RNA–Protein interactions for RNA: ENST00000357769.4

THSD4-203, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene THSD4, Length 3,403 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-203ENST00000357769 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
THSD4-203ENST00000357769 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
THSD4-203ENST00000357769 KIF15Q9NS87 1388 aa13.03□□□□□ -0.32
THSD4-203ENST00000357769 EXOC6Q8TAG9 804 aa13.03□□□□□ -0.32
THSD4-203ENST00000357769 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
THSD4-203ENST00000357769 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
THSD4-203ENST00000357769 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
THSD4-203ENST00000357769 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
THSD4-203ENST00000357769 ARHGAP5Q13017 1502 aa13□□□□□ -0.33
THSD4-203ENST00000357769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.99□□□□□ -0.33
THSD4-203ENST00000357769 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
THSD4-203ENST00000357769 PREX2Q70Z35 1606 aa12.98□□□□□ -0.33
THSD4-203ENST00000357769 TTC37Q6PGP7 1564 aa12.98□□□□□ -0.33
THSD4-203ENST00000357769 PANK3Q9H999 370 aa12.97□□□□□ -0.33
THSD4-203ENST00000357769 EFCAB2Q5VUJ9 269 aa12.96□□□□□ -0.33
THSD4-203ENST00000357769 CDC42BPBQ9Y5S2 1711 aa12.95□□□□□ -0.34
THSD4-203ENST00000357769 ADGRL2O95490 1459 aa12.95□□□□□ -0.34
THSD4-203ENST00000357769 SHANK2Q9UPX8 1470 aa12.95□□□□□ -0.34
THSD4-203ENST00000357769 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
THSD4-203ENST00000357769 MYO5CQ9NQX4 1742 aa12.95□□□□□ -0.34
THSD4-203ENST00000357769 ADGBQ8N7X0 1667 aa12.95□□□□□ -0.34
THSD4-203ENST00000357769 CCDC141Q6ZP82 1450 aa12.95□□□□□ -0.34
THSD4-203ENST00000357769 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
THSD4-203ENST00000357769 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
THSD4-203ENST00000357769 PLEKHH2Q8IVE3 1493 aa12.94□□□□□ -0.34
THSD4-203ENST00000357769 CROCC2H7BZ55 1655 aa12.94□□□□□ -0.34
THSD4-203ENST00000357769 SAMD9LQ8IVG5 1584 aa12.94□□□□□ -0.34
THSD4-203ENST00000357769 PLCH2O75038 1416 aa12.94□□□□□ -0.34
THSD4-203ENST00000357769 CCDC146Q8IYE0 955 aa12.93□□□□□ -0.34
THSD4-203ENST00000357769 ARHGEF5Q12774 1597 aa12.93□□□□□ -0.34
THSD4-203ENST00000357769 DISP3Q9P2K9 1392 aa12.93□□□□□ -0.34
THSD4-203ENST00000357769 MBD5Q9P267 1494 aa12.93□□□□□ -0.34
THSD4-203ENST00000357769 RCAN3Q9UKA8 241 aa12.93□□□□□ -0.34
THSD4-203ENST00000357769 MYBBP1AQ9BQG0 1328 aaKnown RBP12.92□□□□□ -0.34
THSD4-203ENST00000357769 TNNT2P45379 298 aaPredicted RBP12.92□□□□□ -0.34
THSD4-203ENST00000357769 C20orf194Q5TEA3 1177 aa12.92□□□□□ -0.34
THSD4-203ENST00000357769 NOP58Q9Y2X3 529 aaKnown RBP12.92□□□□□ -0.34
THSD4-203ENST00000357769 CCDC144AA2RUR9 1427 aa12.92□□□□□ -0.34
THSD4-203ENST00000357769 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
THSD4-203ENST00000357769 ASXL2Q76L83 1435 aa12.91□□□□□ -0.34
THSD4-203ENST00000357769 AFAP1Q8N556 730 aa12.91□□□□□ -0.34
THSD4-203ENST00000357769 SMG6Q86US8 1419 aaKnown RBP12.91□□□□□ -0.34
THSD4-203ENST00000357769 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
THSD4-203ENST00000357769 KDM5CP41229 1560 aa12.9□□□□□ -0.34
THSD4-203ENST00000357769 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.35
THSD4-203ENST00000357769 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
THSD4-203ENST00000357769 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
THSD4-203ENST00000357769 KTN1Q86UP2 1357 aaKnown RBP12.88□□□□□ -0.35
THSD4-203ENST00000357769 DEKP35659 375 aaKnown RBP12.88□□□□□ -0.35
THSD4-203ENST00000357769 NUTM2DQ5VT03 806 aaPredicted RBP12.88□□□□□ -0.35
THSD4-203ENST00000357769 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
THSD4-203ENST00000357769 ADAMTS8Q9UP79 889 aa12.87□□□□□ -0.35
THSD4-203ENST00000357769 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
THSD4-203ENST00000357769 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
THSD4-203ENST00000357769 CYB5RLQ6IPT4 315 aa12.86□□□□□ -0.35
THSD4-203ENST00000357769 ARAP3Q8WWN8 1544 aa12.85□□□□□ -0.35
THSD4-203ENST00000357769 RALGAPBQ86X10 1494 aa12.85□□□□□ -0.35
THSD4-203ENST00000357769 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
THSD4-203ENST00000357769 RALBP1Q15311 655 aa12.84□□□□□ -0.35
THSD4-203ENST00000357769 TESK2Q96S53 571 aa12.84□□□□□ -0.35
THSD4-203ENST00000357769 FANCAO15360 1455 aa12.84□□□□□ -0.35
THSD4-203ENST00000357769 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
THSD4-203ENST00000357769 ABCA9Q8IUA7 1624 aa12.83□□□□□ -0.35
THSD4-203ENST00000357769 ABCC1P33527 1531 aa12.83□□□□□ -0.36
THSD4-203ENST00000357769 FAM135AQ9P2D6 1515 aa12.83□□□□□ -0.36
THSD4-203ENST00000357769 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
THSD4-203ENST00000357769 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.36
THSD4-203ENST00000357769 RGS3P49796 1198 aa12.82□□□□□ -0.36
THSD4-203ENST00000357769 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
THSD4-203ENST00000357769 MAST1Q9Y2H9 1570 aa12.82□□□□□ -0.36
THSD4-203ENST00000357769 TMF1P82094 1093 aa12.81□□□□□ -0.36
THSD4-203ENST00000357769 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
THSD4-203ENST00000357769 KNSTRNQ9Y448 316 aa12.81□□□□□ -0.36
THSD4-203ENST00000357769 PLA2R1Q13018 1463 aa12.81□□□□□ -0.36
THSD4-203ENST00000357769 TRAPPC8Q9Y2L5 1435 aa12.81□□□□□ -0.36
THSD4-203ENST00000357769 PRAG1Q86YV5 1406 aa12.81□□□□□ -0.36
THSD4-203ENST00000357769 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
THSD4-203ENST00000357769 A2MP01023 1474 aa12.8□□□□□ -0.36
THSD4-203ENST00000357769 BRD4O60885 1362 aaPredicted RBP12.8□□□□□ -0.36
THSD4-203ENST00000357769 PRKCSHP14314 528 aaPredicted RBP12.8□□□□□ -0.36
THSD4-203ENST00000357769 SAFB2Q14151 953 aaKnown RBP eCLIP12.8□□□□□ -0.36
THSD4-203ENST00000357769 PDE4AP27815 886 aa12.79□□□□□ -0.36
THSD4-203ENST00000357769 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
THSD4-203ENST00000357769 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
THSD4-203ENST00000357769 ADGRL1O94910 1474 aa12.79□□□□□ -0.36
THSD4-203ENST00000357769 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
THSD4-203ENST00000357769 KIF3BO15066 747 aa12.79□□□□□ -0.36
THSD4-203ENST00000357769 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
THSD4-203ENST00000357769 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
THSD4-203ENST00000357769 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
THSD4-203ENST00000357769 DUOX2Q9NRD8 1548 aa12.78□□□□□ -0.36
THSD4-203ENST00000357769 SPINK5Q9NQ38 1064 aaPredicted RBP12.78□□□□□ -0.36
THSD4-203ENST00000357769 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
THSD4-203ENST00000357769 UHRF1BP1Q6BDS2 1440 aa12.77□□□□□ -0.36
THSD4-203ENST00000357769 RTL5Q5HYW3 569 aaPredicted RBP12.77□□□□□ -0.37
THSD4-203ENST00000357769 RIMBP3CA6NJZ7 1639 aa12.77□□□□□ -0.37
THSD4-203ENST00000357769 RIMBP3BA6NNM3 1639 aa12.77□□□□□ -0.37
THSD4-203ENST00000357769 RIMBP3Q9UFD9 1639 aa12.77□□□□□ -0.37
THSD4-203ENST00000357769 ERBINQ96RT1 1412 aa12.77□□□□□ -0.37
THSD4-203ENST00000357769 RNF123Q5XPI4 1314 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms