■■■□□ 2.32
MAP1LC3A-201ENST00000360668 IDI1Q13907 227 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms