RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 MSNP26038 577 aaKnown RBP20.52■□□□□ 0.88
SHTN1-202ENST00000355371 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.87
SHTN1-202ENST00000355371 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
SHTN1-202ENST00000355371 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
SHTN1-202ENST00000355371 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
SHTN1-202ENST00000355371 AMPHP49418 695 aa20.51■□□□□ 0.87
SHTN1-202ENST00000355371 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
SHTN1-202ENST00000355371 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
SHTN1-202ENST00000355371 TSHZ2Q9NRE2 1034 aa20.5■□□□□ 0.87
SHTN1-202ENST00000355371 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
SHTN1-202ENST00000355371 HTATSF1O43719 755 aaKnown RBP20.49■□□□□ 0.87
SHTN1-202ENST00000355371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
SHTN1-202ENST00000355371 CLUAP1Q96AJ1 413 aa20.49■□□□□ 0.87
SHTN1-202ENST00000355371 MFAP1P55081 439 aaKnown RBP20.48■□□□□ 0.87
SHTN1-202ENST00000355371 E9PSI1 815 aa20.48■□□□□ 0.87
SHTN1-202ENST00000355371 RTN4Q9NQC3 1192 aaKnown RBP20.48■□□□□ 0.87
SHTN1-202ENST00000355371 GNL2Q13823 731 aaKnown RBP20.47■□□□□ 0.87
SHTN1-202ENST00000355371 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
SHTN1-202ENST00000355371 KIF21BO75037 1637 aa20.47■□□□□ 0.87
SHTN1-202ENST00000355371 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
SHTN1-202ENST00000355371 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
SHTN1-202ENST00000355371 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
SHTN1-202ENST00000355371 SYAP1Q96A49 352 aaPredicted RBP20.45■□□□□ 0.86
SHTN1-202ENST00000355371 CENPQQ7L2Z9 268 aaPredicted RBP20.45■□□□□ 0.86
SHTN1-202ENST00000355371 TULP1O00294 542 aaPredicted RBP20.44■□□□□ 0.86
SHTN1-202ENST00000355371 DRC7Q8IY82 874 aa20.44■□□□□ 0.86
SHTN1-202ENST00000355371 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
SHTN1-202ENST00000355371 LRRC9Q6ZRR7 1453 aa20.43■□□□□ 0.86
SHTN1-202ENST00000355371 COG3Q96JB2 828 aa20.43■□□□□ 0.86
SHTN1-202ENST00000355371 TRIM6-TRIM34B2RNG4 842 aa20.42■□□□□ 0.86
SHTN1-202ENST00000355371 ZNF330Q9Y3S2 320 aaPredicted RBP20.42■□□□□ 0.86
SHTN1-202ENST00000355371 CASKIN1Q8WXD9 1431 aa20.42■□□□□ 0.86
SHTN1-202ENST00000355371 GORABQ5T7V8 394 aa20.41■□□□□ 0.86
SHTN1-202ENST00000355371 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
SHTN1-202ENST00000355371 FYCO1Q9BQS8 1478 aa20.4■□□□□ 0.86
SHTN1-202ENST00000355371 RRP7AQ9Y3A4 280 aaKnown RBP20.4■□□□□ 0.86
SHTN1-202ENST00000355371 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
SHTN1-202ENST00000355371 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
SHTN1-202ENST00000355371 TAF7LQ5H9L4 462 aa20.37■□□□□ 0.85
SHTN1-202ENST00000355371 CSPP1Q1MSJ5 1256 aa20.37■□□□□ 0.85
SHTN1-202ENST00000355371 CHMP3Q9Y3E7 222 aa20.37■□□□□ 0.85
SHTN1-202ENST00000355371 MIA2Q96PC5 1412 aa20.35■□□□□ 0.85
SHTN1-202ENST00000355371 ST18O60284 1047 aa20.35■□□□□ 0.85
SHTN1-202ENST00000355371 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
SHTN1-202ENST00000355371 LTV1Q96GA3 475 aaPredicted RBP20.35■□□□□ 0.85
SHTN1-202ENST00000355371 FAM161AQ3B820 660 aa20.34■□□□□ 0.85
SHTN1-202ENST00000355371 KIAA2012Q0VF49 1180 aa20.34■□□□□ 0.85
SHTN1-202ENST00000355371 NCOA2Q15596 1464 aa20.34■□□□□ 0.85
SHTN1-202ENST00000355371 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
SHTN1-202ENST00000355371 NUTM2FA1L443 756 aa20.33■□□□□ 0.85
SHTN1-202ENST00000355371 GZF1Q9H116 711 aaPredicted RBP20.33■□□□□ 0.85
SHTN1-202ENST00000355371 ANKRD50Q9ULJ7 1429 aa20.33■□□□□ 0.84
SHTN1-202ENST00000355371 GOLGA6L3A6NEY3 463 aa20.32■□□□□ 0.84
SHTN1-202ENST00000355371 ISY1Q9ULR0 285 aaKnown RBP20.32■□□□□ 0.84
SHTN1-202ENST00000355371 MINK1Q8N4C8 1332 aaPredicted RBP20.32■□□□□ 0.84
SHTN1-202ENST00000355371 APAF1O14727 1248 aa20.31■□□□□ 0.84
SHTN1-202ENST00000355371 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
SHTN1-202ENST00000355371 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
SHTN1-202ENST00000355371 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
SHTN1-202ENST00000355371 DIAPH1O60610 1272 aaKnown RBP20.3■□□□□ 0.84
SHTN1-202ENST00000355371 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
SHTN1-202ENST00000355371 PDE4AP27815 886 aa20.3■□□□□ 0.84
SHTN1-202ENST00000355371 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.3■□□□□ 0.84
SHTN1-202ENST00000355371 CRBNQ96SW2 442 aa20.3■□□□□ 0.84
SHTN1-202ENST00000355371 GRIN2BQ13224 1484 aa20.29■□□□□ 0.84
SHTN1-202ENST00000355371 KIF7Q2M1P5 1343 aa20.29■□□□□ 0.84
SHTN1-202ENST00000355371 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.844e-9■□□□□ 8.9
SHTN1-202ENST00000355371 TPM4P67936 248 aa20.29■□□□□ 0.84
SHTN1-202ENST00000355371 TMX4Q9H1E5 349 aaPredicted RBP20.29■□□□□ 0.84
SHTN1-202ENST00000355371 CNTLNQ9NXG0 1405 aa20.29■□□□□ 0.84
SHTN1-202ENST00000355371 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
SHTN1-202ENST00000355371 PLIN1O60240 522 aa20.28■□□□□ 0.84
SHTN1-202ENST00000355371 DDX19BQ9UMR2 479 aa20.27■□□□□ 0.84
SHTN1-202ENST00000355371 KIF3AQ9Y496 699 aa20.27■□□□□ 0.84
SHTN1-202ENST00000355371 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.84
SHTN1-202ENST00000355371 USP35Q9P2H5 1018 aa20.27■□□□□ 0.84
SHTN1-202ENST00000355371 PRDM2Q13029 1718 aa20.26■□□□□ 0.83
SHTN1-202ENST00000355371 ANKRD45Q5TZF3 282 aa20.26■□□□□ 0.83
SHTN1-202ENST00000355371 CFTRP13569 1480 aa20.26■□□□□ 0.83
SHTN1-202ENST00000355371 KIF16BQ96L93 1317 aa20.26■□□□□ 0.83
SHTN1-202ENST00000355371 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
SHTN1-202ENST00000355371 DDX11L8A8MPP1 907 aa20.25■□□□□ 0.83
SHTN1-202ENST00000355371 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
SHTN1-202ENST00000355371 RUNDC1Q96C34 613 aa20.25■□□□□ 0.83
SHTN1-202ENST00000355371 RRBP1Q9P2E9 1410 aaKnown RBP20.25■□□□□ 0.83
SHTN1-202ENST00000355371 COG6Q9Y2V7 657 aa20.25■□□□□ 0.83
SHTN1-202ENST00000355371 PHF14O94880 888 aa20.24■□□□□ 0.83
SHTN1-202ENST00000355371 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
SHTN1-202ENST00000355371 API5Q9BZZ5 524 aaKnown RBP20.24■□□□□ 0.83
SHTN1-202ENST00000355371 TEFQ10587 303 aa20.23■□□□□ 0.83
SHTN1-202ENST00000355371 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
SHTN1-202ENST00000355371 CHMP4CQ96CF2 233 aa20.23■□□□□ 0.83
SHTN1-202ENST00000355371 RIPK4P57078 832 aa20.21■□□□□ 0.83
SHTN1-202ENST00000355371 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
SHTN1-202ENST00000355371 ARAP1Q96P48 1450 aa20.21■□□□□ 0.83
SHTN1-202ENST00000355371 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
SHTN1-202ENST00000355371 AAMPQ13685 434 aa20.2■□□□□ 0.82
SHTN1-202ENST00000355371 FOXD4L1Q9NU39 408 aa20.2■□□□□ 0.82
SHTN1-202ENST00000355371 NOL8Q76FK4 1167 aaKnown RBP20.19■□□□□ 0.82
SHTN1-202ENST00000355371 BRD4O60885 1362 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms