RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SCAPERQ9BY12 1400 aa12.52□□□□□ -0.41
GABPA-201ENST00000354828 CUL7Q14999 1698 aa12.52□□□□□ -0.41
GABPA-201ENST00000354828 GTF2E1P29083 439 aaPredicted RBP12.51□□□□□ -0.41
GABPA-201ENST00000354828 NCOA2Q15596 1464 aa12.51□□□□□ -0.41
GABPA-201ENST00000354828 PHLDB1Q86UU1 1377 aa12.51□□□□□ -0.41
GABPA-201ENST00000354828 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
GABPA-201ENST00000354828 TROQ12816 1431 aaPredicted RBP12.5□□□□□ -0.41
GABPA-201ENST00000354828 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
GABPA-201ENST00000354828 ST20-MTHFSA0A0A6YYL1 179 aa12.49□□□□□ -0.41
GABPA-201ENST00000354828 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
GABPA-201ENST00000354828 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
GABPA-201ENST00000354828 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
GABPA-201ENST00000354828 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
GABPA-201ENST00000354828 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
GABPA-201ENST00000354828 C1orf141Q5JVX7 400 aa12.47□□□□□ -0.41
GABPA-201ENST00000354828 G3V3G9 751 aa12.47□□□□□ -0.41
GABPA-201ENST00000354828 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
GABPA-201ENST00000354828 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
GABPA-201ENST00000354828 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
GABPA-201ENST00000354828 ANKRD50Q9ULJ7 1429 aa12.47□□□□□ -0.41
GABPA-201ENST00000354828 RALBP1Q15311 655 aa12.46□□□□□ -0.41
GABPA-201ENST00000354828 CHMP3Q9Y3E7 222 aa12.46□□□□□ -0.42
GABPA-201ENST00000354828 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
GABPA-201ENST00000354828 ESCO1Q5FWF5 840 aa12.45□□□□□ -0.42
GABPA-201ENST00000354828 KCNJ4P48050 445 aa12.45□□□□□ -0.42
GABPA-201ENST00000354828 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
GABPA-201ENST00000354828 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
GABPA-201ENST00000354828 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
GABPA-201ENST00000354828 NUTM2GQ5VZR2 741 aa12.44□□□□□ -0.42
GABPA-201ENST00000354828 CD109Q6YHK3 1445 aa12.44□□□□□ -0.42
GABPA-201ENST00000354828 FGD1P98174 961 aa12.44□□□□□ -0.42
GABPA-201ENST00000354828 CGNL1Q0VF96 1302 aa12.43□□□□□ -0.42
GABPA-201ENST00000354828 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
GABPA-201ENST00000354828 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
GABPA-201ENST00000354828 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
GABPA-201ENST00000354828 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
GABPA-201ENST00000354828 TULP1O00294 542 aaPredicted RBP12.42□□□□□ -0.42
GABPA-201ENST00000354828 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
GABPA-201ENST00000354828 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
GABPA-201ENST00000354828 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
GABPA-201ENST00000354828 ANP32BQ92688 251 aaKnown RBP12.42□□□□□ -0.42
GABPA-201ENST00000354828 PANK3Q9H999 370 aa12.42□□□□□ -0.42
GABPA-201ENST00000354828 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
GABPA-201ENST00000354828 SUPT16HQ9Y5B9 1047 aaKnown RBP12.42□□□□□ -0.42
GABPA-201ENST00000354828 CENPJQ9HC77 1338 aaPredicted RBP12.41□□□□□ -0.42
GABPA-201ENST00000354828 PLEKHH2Q8IVE3 1493 aa12.41□□□□□ -0.42
GABPA-201ENST00000354828 TEFQ10587 303 aa12.41□□□□□ -0.42
GABPA-201ENST00000354828 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
GABPA-201ENST00000354828 APBB1O00213 710 aa12.41□□□□□ -0.42
GABPA-201ENST00000354828 NLRP2Q9NX02 1062 aa12.41□□□□□ -0.42
GABPA-201ENST00000354828 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
GABPA-201ENST00000354828 NAP1L2Q9ULW6 460 aaPredicted RBP12.41□□□□□ -0.42
GABPA-201ENST00000354828 EHBP1L1Q8N3D4 1523 aa12.4□□□□□ -0.42
GABPA-201ENST00000354828 TTC5Q8N0Z6 440 aa12.4□□□□□ -0.42
GABPA-201ENST00000354828 GPRASP1Q5JY77 1395 aa12.4□□□□□ -0.42
GABPA-201ENST00000354828 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.42
GABPA-201ENST00000354828 CDK13Q14004 1512 aaKnown RBP12.39□□□□□ -0.43
GABPA-201ENST00000354828 NLRP6P59044 892 aa12.39□□□□□ -0.43
GABPA-201ENST00000354828 GORABQ5T7V8 394 aa12.39□□□□□ -0.43
GABPA-201ENST00000354828 RGS3P49796 1198 aa12.39□□□□□ -0.43
GABPA-201ENST00000354828 MIA2Q96PC5 1412 aa12.39□□□□□ -0.43
GABPA-201ENST00000354828 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
GABPA-201ENST00000354828 STAC3Q96MF2 364 aa12.39□□□□□ -0.43
GABPA-201ENST00000354828 SLC52A1Q9NWF4 448 aa12.39□□□□□ -0.43
GABPA-201ENST00000354828 KIF21AQ7Z4S6 1674 aa12.39□□□□□ -0.43
GABPA-201ENST00000354828 WDR62O43379 1518 aa12.38□□□□□ -0.43
GABPA-201ENST00000354828 SLC4A10Q6U841 1118 aa12.38□□□□□ -0.43
GABPA-201ENST00000354828 EIF5BO60841 1220 aaKnown RBP12.37□□□□□ -0.43
GABPA-201ENST00000354828 CDK11BP21127 795 aaKnown RBP12.37□□□□□ -0.43
GABPA-201ENST00000354828 CABP2Q9NPB3 220 aa12.37□□□□□ -0.43
GABPA-201ENST00000354828 SF3B2Q13435 895 aaKnown RBP12.36□□□□□ -0.43
GABPA-201ENST00000354828 PMFBP1Q8TBY8 1022 aa12.36□□□□□ -0.43
GABPA-201ENST00000354828 ABTB2Q8N961 1025 aa12.36□□□□□ -0.43
GABPA-201ENST00000354828 FRAT2O75474 233 aaPredicted RBP12.36□□□□□ -0.43
GABPA-201ENST00000354828 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
GABPA-201ENST00000354828 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
GABPA-201ENST00000354828 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
GABPA-201ENST00000354828 STRN4Q9NRL3 753 aa12.36□□□□□ -0.43
GABPA-201ENST00000354828 CFAP70Q5T0N1 1121 aa12.35□□□□□ -0.43
GABPA-201ENST00000354828 NLRP13Q86W25 1043 aa12.35□□□□□ -0.43
GABPA-201ENST00000354828 C9orf84Q5VXU9 1444 aa12.35□□□□□ -0.43
GABPA-201ENST00000354828 RRP7AQ9Y3A4 280 aaKnown RBP12.34□□□□□ -0.43
GABPA-201ENST00000354828 ITPRIPQ8IWB1 547 aa12.34□□□□□ -0.43
GABPA-201ENST00000354828 CEBPAP49715 358 aaPredicted RBP12.34□□□□□ -0.43
GABPA-201ENST00000354828 TIAM1Q13009 1591 aa12.34□□□□□ -0.43
GABPA-201ENST00000354828 USP47Q96K76 1375 aa12.34□□□□□ -0.43
GABPA-201ENST00000354828 SMC4Q9NTJ3 1288 aa12.34□□□□□ -0.43
GABPA-201ENST00000354828 ARHGEF11O15085 1522 aa12.33□□□□□ -0.44
GABPA-201ENST00000354828 NCLP19338 710 aaKnown RBP12.33□□□□□ -0.44
GABPA-201ENST00000354828 BECN1Q14457 450 aa12.33□□□□□ -0.44
GABPA-201ENST00000354828 PRAM1Q96QH2 718 aa12.33□□□□□ -0.44
GABPA-201ENST00000354828 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
GABPA-201ENST00000354828 DIAPH1O60610 1272 aaKnown RBP12.32□□□□□ -0.44
GABPA-201ENST00000354828 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
GABPA-201ENST00000354828 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
GABPA-201ENST00000354828 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
GABPA-201ENST00000354828 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
GABPA-201ENST00000354828 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
GABPA-201ENST00000354828 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
GABPA-201ENST00000354828 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms