RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.131e-6■□□□□ 9.6
SPTBN1-202ENST00000356805 SETD5Q9C0A6 1442 aa14.23□□□□□ -0.13
SPTBN1-202ENST00000356805 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
SPTBN1-202ENST00000356805 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
SPTBN1-202ENST00000356805 GTF2E1P29083 439 aaPredicted RBP14.22□□□□□ -0.13
SPTBN1-202ENST00000356805 KIF16BQ96L93 1317 aa14.22□□□□□ -0.13
SPTBN1-202ENST00000356805 H3BQV1 296 aa14.21□□□□□ -0.13
SPTBN1-202ENST00000356805 IFFO2Q5TF58 517 aa14.21□□□□□ -0.13
SPTBN1-202ENST00000356805 CALRP27797 417 aaKnown RBP14.21□□□□□ -0.13
SPTBN1-202ENST00000356805 TEX35Q5T0J7 233 aa14.2□□□□□ -0.14
SPTBN1-202ENST00000356805 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
SPTBN1-202ENST00000356805 TPM2P07951 284 aa14.19□□□□□ -0.14
SPTBN1-202ENST00000356805 KIF27Q86VH2 1401 aa14.19□□□□□ -0.14
SPTBN1-202ENST00000356805 FOXD4L6Q3SYB3 417 aaPredicted RBP14.19□□□□□ -0.14
SPTBN1-202ENST00000356805 FOXD4L3Q6VB84 417 aaPredicted RBP14.19□□□□□ -0.14
SPTBN1-202ENST00000356805 SMC4Q9NTJ3 1288 aa14.19□□□□□ -0.14
SPTBN1-202ENST00000356805 CENPQQ7L2Z9 268 aaPredicted RBP14.18□□□□□ -0.14
SPTBN1-202ENST00000356805 ATP6V1DQ9Y5K8 247 aa14.18□□□□□ -0.14
SPTBN1-202ENST00000356805 FAM161AQ3B820 660 aa14.18□□□□□ -0.14
SPTBN1-202ENST00000356805 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
SPTBN1-202ENST00000356805 ST18O60284 1047 aa14.17□□□□□ -0.14
SPTBN1-202ENST00000356805 NOM1Q5C9Z4 860 aaKnown RBP14.17□□□□□ -0.14
SPTBN1-202ENST00000356805 CCDC70Q6NSX1 233 aa14.17□□□□□ -0.14
SPTBN1-202ENST00000356805 PCMTD1Q96MG8 357 aaPredicted RBP14.17□□□□□ -0.14
SPTBN1-202ENST00000356805 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 GGT6Q6P531 493 aa14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 TRIM34Q9BYJ4 488 aa14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 PKNOX2Q96KN3 472 aa14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 ZNF771Q7L3S4 317 aaPredicted RBP14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 RB1CC1Q8TDY2 1594 aa14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 GOLGA6L19H0YKK7 550 aa14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 AKAP17AQ02040 695 aaKnown RBP14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 CHMP4CQ96CF2 233 aa14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 CTDP1Q9Y5B0 961 aaPredicted RBP14.16□□□□□ -0.14
SPTBN1-202ENST00000356805 HMMRO75330 724 aa14.15□□□□□ -0.14
SPTBN1-202ENST00000356805 KIF3AQ9Y496 699 aa14.15□□□□□ -0.14
SPTBN1-202ENST00000356805 LTV1Q96GA3 475 aaPredicted RBP14.15□□□□□ -0.14
SPTBN1-202ENST00000356805 MSH5O43196 834 aa14.14□□□□□ -0.15
SPTBN1-202ENST00000356805 TPM1P09493 284 aa14.14□□□□□ -0.15
SPTBN1-202ENST00000356805 FAM184AQ8NB25 1140 aa14.14□□□□□ -0.15
SPTBN1-202ENST00000356805 ZNF592Q92610 1267 aa14.14□□□□□ -0.15
SPTBN1-202ENST00000356805 ZBED9Q6R2W3 1325 aa14.14□□□□□ -0.15
SPTBN1-202ENST00000356805 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
SPTBN1-202ENST00000356805 CCDC66A2RUB6 948 aa14.13□□□□□ -0.15
SPTBN1-202ENST00000356805 PDE4AP27815 886 aa14.13□□□□□ -0.15
SPTBN1-202ENST00000356805 RILPL2Q969X0 211 aa14.13□□□□□ -0.15
SPTBN1-202ENST00000356805 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
SPTBN1-202ENST00000356805 HDAC5Q9UQL6 1122 aa14.13□□□□□ -0.15
SPTBN1-202ENST00000356805 CCDC146Q8IYE0 955 aa14.12□□□□□ -0.15
SPTBN1-202ENST00000356805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.12□□□□□ -0.15
SPTBN1-202ENST00000356805 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.153e-6■■■■■ 279.5
SPTBN1-202ENST00000356805 CLUAP1Q96AJ1 413 aa14.11□□□□□ -0.15
SPTBN1-202ENST00000356805 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
SPTBN1-202ENST00000356805 NLRP13Q86W25 1043 aa14.1□□□□□ -0.15
SPTBN1-202ENST00000356805 FOXD1Q16676 465 aa14.1□□□□□ -0.15
SPTBN1-202ENST00000356805 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
SPTBN1-202ENST00000356805 DDX49Q9Y6V7 483 aaKnown RBP14.09□□□□□ -0.15
SPTBN1-202ENST00000356805 CWC22Q9HCG8 908 aaKnown RBP14.09□□□□□ -0.15
SPTBN1-202ENST00000356805 BECN2A8MW95 431 aa14.09□□□□□ -0.15
SPTBN1-202ENST00000356805 AMPHP49418 695 aa14.09□□□□□ -0.15
SPTBN1-202ENST00000356805 NGEFQ8N5V2 710 aa14.09□□□□□ -0.15
SPTBN1-202ENST00000356805 AAMPQ13685 434 aa14.08□□□□□ -0.16
SPTBN1-202ENST00000356805 DIAPH3Q9NSV4 1193 aa14.08□□□□□ -0.16
SPTBN1-202ENST00000356805 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■□□ 15.4
SPTBN1-202ENST00000356805 CWC15Q9P013 229 aaKnown RBP14.08□□□□□ -0.16
SPTBN1-202ENST00000356805 NOL10Q9BSC4 688 aaKnown RBP14.08□□□□□ -0.16
SPTBN1-202ENST00000356805 MRE11P49959 708 aa14.08□□□□□ -0.16
SPTBN1-202ENST00000356805 AMOTL1Q8IY63 956 aa14.08□□□□□ -0.16
SPTBN1-202ENST00000356805 ARHGAP35Q9NRY4 1499 aa14.07□□□□□ -0.16
SPTBN1-202ENST00000356805 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
SPTBN1-202ENST00000356805 HMGN5P82970 282 aaKnown RBP14.07□□□□□ -0.16
SPTBN1-202ENST00000356805 SYNE3Q6ZMZ3 975 aa14.07□□□□□ -0.16
SPTBN1-202ENST00000356805 NGDNQ8NEJ9 315 aaKnown RBP14.07□□□□□ -0.16
SPTBN1-202ENST00000356805 ARGLU1Q9NWB6 273 aaPredicted RBP14.07□□□□□ -0.16
SPTBN1-202ENST00000356805 NUTM2DQ5VT03 806 aaPredicted RBP14.06□□□□□ -0.16
SPTBN1-202ENST00000356805 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
SPTBN1-202ENST00000356805 CGNL1Q0VF96 1302 aa14.06□□□□□ -0.16
SPTBN1-202ENST00000356805 RRP9O43818 475 aaKnown RBP14.06□□□□□ -0.16
SPTBN1-202ENST00000356805 FAM13BQ9NYF5 915 aa14.06□□□□□ -0.16
SPTBN1-202ENST00000356805 TAF3Q5VWG9 929 aa14.06□□□□□ -0.16
SPTBN1-202ENST00000356805 CHMP5Q9NZZ3 219 aa14.06□□□□□ -0.16
SPTBN1-202ENST00000356805 DHX16O60231 1041 aaKnown RBP14.05□□□□□ -0.16
SPTBN1-202ENST00000356805 EVA1CP58658 441 aa14.05□□□□□ -0.16
SPTBN1-202ENST00000356805 NAP1L1P55209 391 aaKnown RBP14.05□□□□□ -0.16
SPTBN1-202ENST00000356805 ACBD3Q9H3P7 528 aa14.05□□□□□ -0.16
SPTBN1-202ENST00000356805 CCDC43Q96MW1 224 aaKnown RBP14.04□□□□□ -0.16
SPTBN1-202ENST00000356805 TRIM29Q14134 588 aa14.04□□□□□ -0.16
SPTBN1-202ENST00000356805 APPP05067 770 aa14.04□□□□□ -0.16
SPTBN1-202ENST00000356805 IPO7O95373 1038 aaKnown RBP14.04□□□□□ -0.16
SPTBN1-202ENST00000356805 ODF2Q5BJF6 829 aa14.04□□□□□ -0.16
SPTBN1-202ENST00000356805 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
SPTBN1-202ENST00000356805 VPS37DQ86XT2 251 aa14.03□□□□□ -0.16
SPTBN1-202ENST00000356805 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
SPTBN1-202ENST00000356805 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.16
SPTBN1-202ENST00000356805 CT47A1Q5JQC4 288 aaPredicted RBP14.02□□□□□ -0.16
SPTBN1-202ENST00000356805 KIF15Q9NS87 1388 aa14.02□□□□□ -0.17
SPTBN1-202ENST00000356805 HOMER1Q86YM7 354 aa14.02□□□□□ -0.17
SPTBN1-202ENST00000356805 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
SPTBN1-202ENST00000356805 RUFY1Q96T51 708 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms