RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
LMBR1-202ENST00000359422 GPATCH3Q96I76 525 aa20.38■□□□□ 0.85
LMBR1-202ENST00000359422 FOXD4L1Q9NU39 408 aa20.38■□□□□ 0.85
LMBR1-202ENST00000359422 EID1Q9Y6B2 187 aa20.38■□□□□ 0.85
LMBR1-202ENST00000359422 PANK3Q9H999 370 aa20.38■□□□□ 0.85
LMBR1-202ENST00000359422 JPH4Q96JJ6 628 aa20.37■□□□□ 0.85
LMBR1-202ENST00000359422 BCL2L13Q9BXK5 485 aa20.36■□□□□ 0.85
LMBR1-202ENST00000359422 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
LMBR1-202ENST00000359422 GOLGA6L3A6NEY3 463 aa20.35■□□□□ 0.85
LMBR1-202ENST00000359422 PHLDB1Q86UU1 1377 aa20.33■□□□□ 0.85
LMBR1-202ENST00000359422 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
LMBR1-202ENST00000359422 HSP90B1P14625 803 aaKnown RBP20.33■□□□□ 0.84
LMBR1-202ENST00000359422 CCDC9Q9Y3X0 531 aaKnown RBP20.33■□□□□ 0.84
LMBR1-202ENST00000359422 PRKRIP1Q9H875 184 aaPredicted RBP20.32■□□□□ 0.84
LMBR1-202ENST00000359422 KIF15Q9NS87 1388 aa20.32■□□□□ 0.84
LMBR1-202ENST00000359422 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
LMBR1-202ENST00000359422 PLIN1O60240 522 aa20.31■□□□□ 0.84
LMBR1-202ENST00000359422 ARID3AQ99856 593 aa20.3■□□□□ 0.84
LMBR1-202ENST00000359422 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
LMBR1-202ENST00000359422 CCDC18Q5T9S5 1454 aa20.3■□□□□ 0.84
LMBR1-202ENST00000359422 ST18O60284 1047 aa20.29■□□□□ 0.84
LMBR1-202ENST00000359422 SMARCA2P51531 1590 aa20.28■□□□□ 0.84
LMBR1-202ENST00000359422 CCDC144AA2RUR9 1427 aa20.28■□□□□ 0.84
LMBR1-202ENST00000359422 TOMM22Q9NS69 142 aa20.27■□□□□ 0.84
LMBR1-202ENST00000359422 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.84
LMBR1-202ENST00000359422 FOXD4L5Q5VV16 416 aaPredicted RBP20.26■□□□□ 0.83
LMBR1-202ENST00000359422 FOXD4L4Q8WXT5 416 aaPredicted RBP20.26■□□□□ 0.83
LMBR1-202ENST00000359422 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
LMBR1-202ENST00000359422 TMX4Q9H1E5 349 aaPredicted RBP20.25■□□□□ 0.83
LMBR1-202ENST00000359422 TPM4P67936 248 aa20.25■□□□□ 0.83
LMBR1-202ENST00000359422 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
LMBR1-202ENST00000359422 ANKRD45Q5TZF3 282 aa20.25■□□□□ 0.83
LMBR1-202ENST00000359422 EXOC6Q8TAG9 804 aa20.25■□□□□ 0.83
LMBR1-202ENST00000359422 CENPQQ7L2Z9 268 aaPredicted RBP20.24■□□□□ 0.83
LMBR1-202ENST00000359422 PDE4AP27815 886 aa20.24■□□□□ 0.83
LMBR1-202ENST00000359422 RASSF8Q8NHQ8 419 aa20.24■□□□□ 0.83
LMBR1-202ENST00000359422 APAF1O14727 1248 aa20.24■□□□□ 0.83
LMBR1-202ENST00000359422 COG6Q9Y2V7 657 aa20.24■□□□□ 0.83
LMBR1-202ENST00000359422 KIF16BQ96L93 1317 aa20.24■□□□□ 0.83
LMBR1-202ENST00000359422 CSPP1Q1MSJ5 1256 aa20.24■□□□□ 0.83
LMBR1-202ENST00000359422 ZKSCAN2Q63HK3 967 aa20.24■□□□□ 0.83
LMBR1-202ENST00000359422 FRAT2O75474 233 aaPredicted RBP20.23■□□□□ 0.83
LMBR1-202ENST00000359422 VGFO15240 615 aaPredicted RBP20.23■□□□□ 0.83
LMBR1-202ENST00000359422 E9PSI1 815 aa20.22■□□□□ 0.83
LMBR1-202ENST00000359422 RILPL2Q969X0 211 aa20.22■□□□□ 0.83
LMBR1-202ENST00000359422 SLC4A3P48751 1232 aa20.22■□□□□ 0.83
LMBR1-202ENST00000359422 AMER1Q5JTC6 1135 aaPredicted RBP20.22■□□□□ 0.83
LMBR1-202ENST00000359422 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
LMBR1-202ENST00000359422 SF3A1Q15459 793 aaKnown RBP20.21■□□□□ 0.83
LMBR1-202ENST00000359422 FAM161AQ3B820 660 aa20.21■□□□□ 0.83
LMBR1-202ENST00000359422 COG3Q96JB2 828 aa20.21■□□□□ 0.83
LMBR1-202ENST00000359422 KIF3AQ9Y496 699 aa20.21■□□□□ 0.83
LMBR1-202ENST00000359422 RRP1P56182 461 aaKnown RBP20.19■□□□□ 0.82
LMBR1-202ENST00000359422 CREBRFQ8IUR6 639 aa20.19■□□□□ 0.82
LMBR1-202ENST00000359422 CRBNQ96SW2 442 aa20.19■□□□□ 0.82
LMBR1-202ENST00000359422 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
LMBR1-202ENST00000359422 MINK1Q8N4C8 1332 aaPredicted RBP20.18■□□□□ 0.82
LMBR1-202ENST00000359422 TEFQ10587 303 aa20.18■□□□□ 0.82
LMBR1-202ENST00000359422 ZBED9Q6R2W3 1325 aa20.18■□□□□ 0.82
LMBR1-202ENST00000359422 USP47Q96K76 1375 aa20.18■□□□□ 0.82
LMBR1-202ENST00000359422 NOC3LQ8WTT2 800 aaKnown RBP20.17■□□□□ 0.82
LMBR1-202ENST00000359422 DDX49Q9Y6V7 483 aaKnown RBP20.16■□□□□ 0.82
LMBR1-202ENST00000359422 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
LMBR1-202ENST00000359422 FOXD4L6Q3SYB3 417 aaPredicted RBP20.15■□□□□ 0.82
LMBR1-202ENST00000359422 FOXD4L3Q6VB84 417 aaPredicted RBP20.15■□□□□ 0.82
LMBR1-202ENST00000359422 G3V3G9 751 aa20.15■□□□□ 0.82
LMBR1-202ENST00000359422 DCAF8Q5TAQ9 597 aa20.15■□□□□ 0.82
LMBR1-202ENST00000359422 PHF14O94880 888 aa20.15■□□□□ 0.82
LMBR1-202ENST00000359422 DDX11L8A8MPP1 907 aa20.13■□□□□ 0.81
LMBR1-202ENST00000359422 USP35Q9P2H5 1018 aa20.13■□□□□ 0.81
LMBR1-202ENST00000359422 C1orf141Q5JVX7 400 aa20.12■□□□□ 0.81
LMBR1-202ENST00000359422 H3BQV1 296 aa20.11■□□□□ 0.81
LMBR1-202ENST00000359422 IFFO2Q5TF58 517 aa20.11■□□□□ 0.81
LMBR1-202ENST00000359422 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
LMBR1-202ENST00000359422 FAM184AQ8NB25 1140 aa20.11■□□□□ 0.81
LMBR1-202ENST00000359422 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
LMBR1-202ENST00000359422 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
LMBR1-202ENST00000359422 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
LMBR1-202ENST00000359422 PTPRGP23470 1445 aa20.09■□□□□ 0.81
LMBR1-202ENST00000359422 MARCH6O60337 910 aa20.09■□□□□ 0.81
LMBR1-202ENST00000359422 ATP6V1DQ9Y5K8 247 aa20.09■□□□□ 0.81
LMBR1-202ENST00000359422 RUSC2Q8N2Y8 1516 aa20.09■□□□□ 0.81
LMBR1-202ENST00000359422 DIAPH3Q9NSV4 1193 aa20.09■□□□□ 0.81
LMBR1-202ENST00000359422 NEXNQ0ZGT2 675 aa20.09■□□□□ 0.81
LMBR1-202ENST00000359422 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
LMBR1-202ENST00000359422 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.81
LMBR1-202ENST00000359422 DDX19BQ9UMR2 479 aa20.08■□□□□ 0.81
LMBR1-202ENST00000359422 PDE4CQ08493 712 aa20.08■□□□□ 0.8
LMBR1-202ENST00000359422 RIPK4P57078 832 aa20.08■□□□□ 0.8
LMBR1-202ENST00000359422 WIZO95785 1651 aa20.07■□□□□ 0.8
LMBR1-202ENST00000359422 DZIP1LQ8IYY4 767 aaKnown RBP20.07■□□□□ 0.8
LMBR1-202ENST00000359422 TPM3P06753 285 aa20.06■□□□□ 0.8
LMBR1-202ENST00000359422 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
LMBR1-202ENST00000359422 REC8O95072 547 aa20.05■□□□□ 0.8
LMBR1-202ENST00000359422 PES1O00541 588 aaKnown RBP20.05■□□□□ 0.8
LMBR1-202ENST00000359422 API5Q9BZZ5 524 aaKnown RBP20.05■□□□□ 0.8
LMBR1-202ENST00000359422 BECN2A8MW95 431 aa20.05■□□□□ 0.8
LMBR1-202ENST00000359422 CYB5RLQ6IPT4 315 aa20.04■□□□□ 0.8
LMBR1-202ENST00000359422 TTC5Q8N0Z6 440 aa20.04■□□□□ 0.8
LMBR1-202ENST00000359422 ZKSCAN1P17029 563 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms