RNA–Protein interactions for RNA: ENST00000360244.8

APH1A-202, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APH1A, Length 2,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-202ENST00000360244 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
APH1A-202ENST00000360244 FRAT1Q92837 279 aaPredicted RBP23.49■■□□□ 1.35
APH1A-202ENST00000360244 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
APH1A-202ENST00000360244 SLC4A3P48751 1232 aa23.47■■□□□ 1.35
APH1A-202ENST00000360244 CFDP1Q9UEE9 299 aaPredicted RBP23.47■■□□□ 1.35
APH1A-202ENST00000360244 BLMP54132 1417 aaPredicted RBP23.46■■□□□ 1.35
APH1A-202ENST00000360244 ITSN2Q9NZM3 1697 aa23.46■■□□□ 1.35
APH1A-202ENST00000360244 INSRP06213 1382 aa23.46■■□□□ 1.35
APH1A-202ENST00000360244 ANKRD30AQ9BXX3 1397 aa23.46■■□□□ 1.35
APH1A-202ENST00000360244 DAXXQ9UER7 740 aaPredicted RBP23.45■■□□□ 1.35
APH1A-202ENST00000360244 ANKRD50Q9ULJ7 1429 aa23.45■■□□□ 1.35
APH1A-202ENST00000360244 KDM2AQ9Y2K7 1162 aa23.45■■□□□ 1.35
APH1A-202ENST00000360244 KDM2BQ8NHM5 1336 aa23.45■■□□□ 1.34
APH1A-202ENST00000360244 ZMYM4Q5VZL5 1548 aa23.45■■□□□ 1.34
APH1A-202ENST00000360244 RAPGEF6Q8TEU7 1601 aa23.44■■□□□ 1.34
APH1A-202ENST00000360244 KIAA0556O60303 1618 aa23.42■■□□□ 1.34
APH1A-202ENST00000360244 PER1O15534 1290 aaPredicted RBP23.42■■□□□ 1.34
APH1A-202ENST00000360244 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
APH1A-202ENST00000360244 TROQ12816 1431 aaPredicted RBP23.41■■□□□ 1.34
APH1A-202ENST00000360244 PLEKHH2Q8IVE3 1493 aa23.41■■□□□ 1.34
APH1A-202ENST00000360244 PRG4Q92954 1404 aaPredicted RBP23.41■■□□□ 1.34
APH1A-202ENST00000360244 NUP155O75694 1391 aa23.41■■□□□ 1.34
APH1A-202ENST00000360244 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
APH1A-202ENST00000360244 C20orf194Q5TEA3 1177 aa23.4■■□□□ 1.34
APH1A-202ENST00000360244 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
APH1A-202ENST00000360244 DISP1Q96F81 1524 aa23.39■■□□□ 1.34
APH1A-202ENST00000360244 CENPQQ7L2Z9 268 aaPredicted RBP23.39■■□□□ 1.33
APH1A-202ENST00000360244 UBE2Q2Q8WVN8 375 aa23.39■■□□□ 1.33
APH1A-202ENST00000360244 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
APH1A-202ENST00000360244 FAM161AQ3B820 660 aa23.38■■□□□ 1.33
APH1A-202ENST00000360244 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
APH1A-202ENST00000360244 C8orf34Q49A92 452 aa23.37■■□□□ 1.33
APH1A-202ENST00000360244 KDM5DQ9BY66 1539 aa23.36■■□□□ 1.33
APH1A-202ENST00000360244 ZNF608Q9ULD9 1512 aaPredicted RBP23.35■■□□□ 1.33
APH1A-202ENST00000360244 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
APH1A-202ENST00000360244 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.32
APH1A-202ENST00000360244 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.32
APH1A-202ENST00000360244 FRAT2O75474 233 aaPredicted RBP23.33■■□□□ 1.32
APH1A-202ENST00000360244 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
APH1A-202ENST00000360244 PRAG1Q86YV5 1406 aa23.29■■□□□ 1.32
APH1A-202ENST00000360244 EIF5BO60841 1220 aaKnown RBP23.29■■□□□ 1.32
APH1A-202ENST00000360244 SHANK2Q9UPX8 1470 aa23.28■■□□□ 1.32
APH1A-202ENST00000360244 PTPRGP23470 1445 aa23.27■■□□□ 1.32
APH1A-202ENST00000360244 C9orf84Q5VXU9 1444 aa23.27■■□□□ 1.32
APH1A-202ENST00000360244 FAM43AQ8N2R8 423 aa23.27■■□□□ 1.32
APH1A-202ENST00000360244 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
APH1A-202ENST00000360244 DISP3Q9P2K9 1392 aa23.24■■□□□ 1.31
APH1A-202ENST00000360244 DUSP27Q5VZP5 1158 aa23.24■■□□□ 1.31
APH1A-202ENST00000360244 PANK3Q9H999 370 aa23.24■■□□□ 1.31
APH1A-202ENST00000360244 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
APH1A-202ENST00000360244 GPRASP1Q5JY77 1395 aa23.23■■□□□ 1.31
APH1A-202ENST00000360244 NBPF1Q3BBV0 1214 aa23.23■■□□□ 1.31
APH1A-202ENST00000360244 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
APH1A-202ENST00000360244 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
APH1A-202ENST00000360244 TESK2Q96S53 571 aa23.21■■□□□ 1.31
APH1A-202ENST00000360244 PLEKHH1Q9ULM0 1364 aa23.21■■□□□ 1.31
APH1A-202ENST00000360244 RGS3P49796 1198 aa23.21■■□□□ 1.31
APH1A-202ENST00000360244 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.2■■□□□ 1.3
APH1A-202ENST00000360244 LAMC1P11047 1609 aa23.2■■□□□ 1.3
APH1A-202ENST00000360244 PRDM15P57071 1507 aaPredicted RBP23.2■■□□□ 1.3
APH1A-202ENST00000360244 PLB1Q6P1J6 1458 aa23.18■■□□□ 1.3
APH1A-202ENST00000360244 ERBINQ96RT1 1412 aa23.18■■□□□ 1.3
APH1A-202ENST00000360244 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
APH1A-202ENST00000360244 CCDC144AA2RUR9 1427 aa23.16■■□□□ 1.3
APH1A-202ENST00000360244 FAM135AQ9P2D6 1515 aa23.16■■□□□ 1.3
APH1A-202ENST00000360244 TSPY4P0CV99 314 aa23.15■■□□□ 1.3
APH1A-202ENST00000360244 TSPY10P0CW01 314 aa23.15■■□□□ 1.3
APH1A-202ENST00000360244 GOLGA2Q08379 1002 aa23.15■■□□□ 1.3
APH1A-202ENST00000360244 VIRMAQ69YN4 1812 aaKnown RBP23.14■■□□□ 1.3
APH1A-202ENST00000360244 TMF1P82094 1093 aa23.13■■□□□ 1.29
APH1A-202ENST00000360244 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
APH1A-202ENST00000360244 A2MP01023 1474 aa23.12■■□□□ 1.29
APH1A-202ENST00000360244 WDR43Q15061 677 aaKnown RBP eCLIP23.12■■□□□ 1.29
APH1A-202ENST00000360244 EIF3AQ14152 1382 aaKnown RBP23.11■■□□□ 1.29
APH1A-202ENST00000360244 USP19O94966 1318 aa23.11■■□□□ 1.29
APH1A-202ENST00000360244 CLASP1Q7Z460 1538 aa23.11■■□□□ 1.29
APH1A-202ENST00000360244 ABCC10Q5T3U5 1492 aa23.11■■□□□ 1.29
APH1A-202ENST00000360244 SLFN5Q08AF3 891 aa23.09■■□□□ 1.29
APH1A-202ENST00000360244 POGKQ9P215 609 aa23.09■■□□□ 1.29
APH1A-202ENST00000360244 PPP2R1AP30153 589 aa23.09■■□□□ 1.29
APH1A-202ENST00000360244 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
APH1A-202ENST00000360244 EIF2AK4Q9P2K8 1649 aaKnown RBP23.07■■□□□ 1.28
APH1A-202ENST00000360244 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
APH1A-202ENST00000360244 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
APH1A-202ENST00000360244 TRMT2AQ8IZ69 625 aaKnown RBP23.06■■□□□ 1.28
APH1A-202ENST00000360244 PLA2R1Q13018 1463 aa23.05■■□□□ 1.28
APH1A-202ENST00000360244 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
APH1A-202ENST00000360244 MYO5CQ9NQX4 1742 aa23.04■■□□□ 1.28
APH1A-202ENST00000360244 HNRNPMP52272 730 aaKnown RBP eCLIP23.04■■□□□ 1.28
APH1A-202ENST00000360244 WDR7Q9Y4E6 1490 aa23.04■■□□□ 1.28
APH1A-202ENST00000360244 PLEKHD1A6NEE1 506 aa23.03■■□□□ 1.28
APH1A-202ENST00000360244 BECN1Q14457 450 aa23.03■■□□□ 1.28
APH1A-202ENST00000360244 NKTRP30414 1462 aaKnown RBP23.03■■□□□ 1.28
APH1A-202ENST00000360244 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
APH1A-202ENST00000360244 IGHDP01880 384 aa23.03■■□□□ 1.28
APH1A-202ENST00000360244 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
APH1A-202ENST00000360244 CCDC141Q6ZP82 1450 aa23.02■■□□□ 1.28
APH1A-202ENST00000360244 NUP160Q12769 1436 aa23.01■■□□□ 1.27
APH1A-202ENST00000360244 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
APH1A-202ENST00000360244 SEC24BO95487 1268 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms