RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
SP140-201ENST00000343805 WASHC2AQ641Q2 1341 aa11.74□□□□□ -0.53
SP140-201ENST00000343805 CCDC184Q52MB2 194 aa11.73□□□□□ -0.53
SP140-201ENST00000343805 CDK13Q14004 1512 aaKnown RBP11.73□□□□□ -0.53
SP140-201ENST00000343805 GRIN2BQ13224 1484 aa11.73□□□□□ -0.53
SP140-201ENST00000343805 MAGI3Q5TCQ9 1506 aa11.73□□□□□ -0.53
SP140-201ENST00000343805 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.53
SP140-201ENST00000343805 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
SP140-201ENST00000343805 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
SP140-201ENST00000343805 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
SP140-201ENST00000343805 LRRIQ1Q96JM4 1722 aa11.72□□□□□ -0.53
SP140-201ENST00000343805 WASHC2CQ9Y4E1 1318 aa11.72□□□□□ -0.53
SP140-201ENST00000343805 THOC2Q8NI27 1593 aaKnown RBP11.72□□□□□ -0.53
SP140-201ENST00000343805 CCDC9Q9Y3X0 531 aaKnown RBP11.71□□□□□ -0.54
SP140-201ENST00000343805 CCDC82Q8N4S0 544 aa11.7□□□□□ -0.54
SP140-201ENST00000343805 SUPT6HQ7KZ85 1726 aaKnown RBP11.69□□□□□ -0.54
SP140-201ENST00000343805 ZNF608Q9ULD9 1512 aaPredicted RBP11.69□□□□□ -0.54
SP140-201ENST00000343805 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
SP140-201ENST00000343805 RRP9O43818 475 aaKnown RBP11.68□□□□□ -0.54
SP140-201ENST00000343805 SAMD9Q5K651 1589 aa11.68□□□□□ -0.54
SP140-201ENST00000343805 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
SP140-201ENST00000343805 KDM6BO15054 1643 aa11.67□□□□□ -0.54
SP140-201ENST00000343805 EHBP1L1Q8N3D4 1523 aa11.67□□□□□ -0.54
SP140-201ENST00000343805 EPRSP07814 1512 aaKnown RBP11.67□□□□□ -0.54
SP140-201ENST00000343805 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
SP140-201ENST00000343805 UGGT2Q9NYU1 1516 aa11.66□□□□□ -0.54
SP140-201ENST00000343805 KCTD17Q8N5Z5 321 aa11.66□□□□□ -0.54
SP140-201ENST00000343805 WDR62O43379 1518 aa11.65□□□□□ -0.54
SP140-201ENST00000343805 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
SP140-201ENST00000343805 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
SP140-201ENST00000343805 CLUAP1Q96AJ1 413 aa11.64□□□□□ -0.55
SP140-201ENST00000343805 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
SP140-201ENST00000343805 CFDP1Q9UEE9 299 aaPredicted RBP11.64□□□□□ -0.55
SP140-201ENST00000343805 ZBTB7CA1YPR0 619 aa11.64□□□□□ -0.55
SP140-201ENST00000343805 NAP1L2Q9ULW6 460 aaPredicted RBP11.64□□□□□ -0.55
SP140-201ENST00000343805 MTMR7Q9Y216 660 aa11.64□□□□□ -0.55
SP140-201ENST00000343805 CHMP7Q8WUX9 453 aaPredicted RBP11.63□□□□□ -0.55
SP140-201ENST00000343805 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
SP140-201ENST00000343805 DHX37Q8IY37 1157 aaKnown RBP11.63□□□□□ -0.55
SP140-201ENST00000343805 RAD21O60216 631 aa11.62□□□□□ -0.55
SP140-201ENST00000343805 AEBP1Q8IUX7 1158 aa11.62□□□□□ -0.55
SP140-201ENST00000343805 CDK11AQ9UQ88 783 aaPredicted RBP11.62□□□□□ -0.55
SP140-201ENST00000343805 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
SP140-201ENST00000343805 PRKRIP1Q9H875 184 aaPredicted RBP11.61□□□□□ -0.55
SP140-201ENST00000343805 TARBP1Q13395 1621 aaKnown RBP11.61□□□□□ -0.55
SP140-201ENST00000343805 FAM43AQ8N2R8 423 aa11.6□□□□□ -0.55
SP140-201ENST00000343805 IPO4Q8TEX9 1081 aaKnown RBP11.6□□□□□ -0.55
SP140-201ENST00000343805 KDM5BQ9UGL1 1544 aa11.6□□□□□ -0.55
SP140-201ENST00000343805 STK24Q9Y6E0 443 aa11.6□□□□□ -0.55
SP140-201ENST00000343805 HECW1Q76N89 1606 aa11.59□□□□□ -0.55
SP140-201ENST00000343805 PRG4Q92954 1404 aaPredicted RBP11.59□□□□□ -0.55
SP140-201ENST00000343805 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
SP140-201ENST00000343805 PRDM4Q9UKN5 801 aa11.58□□□□□ -0.56
SP140-201ENST00000343805 CCDC7Q96M83 1385 aa11.58□□□□□ -0.56
SP140-201ENST00000343805 KIF7Q2M1P5 1343 aa11.57□□□□□ -0.56
SP140-201ENST00000343805 ABCC5O15440 1437 aa11.57□□□□□ -0.56
SP140-201ENST00000343805 DAPK1P53355 1430 aa11.57□□□□□ -0.56
SP140-201ENST00000343805 ZMYND10O75800 440 aa11.57□□□□□ -0.56
SP140-201ENST00000343805 HSP90AA2PQ14568 343 aaPredicted RBP11.57□□□□□ -0.56
SP140-201ENST00000343805 B4GALNT3Q6L9W6 998 aa11.57□□□□□ -0.56
SP140-201ENST00000343805 ARHGEF11O15085 1522 aa11.56□□□□□ -0.56
SP140-201ENST00000343805 ANKRD30BQ9BXX2 1392 aa11.56□□□□□ -0.56
SP140-201ENST00000343805 KDM4CQ9H3R0 1056 aa11.56□□□□□ -0.56
SP140-201ENST00000343805 BCCIPQ9P287 314 aaKnown RBP eCLIP11.56□□□□□ -0.56
SP140-201ENST00000343805 TCOF1Q13428 1488 aaKnown RBP11.56□□□□□ -0.56
SP140-201ENST00000343805 MIA2Q96PC5 1412 aa11.56□□□□□ -0.56
SP140-201ENST00000343805 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
SP140-201ENST00000343805 FAM117AQ9C073 453 aa11.56□□□□□ -0.56
SP140-201ENST00000343805 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
SP140-201ENST00000343805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
SP140-201ENST00000343805 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
SP140-201ENST00000343805 CENPJQ9HC77 1338 aaPredicted RBP11.55□□□□□ -0.56
SP140-201ENST00000343805 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
SP140-201ENST00000343805 CNTLNQ9NXG0 1405 aa11.54□□□□□ -0.56
SP140-201ENST00000343805 ABCB7O75027 752 aa11.54□□□□□ -0.56
SP140-201ENST00000343805 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
SP140-201ENST00000343805 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
SP140-201ENST00000343805 PLB1Q6P1J6 1458 aa11.53□□□□□ -0.56
SP140-201ENST00000343805 ADAMTS12P58397 1594 aa11.53□□□□□ -0.56
SP140-201ENST00000343805 NUP153P49790 1475 aaKnown RBP11.53□□□□□ -0.56
SP140-201ENST00000343805 CHRM1P11229 460 aaPredicted RBP11.53□□□□□ -0.56
SP140-201ENST00000343805 JPH4Q96JJ6 628 aa11.53□□□□□ -0.56
SP140-201ENST00000343805 IFT140Q96RY7 1462 aa11.52□□□□□ -0.56
SP140-201ENST00000343805 HNRNPMP52272 730 aaKnown RBP eCLIP11.52□□□□□ -0.57
SP140-201ENST00000343805 DISP1Q96F81 1524 aa11.51□□□□□ -0.57
SP140-201ENST00000343805 PLEKHD1A6NEE1 506 aa11.51□□□□□ -0.57
SP140-201ENST00000343805 GTF2E1P29083 439 aaPredicted RBP11.51□□□□□ -0.57
SP140-201ENST00000343805 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
SP140-201ENST00000343805 WDR70Q9NW82 654 aa11.5□□□□□ -0.57
SP140-201ENST00000343805 NCOA1Q15788 1441 aa11.5□□□□□ -0.57
SP140-201ENST00000343805 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
SP140-201ENST00000343805 RPRD2Q5VT52 1461 aaKnown RBP11.5□□□□□ -0.57
SP140-201ENST00000343805 CARD11Q9BXL7 1154 aa11.49□□□□□ -0.57
SP140-201ENST00000343805 KIAA0586Q9BVV6 1533 aa11.49□□□□□ -0.57
SP140-201ENST00000343805 NUP155O75694 1391 aa11.49□□□□□ -0.57
SP140-201ENST00000343805 DCAF11Q8TEB1 546 aa11.49□□□□□ -0.57
SP140-201ENST00000343805 RBM26Q5T8P6 1007 aaKnown RBP11.49□□□□□ -0.57
SP140-201ENST00000343805 TSPY4P0CV99 314 aa11.48□□□□□ -0.57
SP140-201ENST00000343805 TSPY10P0CW01 314 aa11.48□□□□□ -0.57
SP140-201ENST00000343805 TEX2Q8IWB9 1127 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms