RNA–Protein interactions for RNA: ENST00000349004.5

NDRG3-201, Transcript of NDRG family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NDRG3, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG3-201ENST00000349004 CLTCQ00610 1675 aaKnown RBP8.53□□□□□ -1.04
NDRG3-201ENST00000349004 PTPRKQ15262 1439 aa8.52□□□□□ -1.04
NDRG3-201ENST00000349004 SRCAPQ6ZRS2 3230 aa8.52□□□□□ -1.04
NDRG3-201ENST00000349004 PTPN23Q9H3S7 1636 aa8.52□□□□□ -1.04
NDRG3-201ENST00000349004 DHX29Q7Z478 1369 aaKnown RBP8.52□□□□□ -1.05
NDRG3-201ENST00000349004 CHGAP10645 457 aaKnown RBP8.52□□□□□ -1.05
NDRG3-201ENST00000349004 INO80Q9ULG1 1556 aaPredicted RBP8.51□□□□□ -1.05
NDRG3-201ENST00000349004 DAPK1P53355 1430 aa8.51□□□□□ -1.05
NDRG3-201ENST00000349004 C3P01024 1663 aa8.5□□□□□ -1.05
NDRG3-201ENST00000349004 FOXD1Q16676 465 aa8.5□□□□□ -1.05
NDRG3-201ENST00000349004 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
NDRG3-201ENST00000349004 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
NDRG3-201ENST00000349004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.49□□□□□ -1.05
NDRG3-201ENST00000349004 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
NDRG3-201ENST00000349004 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
NDRG3-201ENST00000349004 STAG3Q9UJ98 1225 aa8.49□□□□□ -1.05
NDRG3-201ENST00000349004 ADGBQ8N7X0 1667 aa8.49□□□□□ -1.05
NDRG3-201ENST00000349004 ZNF335Q9H4Z2 1342 aaPredicted RBP8.48□□□□□ -1.05
NDRG3-201ENST00000349004 BCANQ96GW7 911 aa8.48□□□□□ -1.05
NDRG3-201ENST00000349004 TRIM52Q96A61 297 aa8.48□□□□□ -1.05
NDRG3-201ENST00000349004 YTHDC1Q96MU7 727 aaKnown RBP8.48□□□□□ -1.05
NDRG3-201ENST00000349004 RSPH4AQ5TD94 716 aa8.47□□□□□ -1.05
NDRG3-201ENST00000349004 MIA2Q96PC5 1412 aa8.47□□□□□ -1.05
NDRG3-201ENST00000349004 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
NDRG3-201ENST00000349004 PLXNC1O60486 1568 aa8.45□□□□□ -1.06
NDRG3-201ENST00000349004 ANKRD30AQ9BXX3 1397 aa8.45□□□□□ -1.06
NDRG3-201ENST00000349004 MAP3K1Q13233 1512 aa8.45□□□□□ -1.06
NDRG3-201ENST00000349004 RTEL1-TNFRSF6BF6WH68 1400 aa8.45□□□□□ -1.06
NDRG3-201ENST00000349004 NCOA1Q15788 1441 aa8.45□□□□□ -1.06
NDRG3-201ENST00000349004 KCNA4P22459 653 aa8.44□□□□□ -1.06
NDRG3-201ENST00000349004 PIP4K2BP78356 416 aa8.44□□□□□ -1.06
NDRG3-201ENST00000349004 SLC26A8Q96RN1 970 aa8.44□□□□□ -1.06
NDRG3-201ENST00000349004 TNRQ92752 1358 aa8.44□□□□□ -1.06
NDRG3-201ENST00000349004 CEP152O94986 1710 aa8.44□□□□□ -1.06
NDRG3-201ENST00000349004 ZNF316A6NFI3 1004 aaPredicted RBP8.44□□□□□ -1.06
NDRG3-201ENST00000349004 AGLP35573 1532 aa8.43□□□□□ -1.06
NDRG3-201ENST00000349004 CAMSAP1Q5T5Y3 1602 aa8.43□□□□□ -1.06
NDRG3-201ENST00000349004 IDI1Q13907 227 aa8.43□□□□□ -1.06
NDRG3-201ENST00000349004 ANKRD50Q9ULJ7 1429 aa8.43□□□□□ -1.06
NDRG3-201ENST00000349004 SETD1BQ9UPS6 1966 aaKnown RBP8.43□□□□□ -1.06
NDRG3-201ENST00000349004 ARHGEF5Q12774 1597 aa8.43□□□□□ -1.06
NDRG3-201ENST00000349004 MIER1Q8N108 512 aa8.43□□□□□ -1.06
NDRG3-201ENST00000349004 LTKP29376 864 aa8.42□□□□□ -1.06
NDRG3-201ENST00000349004 NUP155O75694 1391 aa8.42□□□□□ -1.06
NDRG3-201ENST00000349004 DNMT1P26358 1616 aaKnown RBP8.42□□□□□ -1.06
NDRG3-201ENST00000349004 UGGT1Q9NYU2 1555 aa8.41□□□□□ -1.06
NDRG3-201ENST00000349004 CERKQ8TCT0 537 aa8.41□□□□□ -1.06
NDRG3-201ENST00000349004 STRCQ7RTU9 1775 aa8.41□□□□□ -1.06
NDRG3-201ENST00000349004 PREX1Q8TCU6 1659 aa8.41□□□□□ -1.06
NDRG3-201ENST00000349004 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
NDRG3-201ENST00000349004 TXNDC2Q86VQ3 553 aa8.4□□□□□ -1.06
NDRG3-201ENST00000349004 PPP6R1Q9UPN7 881 aa8.4□□□□□ -1.06
NDRG3-201ENST00000349004 ABCC3O15438 1527 aa8.4□□□□□ -1.06
NDRG3-201ENST00000349004 NPATQ14207 1427 aa8.4□□□□□ -1.06
NDRG3-201ENST00000349004 REREQ9P2R6 1566 aa8.4□□□□□ -1.06
NDRG3-201ENST00000349004 KDM5DQ9BY66 1539 aa8.4□□□□□ -1.06
NDRG3-201ENST00000349004 TCOF1Q13428 1488 aaKnown RBP8.4□□□□□ -1.07
NDRG3-201ENST00000349004 DUOX2Q9NRD8 1548 aa8.4□□□□□ -1.07
NDRG3-201ENST00000349004 MROH1Q8NDA8 1641 aa8.39□□□□□ -1.07
NDRG3-201ENST00000349004 KANK1Q14678 1352 aa8.39□□□□□ -1.07
NDRG3-201ENST00000349004 ZNF326Q5BKZ1 582 aaKnown RBP8.39□□□□□ -1.07
NDRG3-201ENST00000349004 CROCC2H7BZ55 1655 aa8.38□□□□□ -1.07
NDRG3-201ENST00000349004 MYO3AQ8NEV4 1616 aa8.38□□□□□ -1.07
NDRG3-201ENST00000349004 RGL3Q3MIN7 710 aa8.38□□□□□ -1.07
NDRG3-201ENST00000349004 ANKLE2Q86XL3 938 aa8.38□□□□□ -1.07
NDRG3-201ENST00000349004 UBAP1LF5GYI3 381 aa8.38□□□□□ -1.07
NDRG3-201ENST00000349004 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
NDRG3-201ENST00000349004 THEMISQ8N1K5 641 aaPredicted RBP8.38□□□□□ -1.07
NDRG3-201ENST00000349004 CEP170BQ9Y4F5 1589 aaPredicted RBP8.38□□□□□ -1.07
NDRG3-201ENST00000349004 SLC4A1APQ9BWU0 796 aaKnown RBP8.37□□□□□ -1.07
NDRG3-201ENST00000349004 PZPP20742 1482 aa8.37□□□□□ -1.07
NDRG3-201ENST00000349004 PKD2Q13563 968 aa8.37□□□□□ -1.07
NDRG3-201ENST00000349004 ERVK-7P63135 1459 aa8.36□□□□□ -1.07
NDRG3-201ENST00000349004 ERBINQ96RT1 1412 aa8.35□□□□□ -1.07
NDRG3-201ENST00000349004 MAST1Q9Y2H9 1570 aa8.35□□□□□ -1.07
NDRG3-201ENST00000349004 DMRT2Q9Y5R5 561 aa8.35□□□□□ -1.07
NDRG3-201ENST00000349004 SHANK2Q9UPX8 1470 aa8.35□□□□□ -1.07
NDRG3-201ENST00000349004 PRDM15P57071 1507 aaPredicted RBP8.35□□□□□ -1.07
NDRG3-201ENST00000349004 CENPBP07199 599 aaPredicted RBP8.34□□□□□ -1.07
NDRG3-201ENST00000349004 FBXO41Q8TF61 875 aa8.34□□□□□ -1.07
NDRG3-201ENST00000349004 DHX57Q6P158 1386 aaKnown RBP8.34□□□□□ -1.07
NDRG3-201ENST00000349004 ERICH6Q7L0X2 663 aa8.34□□□□□ -1.08
NDRG3-201ENST00000349004 FAM135AQ9P2D6 1515 aa8.33□□□□□ -1.08
NDRG3-201ENST00000349004 A2ML1A8K2U0 1454 aa8.33□□□□□ -1.08
NDRG3-201ENST00000349004 PLEKHG5O94827 1062 aa8.33□□□□□ -1.08
NDRG3-201ENST00000349004 EID1Q9Y6B2 187 aa8.33□□□□□ -1.08
NDRG3-201ENST00000349004 NAIPQ13075 1403 aa8.33□□□□□ -1.08
NDRG3-201ENST00000349004 C14orf37Q86TY3 774 aa8.32□□□□□ -1.08
NDRG3-201ENST00000349004 MROH2AA6NES4 1674 aa8.32□□□□□ -1.08
NDRG3-201ENST00000349004 RNF17Q9BXT8 1623 aaKnown RBP8.32□□□□□ -1.08
NDRG3-201ENST00000349004 RRBP1Q9P2E9 1410 aaKnown RBP8.32□□□□□ -1.08
NDRG3-201ENST00000349004 PIK3C2BO00750 1634 aa8.31□□□□□ -1.08
NDRG3-201ENST00000349004 ADGRL2O95490 1459 aa8.31□□□□□ -1.08
NDRG3-201ENST00000349004 SYNMO15061 1565 aa8.31□□□□□ -1.08
NDRG3-201ENST00000349004 NPHP4O75161 1426 aaPredicted RBP8.31□□□□□ -1.08
NDRG3-201ENST00000349004 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
NDRG3-201ENST00000349004 MYO5BQ9ULV0 1848 aa8.3□□□□□ -1.08
NDRG3-201ENST00000349004 TIMELESSQ9UNS1 1208 aa8.3□□□□□ -1.08
NDRG3-201ENST00000349004 KDM2AQ9Y2K7 1162 aa8.29□□□□□ -1.08
NDRG3-201ENST00000349004 TMEM2Q9UHN6 1383 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms