RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 IFT140Q96RY7 1462 aa16.84■□□□□ 0.29
TCF3-202ENST00000344749 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
TCF3-202ENST00000344749 BCL2L13Q9BXK5 485 aa16.83■□□□□ 0.28
TCF3-202ENST00000344749 APAF1O14727 1248 aa16.83■□□□□ 0.28
TCF3-202ENST00000344749 DAPK1P53355 1430 aa16.82■□□□□ 0.28
TCF3-202ENST00000344749 PDE3BQ13370 1112 aa16.82■□□□□ 0.28
TCF3-202ENST00000344749 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
TCF3-202ENST00000344749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.286e-10■■■■■ 33.2
TCF3-202ENST00000344749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.28
TCF3-202ENST00000344749 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
TCF3-202ENST00000344749 RRP1P56182 461 aaKnown RBP16.8■□□□□ 0.28
TCF3-202ENST00000344749 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
TCF3-202ENST00000344749 C9orf84Q5VXU9 1444 aa16.8■□□□□ 0.28
TCF3-202ENST00000344749 TMEM132EQ6IEE7 984 aa16.79■□□□□ 0.28
TCF3-202ENST00000344749 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
TCF3-202ENST00000344749 SPRYD3Q8NCJ5 442 aa16.79■□□□□ 0.28
TCF3-202ENST00000344749 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
TCF3-202ENST00000344749 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
TCF3-202ENST00000344749 KIAA0586Q9BVV6 1533 aa16.78■□□□□ 0.28
TCF3-202ENST00000344749 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
TCF3-202ENST00000344749 KIAA1107Q9UPP5 1409 aa16.77■□□□□ 0.28
TCF3-202ENST00000344749 CRBNQ96SW2 442 aa16.77■□□□□ 0.28
TCF3-202ENST00000344749 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
TCF3-202ENST00000344749 SYNJ2O15056 1496 aa16.77■□□□□ 0.28
TCF3-202ENST00000344749 PTPRKQ15262 1439 aa16.77■□□□□ 0.27
TCF3-202ENST00000344749 A0A0G2JS52 829 aa16.76■□□□□ 0.27
TCF3-202ENST00000344749 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
TCF3-202ENST00000344749 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
TCF3-202ENST00000344749 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
TCF3-202ENST00000344749 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
TCF3-202ENST00000344749 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
TCF3-202ENST00000344749 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
TCF3-202ENST00000344749 APBB1O00213 710 aa16.75■□□□□ 0.27
TCF3-202ENST00000344749 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
TCF3-202ENST00000344749 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
TCF3-202ENST00000344749 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
TCF3-202ENST00000344749 CENPJQ9HC77 1338 aaPredicted RBP16.73■□□□□ 0.27
TCF3-202ENST00000344749 MAP3K1Q13233 1512 aa16.73■□□□□ 0.27
TCF3-202ENST00000344749 SMC4Q9NTJ3 1288 aa16.73■□□□□ 0.27
TCF3-202ENST00000344749 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
TCF3-202ENST00000344749 ABCC5O15440 1437 aa16.73■□□□□ 0.27
TCF3-202ENST00000344749 PNNQ9H307 717 aaKnown RBP16.73■□□□□ 0.27
TCF3-202ENST00000344749 ANP32BQ92688 251 aaKnown RBP16.72■□□□□ 0.27
TCF3-202ENST00000344749 MS4A1P11836 297 aa16.72■□□□□ 0.27
TCF3-202ENST00000344749 ANKRD30BQ9BXX2 1392 aa16.72■□□□□ 0.27
TCF3-202ENST00000344749 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
TCF3-202ENST00000344749 DEKP35659 375 aaKnown RBP16.71■□□□□ 0.27
TCF3-202ENST00000344749 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
TCF3-202ENST00000344749 VGFO15240 615 aaPredicted RBP16.71■□□□□ 0.27
TCF3-202ENST00000344749 HDGFP51858 240 aaKnown RBP16.71■□□□□ 0.27
TCF3-202ENST00000344749 COG6Q9Y2V7 657 aa16.7■□□□□ 0.26
TCF3-202ENST00000344749 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
TCF3-202ENST00000344749 IPO9Q96P70 1041 aaKnown RBP16.7■□□□□ 0.26
TCF3-202ENST00000344749 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
TCF3-202ENST00000344749 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
TCF3-202ENST00000344749 SLKQ9H2G2 1235 aaPredicted RBP16.69■□□□□ 0.26
TCF3-202ENST00000344749 CUL7Q14999 1698 aa16.69■□□□□ 0.26
TCF3-202ENST00000344749 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
TCF3-202ENST00000344749 SLC4A3P48751 1232 aa16.68■□□□□ 0.26
TCF3-202ENST00000344749 PDE4AP27815 886 aa16.68■□□□□ 0.26
TCF3-202ENST00000344749 AKNAQ7Z591 1439 aa16.68■□□□□ 0.26
TCF3-202ENST00000344749 MAPKBP1O60336 1514 aa16.67■□□□□ 0.26
TCF3-202ENST00000344749 CGNL1Q0VF96 1302 aa16.66■□□□□ 0.26
TCF3-202ENST00000344749 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
TCF3-202ENST00000344749 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
TCF3-202ENST00000344749 PRKCSHP14314 528 aaPredicted RBP16.65■□□□□ 0.26
TCF3-202ENST00000344749 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
TCF3-202ENST00000344749 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
TCF3-202ENST00000344749 ROCK1Q13464 1354 aa16.65■□□□□ 0.26
TCF3-202ENST00000344749 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
TCF3-202ENST00000344749 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.25
TCF3-202ENST00000344749 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
TCF3-202ENST00000344749 GGNBP2Q9H3C7 697 aa16.64■□□□□ 0.25
TCF3-202ENST00000344749 NCOA1Q15788 1441 aa16.63■□□□□ 0.25
TCF3-202ENST00000344749 BRD4O60885 1362 aaPredicted RBP16.63■□□□□ 0.25
TCF3-202ENST00000344749 E9PSI1 815 aa16.63■□□□□ 0.25
TCF3-202ENST00000344749 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
TCF3-202ENST00000344749 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
TCF3-202ENST00000344749 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
TCF3-202ENST00000344749 RTF1Q92541 710 aaKnown RBP16.62■□□□□ 0.25
TCF3-202ENST00000344749 CAMSAP2Q08AD1 1489 aa16.62■□□□□ 0.25
TCF3-202ENST00000344749 FAM69CQ0P6D2 419 aa16.62■□□□□ 0.25
TCF3-202ENST00000344749 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
TCF3-202ENST00000344749 GLIPR1L2Q4G1C9 344 aa16.61■□□□□ 0.25
TCF3-202ENST00000344749 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
TCF3-202ENST00000344749 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
TCF3-202ENST00000344749 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
TCF3-202ENST00000344749 LTV1Q96GA3 475 aaPredicted RBP16.6■□□□□ 0.25
TCF3-202ENST00000344749 MFAP1P55081 439 aaKnown RBP16.59■□□□□ 0.25
TCF3-202ENST00000344749 MTHFSP49914 203 aa16.59■□□□□ 0.25
TCF3-202ENST00000344749 CHMP4BQ9H444 224 aaKnown RBP16.59■□□□□ 0.25
TCF3-202ENST00000344749 NGDNQ8NEJ9 315 aaKnown RBP16.58■□□□□ 0.25
TCF3-202ENST00000344749 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
TCF3-202ENST00000344749 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
TCF3-202ENST00000344749 PMFBP1Q8TBY8 1022 aa16.57■□□□□ 0.24
TCF3-202ENST00000344749 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
TCF3-202ENST00000344749 PANK1Q8TE04 598 aa16.56■□□□□ 0.24
TCF3-202ENST00000344749 GOLGA6L22H0YM25 854 aa16.56■□□□□ 0.24
TCF3-202ENST00000344749 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
TCF3-202ENST00000344749 SLC4A10Q6U841 1118 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms