RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 PMFBP1Q8TBY8 1022 aa19.4■□□□□ 0.7
PTPRO-202ENST00000348962 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.69
PTPRO-202ENST00000348962 ST20-MTHFSA0A0A6YYL1 179 aa19.39■□□□□ 0.69
PTPRO-202ENST00000348962 PHLDB1Q86UU1 1377 aa19.39■□□□□ 0.69
PTPRO-202ENST00000348962 TEFQ10587 303 aa19.38■□□□□ 0.69
PTPRO-202ENST00000348962 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
PTPRO-202ENST00000348962 MINK1Q8N4C8 1332 aaPredicted RBP19.37■□□□□ 0.69
PTPRO-202ENST00000348962 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
PTPRO-202ENST00000348962 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
PTPRO-202ENST00000348962 PSME1Q06323 249 aa19.36■□□□□ 0.69
PTPRO-202ENST00000348962 HTATSF1O43719 755 aaKnown RBP19.35■□□□□ 0.69
PTPRO-202ENST00000348962 CENPJQ9HC77 1338 aaPredicted RBP19.35■□□□□ 0.69
PTPRO-202ENST00000348962 ERICH6BQ5W0A0 696 aa19.35■□□□□ 0.69
PTPRO-202ENST00000348962 TRIM6-TRIM34B2RNG4 842 aa19.34■□□□□ 0.69
PTPRO-202ENST00000348962 PANK3Q9H999 370 aa19.34■□□□□ 0.69
PTPRO-202ENST00000348962 TTC5Q8N0Z6 440 aa19.33■□□□□ 0.69
PTPRO-202ENST00000348962 CLUAP1Q96AJ1 413 aa19.33■□□□□ 0.69
PTPRO-202ENST00000348962 MEX3CQ5U5Q3 659 aaKnown RBP19.33■□□□□ 0.68
PTPRO-202ENST00000348962 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.68
PTPRO-202ENST00000348962 MSH5O43196 834 aa19.33■□□□□ 0.68
PTPRO-202ENST00000348962 ATF3P18847 181 aa19.32■□□□□ 0.68
PTPRO-202ENST00000348962 CCDC34Q96HJ3 373 aa19.31■□□□□ 0.68
PTPRO-202ENST00000348962 KIF15Q9NS87 1388 aa19.31■□□□□ 0.68
PTPRO-202ENST00000348962 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
PTPRO-202ENST00000348962 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
PTPRO-202ENST00000348962 IGF1RP08069 1367 aa19.29■□□□□ 0.68
PTPRO-202ENST00000348962 MYOM3Q5VTT5 1437 aa19.28■□□□□ 0.68
PTPRO-202ENST00000348962 NEXNQ0ZGT2 675 aa19.28■□□□□ 0.68
PTPRO-202ENST00000348962 TOMM22Q9NS69 142 aa19.28■□□□□ 0.68
PTPRO-202ENST00000348962 L1TD1Q5T7N2 865 aaKnown RBP19.27■□□□□ 0.68
PTPRO-202ENST00000348962 SPRYD3Q8NCJ5 442 aa19.27■□□□□ 0.68
PTPRO-202ENST00000348962 MYBBP1AQ9BQG0 1328 aaKnown RBP19.27■□□□□ 0.68
PTPRO-202ENST00000348962 CHAF1AQ13111 956 aaPredicted RBP19.25■□□□□ 0.67
PTPRO-202ENST00000348962 RRP7AQ9Y3A4 280 aaKnown RBP19.25■□□□□ 0.67
PTPRO-202ENST00000348962 HSP90B1P14625 803 aaKnown RBP19.25■□□□□ 0.67
PTPRO-202ENST00000348962 ELL2O00472 640 aaPredicted RBP19.24■□□□□ 0.67
PTPRO-202ENST00000348962 DRC7Q8IY82 874 aa19.24■□□□□ 0.67
PTPRO-202ENST00000348962 GBP4Q96PP9 640 aa19.24■□□□□ 0.67
PTPRO-202ENST00000348962 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
PTPRO-202ENST00000348962 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
PTPRO-202ENST00000348962 SYTL4Q96C24 671 aaPredicted RBP19.23■□□□□ 0.67
PTPRO-202ENST00000348962 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
PTPRO-202ENST00000348962 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
PTPRO-202ENST00000348962 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
PTPRO-202ENST00000348962 PTMSP20962 102 aa19.22■□□□□ 0.67
PTPRO-202ENST00000348962 KIF3AQ9Y496 699 aa19.22■□□□□ 0.67
PTPRO-202ENST00000348962 AQRO60306 1485 aaKnown RBP eCLIP19.21■□□□□ 0.67
PTPRO-202ENST00000348962 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
PTPRO-202ENST00000348962 RAPGEF4Q8WZA2 1011 aa19.21■□□□□ 0.67
PTPRO-202ENST00000348962 KIAA2012Q0VF49 1180 aa19.19■□□□□ 0.66
PTPRO-202ENST00000348962 LRRFIP1Q32MZ4 808 aaKnown RBP19.19■□□□□ 0.66
PTPRO-202ENST00000348962 RASSF8Q8NHQ8 419 aa19.19■□□□□ 0.66
PTPRO-202ENST00000348962 MFAP1P55081 439 aaKnown RBP19.19■□□□□ 0.66
PTPRO-202ENST00000348962 USP47Q96K76 1375 aa19.18■□□□□ 0.66
PTPRO-202ENST00000348962 DDX58O95786 925 aaKnown RBP19.18■□□□□ 0.66
PTPRO-202ENST00000348962 EIF2S2P20042 333 aaKnown RBP19.18■□□□□ 0.66
PTPRO-202ENST00000348962 E9PSI1 815 aa19.18■□□□□ 0.66
PTPRO-202ENST00000348962 NGEFQ8N5V2 710 aa19.18■□□□□ 0.66
PTPRO-202ENST00000348962 C9orf78Q9NZ63 289 aaPredicted RBP19.17■□□□□ 0.66
PTPRO-202ENST00000348962 SYAP1Q96A49 352 aaPredicted RBP19.17■□□□□ 0.66
PTPRO-202ENST00000348962 NOL10Q9BSC4 688 aaKnown RBP19.16■□□□□ 0.66
PTPRO-202ENST00000348962 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
PTPRO-202ENST00000348962 CHMP4CQ96CF2 233 aa19.16■□□□□ 0.66
PTPRO-202ENST00000348962 MARCH6O60337 910 aa19.16■□□□□ 0.66
PTPRO-202ENST00000348962 ZKSCAN2Q63HK3 967 aa19.15■□□□□ 0.66
PTPRO-202ENST00000348962 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
PTPRO-202ENST00000348962 AMOTL1Q8IY63 956 aa19.13■□□□□ 0.65
PTPRO-202ENST00000348962 TPM4P67936 248 aa19.13■□□□□ 0.65
PTPRO-202ENST00000348962 NLRP2Q9NX02 1062 aa19.13■□□□□ 0.65
PTPRO-202ENST00000348962 CSPP1Q1MSJ5 1256 aa19.13■□□□□ 0.65
PTPRO-202ENST00000348962 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
PTPRO-202ENST00000348962 ZNF644Q9H582 1327 aaPredicted RBP19.13■□□□□ 0.65
PTPRO-202ENST00000348962 KIF16BQ96L93 1317 aa19.12■□□□□ 0.65
PTPRO-202ENST00000348962 TXNDC2Q86VQ3 553 aa19.12■□□□□ 0.65
PTPRO-202ENST00000348962 ST18O60284 1047 aa19.11■□□□□ 0.65
PTPRO-202ENST00000348962 MSNP26038 577 aaKnown RBP19.11■□□□□ 0.65
PTPRO-202ENST00000348962 VPS53Q5VIR6 699 aa19.11■□□□□ 0.65
PTPRO-202ENST00000348962 BCL2L13Q9BXK5 485 aa19.1■□□□□ 0.65
PTPRO-202ENST00000348962 MIA2Q96PC5 1412 aa19.1■□□□□ 0.65
PTPRO-202ENST00000348962 NLRP6P59044 892 aa19.1■□□□□ 0.65
PTPRO-202ENST00000348962 PROSER2Q86WR7 435 aaPredicted RBP19.1■□□□□ 0.65
PTPRO-202ENST00000348962 TRIM34Q9BYJ4 488 aa19.1■□□□□ 0.65
PTPRO-202ENST00000348962 API5Q9BZZ5 524 aaKnown RBP19.1■□□□□ 0.65
PTPRO-202ENST00000348962 SLKQ9H2G2 1235 aaPredicted RBP19.1■□□□□ 0.65
PTPRO-202ENST00000348962 APAF1O14727 1248 aa19.09■□□□□ 0.65
PTPRO-202ENST00000348962 RIPK4P57078 832 aa19.09■□□□□ 0.65
PTPRO-202ENST00000348962 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
PTPRO-202ENST00000348962 ANKRD50Q9ULJ7 1429 aa19.09■□□□□ 0.65
PTPRO-202ENST00000348962 VPS37DQ86XT2 251 aa19.09■□□□□ 0.65
PTPRO-202ENST00000348962 THEMISQ8N1K5 641 aaPredicted RBP19.09■□□□□ 0.65
PTPRO-202ENST00000348962 AKAP17AQ02040 695 aaKnown RBP19.09■□□□□ 0.65
PTPRO-202ENST00000348962 RILPL2Q969X0 211 aa19.09■□□□□ 0.65
PTPRO-202ENST00000348962 NAP1L5Q96NT1 182 aaPredicted RBP19.09■□□□□ 0.65
PTPRO-202ENST00000348962 PRKRIP1Q9H875 184 aaPredicted RBP19.09■□□□□ 0.65
PTPRO-202ENST00000348962 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.65
PTPRO-202ENST00000348962 SYNE3Q6ZMZ3 975 aa19.07■□□□□ 0.64
PTPRO-202ENST00000348962 PRG4Q92954 1404 aaPredicted RBP19.07■□□□□ 0.64
PTPRO-202ENST00000348962 SYNJ2O15056 1496 aa19.07■□□□□ 0.64
PTPRO-202ENST00000348962 SF3A1Q15459 793 aaKnown RBP19.07■□□□□ 0.64
PTPRO-202ENST00000348962 ANKRD45Q5TZF3 282 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms