RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 POLR3GLQ9BT43 218 aa32.87■■■□□ 2.85
PTPA-202ENST00000347048 UNC13BO14795 1591 aa32.87■■■□□ 2.85
PTPA-202ENST00000347048 E9PCH4 1651 aa32.87■■■□□ 2.85
PTPA-202ENST00000347048 NUDCQ9Y266 331 aa32.83■■■□□ 2.85
PTPA-202ENST00000347048 DCAF11Q8TEB1 546 aa32.81■■■□□ 2.84
PTPA-202ENST00000347048 TRPM1Q7Z4N2 1603 aa32.81■■■□□ 2.84
PTPA-202ENST00000347048 PNISRQ8TF01 805 aaKnown RBP32.8■■■□□ 2.84
PTPA-202ENST00000347048 PLXNC1O60486 1568 aa32.8■■■□□ 2.84
PTPA-202ENST00000347048 PLEKHH2Q8IVE3 1493 aa32.8■■■□□ 2.84
PTPA-202ENST00000347048 CCDC144AA2RUR9 1427 aa32.79■■■□□ 2.84
PTPA-202ENST00000347048 SYCP2Q9BX26 1530 aa32.79■■■□□ 2.84
PTPA-202ENST00000347048 ST20-MTHFSA0A0A6YYL1 179 aa32.79■■■□□ 2.84
PTPA-202ENST00000347048 BRD4O60885 1362 aaPredicted RBP32.79■■■□□ 2.84
PTPA-202ENST00000347048 RALBP1Q15311 655 aa32.78■■■□□ 2.84
PTPA-202ENST00000347048 RNF123Q5XPI4 1314 aa32.78■■■□□ 2.84
PTPA-202ENST00000347048 PRAG1Q86YV5 1406 aa32.77■■■□□ 2.84
PTPA-202ENST00000347048 KDM2AQ9Y2K7 1162 aa32.77■■■□□ 2.84
PTPA-202ENST00000347048 LAMC1P11047 1609 aa32.77■■■□□ 2.84
PTPA-202ENST00000347048 TMC1Q8TDI8 760 aa32.76■■■□□ 2.84
PTPA-202ENST00000347048 ARHGAP5Q13017 1502 aa32.76■■■□□ 2.84
PTPA-202ENST00000347048 TTC37Q6PGP7 1564 aa32.76■■■□□ 2.83
PTPA-202ENST00000347048 LRPPRCP42704 1394 aaKnown RBP32.75■■■□□ 2.83
PTPA-202ENST00000347048 MYBBP1AQ9BQG0 1328 aaKnown RBP32.74■■■□□ 2.83
PTPA-202ENST00000347048 IQGAP3Q86VI3 1631 aa32.74■■■□□ 2.83
PTPA-202ENST00000347048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.74■■■□□ 2.83
PTPA-202ENST00000347048 MYO5CQ9NQX4 1742 aa32.72■■■□□ 2.83
PTPA-202ENST00000347048 GPRASP1Q5JY77 1395 aa32.72■■■□□ 2.83
PTPA-202ENST00000347048 B4GALNT3Q6L9W6 998 aa32.69■■■□□ 2.82
PTPA-202ENST00000347048 ABCC2Q92887 1545 aa32.69■■■□□ 2.82
PTPA-202ENST00000347048 RIMBP3CA6NJZ7 1639 aa32.68■■■□□ 2.82
PTPA-202ENST00000347048 RIMBP3BA6NNM3 1639 aa32.68■■■□□ 2.82
PTPA-202ENST00000347048 RIMBP3Q9UFD9 1639 aa32.68■■■□□ 2.82
PTPA-202ENST00000347048 EIF2AK4Q9P2K8 1649 aaKnown RBP32.67■■■□□ 2.82
PTPA-202ENST00000347048 DUOX2Q9NRD8 1548 aa32.67■■■□□ 2.82
PTPA-202ENST00000347048 PLA2R1Q13018 1463 aa32.66■■■□□ 2.82
PTPA-202ENST00000347048 ATP10AO60312 1499 aa32.66■■■□□ 2.82
PTPA-202ENST00000347048 MAGI2Q86UL8 1455 aa32.65■■■□□ 2.82
PTPA-202ENST00000347048 A2MP01023 1474 aa32.63■■■□□ 2.81
PTPA-202ENST00000347048 CNGB1Q14028 1251 aaPredicted RBP32.63■■■□□ 2.81
PTPA-202ENST00000347048 PRDM15P57071 1507 aaPredicted RBP32.63■■■□□ 2.81
PTPA-202ENST00000347048 MSH5O43196 834 aa32.63■■■□□ 2.81
PTPA-202ENST00000347048 ERBINQ96RT1 1412 aa32.62■■■□□ 2.81
PTPA-202ENST00000347048 PARD3Q8TEW0 1356 aa32.6■■■□□ 2.81
PTPA-202ENST00000347048 COL17A1Q9UMD9 1497 aaPredicted RBP32.59■■■□□ 2.81
PTPA-202ENST00000347048 WASHC2CQ9Y4E1 1318 aa32.58■■■□□ 2.81
PTPA-202ENST00000347048 NLRP13Q86W25 1043 aa32.56■■■□□ 2.8
PTPA-202ENST00000347048 CYB5RLQ6IPT4 315 aa32.56■■■□□ 2.8
PTPA-202ENST00000347048 DNAJC5Q9H3Z4 198 aa32.52■■■□□ 2.8
PTPA-202ENST00000347048 INSRP06213 1382 aa32.52■■■□□ 2.8
PTPA-202ENST00000347048 PLCH2O75038 1416 aa32.51■■■□□ 2.8
PTPA-202ENST00000347048 ZMYM4Q5VZL5 1548 aa32.51■■■□□ 2.79
PTPA-202ENST00000347048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.49■■■□□ 2.79
PTPA-202ENST00000347048 NBPF1Q3BBV0 1214 aa32.48■■■□□ 2.79
PTPA-202ENST00000347048 RGL3Q3MIN7 710 aa32.48■■■□□ 2.79
PTPA-202ENST00000347048 RNF17Q9BXT8 1623 aaKnown RBP32.48■■■□□ 2.79
PTPA-202ENST00000347048 PER1O15534 1290 aaPredicted RBP32.47■■■□□ 2.79
PTPA-202ENST00000347048 UHRF1BP1LA0JNW5 1464 aa32.47■■■□□ 2.79
PTPA-202ENST00000347048 PDE3BQ13370 1112 aa32.47■■■□□ 2.79
PTPA-202ENST00000347048 CCDC136Q96JN2 1154 aa32.47■■■□□ 2.79
PTPA-202ENST00000347048 ABCC1P33527 1531 aa32.46■■■□□ 2.79
PTPA-202ENST00000347048 ERICH6Q7L0X2 663 aa32.46■■■□□ 2.79
PTPA-202ENST00000347048 TESK2Q96S53 571 aa32.44■■■□□ 2.78
PTPA-202ENST00000347048 ZCCHC11Q5TAX3 1644 aaKnown RBP32.43■■■□□ 2.78
PTPA-202ENST00000347048 EFCAB2Q5VUJ9 269 aa32.43■■■□□ 2.78
PTPA-202ENST00000347048 DISP3Q9P2K9 1392 aa32.4■■■□□ 2.78
PTPA-202ENST00000347048 TMF1P82094 1093 aa32.39■■■□□ 2.78
PTPA-202ENST00000347048 ARAP3Q8WWN8 1544 aa32.38■■■□□ 2.77
PTPA-202ENST00000347048 RTEL1-TNFRSF6BF6WH68 1400 aa32.35■■■□□ 2.77
PTPA-202ENST00000347048 RRP1P56182 461 aaKnown RBP32.35■■■□□ 2.77
PTPA-202ENST00000347048 BLMP54132 1417 aaPredicted RBP32.33■■■□□ 2.77
PTPA-202ENST00000347048 STAC3Q96MF2 364 aa32.33■■■□□ 2.77
PTPA-202ENST00000347048 MADDQ8WXG6 1647 aa32.32■■■□□ 2.76
PTPA-202ENST00000347048 TRPM2O94759 1503 aa32.31■■■□□ 2.76
PTPA-202ENST00000347048 RCAN3Q9UKA8 241 aa32.3■■■□□ 2.76
PTPA-202ENST00000347048 IQGAP1P46940 1657 aa32.3■■■□□ 2.76
PTPA-202ENST00000347048 TRAPPC8Q9Y2L5 1435 aa32.29■■■□□ 2.76
PTPA-202ENST00000347048 PANK3Q9H999 370 aa32.28■■■□□ 2.76
PTPA-202ENST00000347048 CEP152O94986 1710 aa32.27■■■□□ 2.76
PTPA-202ENST00000347048 SPHKAPQ2M3C7 1700 aa32.27■■■□□ 2.76
PTPA-202ENST00000347048 DEPDC5O75140 1603 aa32.26■■■□□ 2.75
PTPA-202ENST00000347048 ZFYVE16Q7Z3T8 1539 aa32.25■■■□□ 2.75
PTPA-202ENST00000347048 SENP3-EIF4A1A0A087X0R7 540 aa32.24■■■□□ 2.75
PTPA-202ENST00000347048 PTPRTO14522 1441 aa32.24■■■□□ 2.75
PTPA-202ENST00000347048 SCAPERQ9BY12 1400 aa32.23■■■□□ 2.75
PTPA-202ENST00000347048 SPAG9O60271 1321 aaKnown RBP32.22■■■□□ 2.75
PTPA-202ENST00000347048 CC2D1BQ5T0F9 858 aaKnown RBP32.22■■■□□ 2.75
PTPA-202ENST00000347048 MYT1LQ9UL68 1186 aa32.21■■■□□ 2.75
PTPA-202ENST00000347048 TET3O43151 1660 aa32.2■■■□□ 2.75
PTPA-202ENST00000347048 WDR7Q9Y4E6 1490 aa32.19■■■□□ 2.74
PTPA-202ENST00000347048 NEURL4Q96JN8 1562 aa32.19■■■□□ 2.74
PTPA-202ENST00000347048 SYNMO15061 1565 aa32.18■■■□□ 2.74
PTPA-202ENST00000347048 CDCA8Q53HL2 280 aa32.18■■■□□ 2.74
PTPA-202ENST00000347048 SCAF11Q99590 1463 aaKnown RBP32.17■■■□□ 2.74
PTPA-202ENST00000347048 NPM1P06748 294 aaKnown RBP eCLIP32.17■■■□□ 2.74
PTPA-202ENST00000347048 KIAA1210Q9ULL0 1709 aa32.15■■■□□ 2.74
PTPA-202ENST00000347048 CLTCL1P53675 1640 aa32.14■■■□□ 2.74
PTPA-202ENST00000347048 NOP58Q9Y2X3 529 aaKnown RBP32.14■■■□□ 2.74
PTPA-202ENST00000347048 VWDEQ8N2E2 1590 aa32.13■■■□□ 2.73
PTPA-202ENST00000347048 EXOC6Q8TAG9 804 aa32.13■■■□□ 2.73
PTPA-202ENST00000347048 INO80Q9ULG1 1556 aaPredicted RBP32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms