RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 SYCP2Q9BX26 1530 aa25.83■■□□□ 1.73
LYSMD4-202ENST00000344791 FAM135AQ9P2D6 1515 aa25.83■■□□□ 1.73
LYSMD4-202ENST00000344791 ARID4BQ4LE39 1312 aaPredicted RBP25.81■■□□□ 1.72
LYSMD4-202ENST00000344791 CC2D1BQ5T0F9 858 aaKnown RBP25.8■■□□□ 1.72
LYSMD4-202ENST00000344791 CDC42BPBQ9Y5S2 1711 aa25.79■■□□□ 1.72
LYSMD4-202ENST00000344791 SMG6Q86US8 1419 aaKnown RBP25.78■■□□□ 1.72
LYSMD4-202ENST00000344791 ERICH6Q7L0X2 663 aa25.78■■□□□ 1.72
LYSMD4-202ENST00000344791 CCDC136Q96JN2 1154 aa25.78■■□□□ 1.72
LYSMD4-202ENST00000344791 ARHGEF12Q9NZN5 1544 aa25.77■■□□□ 1.72
LYSMD4-202ENST00000344791 MYBBP1AQ9BQG0 1328 aaKnown RBP25.77■■□□□ 1.72
LYSMD4-202ENST00000344791 PLEKHH2Q8IVE3 1493 aa25.76■■□□□ 1.71
LYSMD4-202ENST00000344791 TTC37Q6PGP7 1564 aa25.75■■□□□ 1.71
LYSMD4-202ENST00000344791 KDM5DQ9BY66 1539 aa25.74■■□□□ 1.71
LYSMD4-202ENST00000344791 ARHGEF5Q12774 1597 aa25.74■■□□□ 1.71
LYSMD4-202ENST00000344791 ERCC6L2Q5T890 1561 aa25.74■■□□□ 1.71
LYSMD4-202ENST00000344791 RSPH4AQ5TD94 716 aa25.74■■□□□ 1.71
LYSMD4-202ENST00000344791 PRAG1Q86YV5 1406 aa25.72■■□□□ 1.71
LYSMD4-202ENST00000344791 PREX2Q70Z35 1606 aa25.71■■□□□ 1.71
LYSMD4-202ENST00000344791 RALBP1Q15311 655 aa25.7■■□□□ 1.71
LYSMD4-202ENST00000344791 PLA2R1Q13018 1463 aa25.7■■□□□ 1.7
LYSMD4-202ENST00000344791 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.69■■□□□ 1.7
LYSMD4-202ENST00000344791 FANCIQ9NVI1 1328 aa25.68■■□□□ 1.7
LYSMD4-202ENST00000344791 CHD1O14646 1710 aa25.68■■□□□ 1.7
LYSMD4-202ENST00000344791 KTN1Q86UP2 1357 aaKnown RBP25.67■■□□□ 1.7
LYSMD4-202ENST00000344791 DISP3Q9P2K9 1392 aa25.67■■□□□ 1.7
LYSMD4-202ENST00000344791 MYT1LQ9UL68 1186 aa25.66■■□□□ 1.7
LYSMD4-202ENST00000344791 PANK3Q9H999 370 aa25.66■■□□□ 1.7
LYSMD4-202ENST00000344791 A2MP01023 1474 aa25.66■■□□□ 1.7
LYSMD4-202ENST00000344791 BRD4O60885 1362 aaPredicted RBP25.65■■□□□ 1.7
LYSMD4-202ENST00000344791 NLRP13Q86W25 1043 aa25.65■■□□□ 1.7
LYSMD4-202ENST00000344791 AFAP1Q8N556 730 aa25.63■■□□□ 1.69
LYSMD4-202ENST00000344791 CDCA7LQ96GN5 454 aa25.63■■□□□ 1.69
LYSMD4-202ENST00000344791 TESK2Q96S53 571 aa25.61■■□□□ 1.69
LYSMD4-202ENST00000344791 PER1O15534 1290 aaPredicted RBP25.61■■□□□ 1.69
LYSMD4-202ENST00000344791 LRPPRCP42704 1394 aaKnown RBP25.6■■□□□ 1.69
LYSMD4-202ENST00000344791 EFCAB2Q5VUJ9 269 aa25.59■■□□□ 1.69
LYSMD4-202ENST00000344791 TRPM1Q7Z4N2 1603 aa25.58■■□□□ 1.69
LYSMD4-202ENST00000344791 EXOC6Q8TAG9 804 aa25.58■■□□□ 1.68
LYSMD4-202ENST00000344791 RNF123Q5XPI4 1314 aa25.57■■□□□ 1.68
LYSMD4-202ENST00000344791 TMF1P82094 1093 aa25.56■■□□□ 1.68
LYSMD4-202ENST00000344791 RCAN3Q9UKA8 241 aa25.55■■□□□ 1.68
LYSMD4-202ENST00000344791 TRAPPC8Q9Y2L5 1435 aa25.55■■□□□ 1.68
LYSMD4-202ENST00000344791 PARD3Q8TEW0 1356 aa25.55■■□□□ 1.68
LYSMD4-202ENST00000344791 PLIN1O60240 522 aa25.54■■□□□ 1.68
LYSMD4-202ENST00000344791 RRP1P56182 461 aaKnown RBP25.54■■□□□ 1.68
LYSMD4-202ENST00000344791 ABCC2Q92887 1545 aa25.53■■□□□ 1.68
LYSMD4-202ENST00000344791 ERBINQ96RT1 1412 aa25.53■■□□□ 1.68
LYSMD4-202ENST00000344791 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
LYSMD4-202ENST00000344791 MYO5CQ9NQX4 1742 aa25.51■■□□□ 1.67
LYSMD4-202ENST00000344791 UNC13BO14795 1591 aa25.5■■□□□ 1.67
LYSMD4-202ENST00000344791 COL17A1Q9UMD9 1497 aaPredicted RBP25.49■■□□□ 1.67
LYSMD4-202ENST00000344791 E9PCH4 1651 aa25.49■■□□□ 1.67
LYSMD4-202ENST00000344791 GPRASP1Q5JY77 1395 aa25.48■■□□□ 1.67
LYSMD4-202ENST00000344791 PLCH2O75038 1416 aa25.47■■□□□ 1.67
LYSMD4-202ENST00000344791 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
LYSMD4-202ENST00000344791 IQGAP3Q86VI3 1631 aa25.44■■□□□ 1.66
LYSMD4-202ENST00000344791 MAST1Q9Y2H9 1570 aa25.44■■□□□ 1.66
LYSMD4-202ENST00000344791 KNSTRNQ9Y448 316 aa25.44■■□□□ 1.66
LYSMD4-202ENST00000344791 NPM2Q86SE8 214 aaKnown RBP25.43■■□□□ 1.66
LYSMD4-202ENST00000344791 PAK3O75914 559 aaPredicted RBP25.43■■□□□ 1.66
LYSMD4-202ENST00000344791 ADAMTS8Q9UP79 889 aa25.42■■□□□ 1.66
LYSMD4-202ENST00000344791 PRDM15P57071 1507 aaPredicted RBP25.42■■□□□ 1.66
LYSMD4-202ENST00000344791 KIF3BO15066 747 aa25.42■■□□□ 1.66
LYSMD4-202ENST00000344791 NBR1Q14596 966 aa25.42■■□□□ 1.66
LYSMD4-202ENST00000344791 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
LYSMD4-202ENST00000344791 SKAP1Q86WV1 359 aa25.41■■□□□ 1.66
LYSMD4-202ENST00000344791 PLXNC1O60486 1568 aa25.41■■□□□ 1.66
LYSMD4-202ENST00000344791 ZCCHC11Q5TAX3 1644 aaKnown RBP25.39■■□□□ 1.65
LYSMD4-202ENST00000344791 NOP58Q9Y2X3 529 aaKnown RBP25.38■■□□□ 1.65
LYSMD4-202ENST00000344791 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
LYSMD4-202ENST00000344791 WDR43Q15061 677 aaKnown RBP eCLIP25.35■■□□□ 1.65
LYSMD4-202ENST00000344791 PDE3BQ13370 1112 aa25.34■■□□□ 1.65
LYSMD4-202ENST00000344791 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
LYSMD4-202ENST00000344791 ABCC1P33527 1531 aa25.34■■□□□ 1.65
LYSMD4-202ENST00000344791 PPP2R1AP30153 589 aa25.33■■□□□ 1.64
LYSMD4-202ENST00000344791 CHGAP10645 457 aaKnown RBP25.32■■□□□ 1.64
LYSMD4-202ENST00000344791 CCDC146Q8IYE0 955 aa25.32■■□□□ 1.64
LYSMD4-202ENST00000344791 CFAP70Q5T0N1 1121 aa25.32■■□□□ 1.64
LYSMD4-202ENST00000344791 EIF2AK4Q9P2K8 1649 aaKnown RBP25.32■■□□□ 1.64
LYSMD4-202ENST00000344791 WASHC2CQ9Y4E1 1318 aa25.31■■□□□ 1.64
LYSMD4-202ENST00000344791 CRBNQ96SW2 442 aa25.31■■□□□ 1.64
LYSMD4-202ENST00000344791 C20orf194Q5TEA3 1177 aa25.3■■□□□ 1.64
LYSMD4-202ENST00000344791 SCAPERQ9BY12 1400 aa25.3■■□□□ 1.64
LYSMD4-202ENST00000344791 ATP10AO60312 1499 aa25.3■■□□□ 1.64
LYSMD4-202ENST00000344791 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
LYSMD4-202ENST00000344791 AMER1Q5JTC6 1135 aaPredicted RBP25.27■■□□□ 1.64
LYSMD4-202ENST00000344791 WDR7Q9Y4E6 1490 aa25.27■■□□□ 1.64
LYSMD4-202ENST00000344791 BLMP54132 1417 aaPredicted RBP25.24■■□□□ 1.63
LYSMD4-202ENST00000344791 UGGT1Q9NYU2 1555 aa25.23■■□□□ 1.63
LYSMD4-202ENST00000344791 IPO9Q96P70 1041 aaKnown RBP25.23■■□□□ 1.63
LYSMD4-202ENST00000344791 ADGRF5Q8IZF2 1346 aa25.23■■□□□ 1.63
LYSMD4-202ENST00000344791 KANK1Q14678 1352 aa25.23■■□□□ 1.63
LYSMD4-202ENST00000344791 ZBTB47Q9UFB7 747 aaPredicted RBP25.23■■□□□ 1.63
LYSMD4-202ENST00000344791 PLEKHH1Q9ULM0 1364 aa25.22■■□□□ 1.63
LYSMD4-202ENST00000344791 LAMC1P11047 1609 aa25.22■■□□□ 1.63
LYSMD4-202ENST00000344791 FANCAO15360 1455 aa25.22■■□□□ 1.63
LYSMD4-202ENST00000344791 ZFYVE16Q7Z3T8 1539 aa25.22■■□□□ 1.63
LYSMD4-202ENST00000344791 MADDQ8WXG6 1647 aa25.21■■□□□ 1.63
LYSMD4-202ENST00000344791 CDCA8Q53HL2 280 aa25.21■■□□□ 1.63
LYSMD4-202ENST00000344791 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms