RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
TRAF3-201ENST00000347662 ANKRD30AQ9BXX3 1397 aa14.74□□□□□ -0.05
TRAF3-201ENST00000347662 TSR1Q2NL82 804 aaKnown RBP14.73□□□□□ -0.05
TRAF3-201ENST00000347662 ROCK2O75116 1388 aaKnown RBP14.73□□□□□ -0.05
TRAF3-201ENST00000347662 MSH5O43196 834 aa14.72□□□□□ -0.05
TRAF3-201ENST00000347662 U2AF1L5P0DN76 240 aaPredicted RBP14.71□□□□□ -0.05
TRAF3-201ENST00000347662 U2AF1Q01081 240 aaKnown RBP eCLIP14.71□□□□□ -0.05
TRAF3-201ENST00000347662 TRAK1Q9UPV9 953 aa14.71□□□□□ -0.05
TRAF3-201ENST00000347662 SETD5Q9C0A6 1442 aa14.71□□□□□ -0.05
TRAF3-201ENST00000347662 GTF2E1P29083 439 aaPredicted RBP14.71□□□□□ -0.06
TRAF3-201ENST00000347662 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.06
TRAF3-201ENST00000347662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.06
TRAF3-201ENST00000347662 SYAP1Q96A49 352 aaPredicted RBP14.7□□□□□ -0.06
TRAF3-201ENST00000347662 B4GALNT3Q6L9W6 998 aa14.7□□□□□ -0.06
TRAF3-201ENST00000347662 PTPRGP23470 1445 aa14.7□□□□□ -0.06
TRAF3-201ENST00000347662 VPS8Q8N3P4 1428 aa14.7□□□□□ -0.06
TRAF3-201ENST00000347662 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRAF3-201ENST00000347662 TRIM6-TRIM34B2RNG4 842 aa14.69□□□□□ -0.06
TRAF3-201ENST00000347662 NOL8Q76FK4 1167 aaKnown RBP14.69□□□□□ -0.06
TRAF3-201ENST00000347662 TRIM34Q9BYJ4 488 aa14.69□□□□□ -0.06
TRAF3-201ENST00000347662 HSPA5P11021 654 aaKnown RBP14.68□□□□□ -0.06
TRAF3-201ENST00000347662 RAPGEF2Q9Y4G8 1499 aa14.68□□□□□ -0.06
TRAF3-201ENST00000347662 GPATCH3Q96I76 525 aa14.68□□□□□ -0.06
TRAF3-201ENST00000347662 TPM2P07951 284 aa14.68□□□□□ -0.06
TRAF3-201ENST00000347662 GBP4Q96PP9 640 aa14.68□□□□□ -0.06
TRAF3-201ENST00000347662 PCMTD1Q96MG8 357 aaPredicted RBP14.67□□□□□ -0.06
TRAF3-201ENST00000347662 SF3A1Q15459 793 aaKnown RBP14.66□□□□□ -0.06
TRAF3-201ENST00000347662 CFAP44Q96MT7 982 aa14.66□□□□□ -0.06
TRAF3-201ENST00000347662 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
TRAF3-201ENST00000347662 AMPHP49418 695 aa14.66□□□□□ -0.06
TRAF3-201ENST00000347662 CCDC70Q6NSX1 233 aa14.66□□□□□ -0.06
TRAF3-201ENST00000347662 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
TRAF3-201ENST00000347662 PAF1Q8N7H5 531 aa14.66□□□□□ -0.06
TRAF3-201ENST00000347662 VSIG10Q8N0Z9 540 aa14.66□□□□□ -0.06
TRAF3-201ENST00000347662 CCDC18Q5T9S5 1454 aa14.64□□□□□ -0.07
TRAF3-201ENST00000347662 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
TRAF3-201ENST00000347662 RAB3GAP2Q9H2M9 1393 aa14.62□□□□□ -0.07
TRAF3-201ENST00000347662 FOXD4L5Q5VV16 416 aaPredicted RBP14.62□□□□□ -0.07
TRAF3-201ENST00000347662 FOXD4L4Q8WXT5 416 aaPredicted RBP14.62□□□□□ -0.07
TRAF3-201ENST00000347662 EVA1CP58658 441 aa14.62□□□□□ -0.07
TRAF3-201ENST00000347662 ODF2Q5BJF6 829 aa14.62□□□□□ -0.07
TRAF3-201ENST00000347662 FBXW7Q969H0 707 aa14.62□□□□□ -0.07
TRAF3-201ENST00000347662 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
TRAF3-201ENST00000347662 CSPP1Q1MSJ5 1256 aa14.62□□□□□ -0.07
TRAF3-201ENST00000347662 TERF2IPQ9NYB0 399 aa14.61□□□□□ -0.07
TRAF3-201ENST00000347662 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
TRAF3-201ENST00000347662 RSPH4AQ5TD94 716 aa14.61□□□□□ -0.07
TRAF3-201ENST00000347662 APPP05067 770 aa14.6□□□□□ -0.07
TRAF3-201ENST00000347662 AKAP17AQ02040 695 aaKnown RBP14.6□□□□□ -0.07
TRAF3-201ENST00000347662 TPM1P09493 284 aa14.59□□□□□ -0.07
TRAF3-201ENST00000347662 SLKQ9H2G2 1235 aaPredicted RBP14.59□□□□□ -0.07
TRAF3-201ENST00000347662 DEKP35659 375 aaKnown RBP14.58□□□□□ -0.07
TRAF3-201ENST00000347662 CCDC43Q96MW1 224 aaKnown RBP14.58□□□□□ -0.07
TRAF3-201ENST00000347662 RAD54L2Q9Y4B4 1467 aa14.58□□□□□ -0.08
TRAF3-201ENST00000347662 CT47A1Q5JQC4 288 aaPredicted RBP14.58□□□□□ -0.08
TRAF3-201ENST00000347662 ZFYVE27Q5T4F4 411 aa14.58□□□□□ -0.08
TRAF3-201ENST00000347662 MEX3CQ5U5Q3 659 aaKnown RBP14.58□□□□□ -0.08
TRAF3-201ENST00000347662 KTN1Q86UP2 1357 aaKnown RBP14.58□□□□□ -0.08
TRAF3-201ENST00000347662 H3BQV1 296 aa14.58□□□□□ -0.08
TRAF3-201ENST00000347662 IFFO2Q5TF58 517 aa14.58□□□□□ -0.08
TRAF3-201ENST00000347662 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
TRAF3-201ENST00000347662 L3MBTL2Q969R5 705 aa14.57□□□□□ -0.08
TRAF3-201ENST00000347662 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
TRAF3-201ENST00000347662 ITPRIPQ8IWB1 547 aa14.57□□□□□ -0.08
TRAF3-201ENST00000347662 GPS2Q13227 327 aa14.57□□□□□ -0.08
TRAF3-201ENST00000347662 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
TRAF3-201ENST00000347662 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.084e-6■■■■■ 31
TRAF3-201ENST00000347662 MINK1Q8N4C8 1332 aaPredicted RBP14.55□□□□□ -0.08
TRAF3-201ENST00000347662 PPP4R2Q9NY27 417 aa14.55□□□□□ -0.08
TRAF3-201ENST00000347662 RUSC2Q8N2Y8 1516 aa14.55□□□□□ -0.08
TRAF3-201ENST00000347662 MAP7D2Q96T17 732 aa14.55□□□□□ -0.08
TRAF3-201ENST00000347662 ZNF771Q7L3S4 317 aaPredicted RBP14.55□□□□□ -0.08
TRAF3-201ENST00000347662 DHX16O60231 1041 aaKnown RBP14.55□□□□□ -0.08
TRAF3-201ENST00000347662 CCDC146Q8IYE0 955 aa14.55□□□□□ -0.08
TRAF3-201ENST00000347662 ZNF592Q92610 1267 aa14.55□□□□□ -0.08
TRAF3-201ENST00000347662 R3HCC1Q9Y3T6 440 aaKnown RBP14.54□□□□□ -0.08
TRAF3-201ENST00000347662 CALD1Q05682 793 aaKnown RBP14.54□□□□□ -0.08
TRAF3-201ENST00000347662 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
TRAF3-201ENST00000347662 NOL10Q9BSC4 688 aaKnown RBP14.54□□□□□ -0.08
TRAF3-201ENST00000347662 KIF16BQ96L93 1317 aa14.54□□□□□ -0.08
TRAF3-201ENST00000347662 NAP1L1P55209 391 aaKnown RBP14.54□□□□□ -0.08
TRAF3-201ENST00000347662 EIF3AQ14152 1382 aaKnown RBP14.54□□□□□ -0.08
TRAF3-201ENST00000347662 AK7Q96M32 723 aa14.53□□□□□ -0.08
TRAF3-201ENST00000347662 GOLGA6L19H0YKK7 550 aa14.53□□□□□ -0.08
TRAF3-201ENST00000347662 SYTL4Q96C24 671 aaPredicted RBP14.53□□□□□ -0.08
TRAF3-201ENST00000347662 AMOTL1Q8IY63 956 aa14.53□□□□□ -0.08
TRAF3-201ENST00000347662 IPO8O15397 1037 aaKnown RBP14.53□□□□□ -0.08
TRAF3-201ENST00000347662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.52□□□□□ -0.08
TRAF3-201ENST00000347662 MFAP1P55081 439 aaKnown RBP14.52□□□□□ -0.08
TRAF3-201ENST00000347662 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.08
TRAF3-201ENST00000347662 PHF14O94880 888 aa14.52□□□□□ -0.08
TRAF3-201ENST00000347662 PLCD4Q9BRC7 762 aa14.52□□□□□ -0.09
TRAF3-201ENST00000347662 FOXD4L6Q3SYB3 417 aaPredicted RBP14.52□□□□□ -0.09
TRAF3-201ENST00000347662 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.09
TRAF3-201ENST00000347662 FOXD4L3Q6VB84 417 aaPredicted RBP14.52□□□□□ -0.09
TRAF3-201ENST00000347662 STK31Q9BXU1 1019 aa14.51□□□□□ -0.09
TRAF3-201ENST00000347662 PSME1Q06323 249 aa14.51□□□□□ -0.09
TRAF3-201ENST00000347662 HMMRO75330 724 aa14.51□□□□□ -0.09
TRAF3-201ENST00000347662 FAM184AQ8NB25 1140 aa14.51□□□□□ -0.09
TRAF3-201ENST00000347662 CCDC97Q96F63 343 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms