RNA–Protein interactions for RNA: ENST00000355007.7

PTPA-204, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5 BASIC

Gene PTPA, Length 2,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-204ENST00000355007 BLMP54132 1417 aaPredicted RBP25.5■■□□□ 1.67
PTPA-204ENST00000355007 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
PTPA-204ENST00000355007 PBRM1Q86U86 1689 aa25.5■■□□□ 1.67
PTPA-204ENST00000355007 ITSN2Q9NZM3 1697 aa25.49■■□□□ 1.67
PTPA-204ENST00000355007 SKAP1Q86WV1 359 aa25.48■■□□□ 1.67
PTPA-204ENST00000355007 DAXXQ9UER7 740 aaPredicted RBP25.48■■□□□ 1.67
PTPA-204ENST00000355007 KIAA0586Q9BVV6 1533 aa25.48■■□□□ 1.67
PTPA-204ENST00000355007 NUP153P49790 1475 aaKnown RBP25.48■■□□□ 1.67
PTPA-204ENST00000355007 PLEKHH2Q8IVE3 1493 aa25.48■■□□□ 1.67
PTPA-204ENST00000355007 KDM2BQ8NHM5 1336 aa25.48■■□□□ 1.67
PTPA-204ENST00000355007 ADAMTS12P58397 1594 aa25.45■■□□□ 1.67
PTPA-204ENST00000355007 ANKRD30AQ9BXX3 1397 aa25.44■■□□□ 1.66
PTPA-204ENST00000355007 SLC4A3P48751 1232 aa25.43■■□□□ 1.66
PTPA-204ENST00000355007 ANKRD50Q9ULJ7 1429 aa25.43■■□□□ 1.66
PTPA-204ENST00000355007 RAPGEF6Q8TEU7 1601 aa25.42■■□□□ 1.66
PTPA-204ENST00000355007 CENPQQ7L2Z9 268 aaPredicted RBP25.42■■□□□ 1.66
PTPA-204ENST00000355007 CEP170Q5SW79 1584 aa25.41■■□□□ 1.66
PTPA-204ENST00000355007 FAM161AQ3B820 660 aa25.41■■□□□ 1.66
PTPA-204ENST00000355007 CFDP1Q9UEE9 299 aaPredicted RBP25.4■■□□□ 1.66
PTPA-204ENST00000355007 KIAA0556O60303 1618 aa25.4■■□□□ 1.66
PTPA-204ENST00000355007 PER1O15534 1290 aaPredicted RBP25.39■■□□□ 1.66
PTPA-204ENST00000355007 KDM5DQ9BY66 1539 aa25.39■■□□□ 1.65
PTPA-204ENST00000355007 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.65
PTPA-204ENST00000355007 GPATCH8Q9UKJ3 1502 aaKnown RBP25.38■■□□□ 1.65
PTPA-204ENST00000355007 C8orf34Q49A92 452 aa25.37■■□□□ 1.65
PTPA-204ENST00000355007 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
PTPA-204ENST00000355007 KDM2AQ9Y2K7 1162 aa25.36■■□□□ 1.65
PTPA-204ENST00000355007 NUP155O75694 1391 aa25.35■■□□□ 1.65
PTPA-204ENST00000355007 C20orf194Q5TEA3 1177 aa25.35■■□□□ 1.65
PTPA-204ENST00000355007 FAM43AQ8N2R8 423 aa25.35■■□□□ 1.65
PTPA-204ENST00000355007 DISP1Q96F81 1524 aa25.35■■□□□ 1.65
PTPA-204ENST00000355007 DCAF11Q8TEB1 546 aa25.34■■□□□ 1.65
PTPA-204ENST00000355007 TRPM1Q7Z4N2 1603 aa25.34■■□□□ 1.65
PTPA-204ENST00000355007 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
PTPA-204ENST00000355007 PRG4Q92954 1404 aaPredicted RBP25.33■■□□□ 1.65
PTPA-204ENST00000355007 FRAT2O75474 233 aaPredicted RBP25.33■■□□□ 1.65
PTPA-204ENST00000355007 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
PTPA-204ENST00000355007 RSPH6AQ9H0K4 717 aa25.32■■□□□ 1.64
PTPA-204ENST00000355007 EIF5BO60841 1220 aaKnown RBP25.31■■□□□ 1.64
PTPA-204ENST00000355007 COL17A1Q9UMD9 1497 aaPredicted RBP25.3■■□□□ 1.64
PTPA-204ENST00000355007 SHANK2Q9UPX8 1470 aa25.29■■□□□ 1.64
PTPA-204ENST00000355007 PTPRGP23470 1445 aa25.27■■□□□ 1.64
PTPA-204ENST00000355007 PRAG1Q86YV5 1406 aa25.27■■□□□ 1.64
PTPA-204ENST00000355007 ZNF777Q9ULD5 760 aaPredicted RBP25.26■■□□□ 1.63
PTPA-204ENST00000355007 CC2D1BQ5T0F9 858 aaKnown RBP25.25■■□□□ 1.63
PTPA-204ENST00000355007 LAMC1P11047 1609 aa25.25■■□□□ 1.63
PTPA-204ENST00000355007 GPRASP1Q5JY77 1395 aa25.24■■□□□ 1.63
PTPA-204ENST00000355007 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
PTPA-204ENST00000355007 EIF4G3O43432 1585 aaKnown RBP25.23■■□□□ 1.63
PTPA-204ENST00000355007 C9orf84Q5VXU9 1444 aa25.23■■□□□ 1.63
PTPA-204ENST00000355007 VIRMAQ69YN4 1812 aaKnown RBP25.22■■□□□ 1.63
PTPA-204ENST00000355007 DUSP27Q5VZP5 1158 aa25.22■■□□□ 1.63
PTPA-204ENST00000355007 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.22■■□□□ 1.63
PTPA-204ENST00000355007 PRDM15P57071 1507 aaPredicted RBP25.2■■□□□ 1.62
PTPA-204ENST00000355007 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
PTPA-204ENST00000355007 PLEKHH1Q9ULM0 1364 aa25.18■■□□□ 1.62
PTPA-204ENST00000355007 PANK3Q9H999 370 aa25.17■■□□□ 1.62
PTPA-204ENST00000355007 ADAMTS8Q9UP79 889 aa25.17■■□□□ 1.62
PTPA-204ENST00000355007 ZNF521Q96K83 1311 aa25.16■■□□□ 1.62
PTPA-204ENST00000355007 RGS3P49796 1198 aa25.16■■□□□ 1.62
PTPA-204ENST00000355007 TESK2Q96S53 571 aa25.16■■□□□ 1.62
PTPA-204ENST00000355007 CLASP1Q7Z460 1538 aa25.15■■□□□ 1.62
PTPA-204ENST00000355007 ERBINQ96RT1 1412 aa25.14■■□□□ 1.62
PTPA-204ENST00000355007 NBPF1Q3BBV0 1214 aa25.14■■□□□ 1.61
PTPA-204ENST00000355007 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
PTPA-204ENST00000355007 GOLGA2Q08379 1002 aa25.12■■□□□ 1.61
PTPA-204ENST00000355007 CCDC144AA2RUR9 1427 aa25.11■■□□□ 1.61
PTPA-204ENST00000355007 FAM135AQ9P2D6 1515 aa25.11■■□□□ 1.61
PTPA-204ENST00000355007 USP19O94966 1318 aa25.1■■□□□ 1.61
PTPA-204ENST00000355007 PLB1Q6P1J6 1458 aa25.09■■□□□ 1.61
PTPA-204ENST00000355007 EIF2AK4Q9P2K8 1649 aaKnown RBP25.09■■□□□ 1.61
PTPA-204ENST00000355007 POGKQ9P215 609 aa25.08■■□□□ 1.61
PTPA-204ENST00000355007 A2MP01023 1474 aa25.08■■□□□ 1.6
PTPA-204ENST00000355007 ABCC10Q5T3U5 1492 aa25.08■■□□□ 1.6
PTPA-204ENST00000355007 TMF1P82094 1093 aa25.08■■□□□ 1.6
PTPA-204ENST00000355007 WDR43Q15061 677 aaKnown RBP eCLIP25.08■■□□□ 1.6
PTPA-204ENST00000355007 TSPY4P0CV99 314 aa25.07■■□□□ 1.6
PTPA-204ENST00000355007 TSPY10P0CW01 314 aa25.07■■□□□ 1.6
PTPA-204ENST00000355007 SLFN5Q08AF3 891 aa25.06■■□□□ 1.6
PTPA-204ENST00000355007 L1TD1Q5T7N2 865 aaKnown RBP25.06■■□□□ 1.6
PTPA-204ENST00000355007 BECN1Q14457 450 aa25.05■■□□□ 1.6
PTPA-204ENST00000355007 ARHGEF5Q12774 1597 aa25.05■■□□□ 1.6
PTPA-204ENST00000355007 PPP2R1AP30153 589 aa25.04■■□□□ 1.6
PTPA-204ENST00000355007 TRMT2AQ8IZ69 625 aaKnown RBP25.04■■□□□ 1.6
PTPA-204ENST00000355007 MYO5CQ9NQX4 1742 aa25.02■■□□□ 1.6
PTPA-204ENST00000355007 NUP160Q12769 1436 aa25.01■■□□□ 1.59
PTPA-204ENST00000355007 NKTRP30414 1462 aaKnown RBP25.01■■□□□ 1.59
PTPA-204ENST00000355007 RRAGDQ9NQL2 400 aaPredicted RBP25.01■■□□□ 1.59
PTPA-204ENST00000355007 GRIN2AQ12879 1464 aa25.01■■□□□ 1.59
PTPA-204ENST00000355007 RGL3Q3MIN7 710 aa25■■□□□ 1.59
PTPA-204ENST00000355007 MAGI2Q86UL8 1455 aa25■■□□□ 1.59
PTPA-204ENST00000355007 MAPK8IP3Q9UPT6 1336 aa24.99■■□□□ 1.59
PTPA-204ENST00000355007 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
PTPA-204ENST00000355007 CCDC141Q6ZP82 1450 aa24.99■■□□□ 1.59
PTPA-204ENST00000355007 NLRP1Q9C000 1473 aa24.99■■□□□ 1.59
PTPA-204ENST00000355007 WDR7Q9Y4E6 1490 aa24.99■■□□□ 1.59
PTPA-204ENST00000355007 PLA2R1Q13018 1463 aa24.98■■□□□ 1.59
PTPA-204ENST00000355007 RNF17Q9BXT8 1623 aaKnown RBP24.98■■□□□ 1.59
PTPA-204ENST00000355007 PIK3C2GO75747 1445 aa24.97■■□□□ 1.59
PTPA-204ENST00000355007 IGHDP01880 384 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms