RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 RGL3Q3MIN7 710 aa26.93■■□□□ 1.9
CNTNAP3B-202ENST00000341990 SAMD9LQ8IVG5 1584 aa26.93■■□□□ 1.9
CNTNAP3B-202ENST00000341990 ARHGEF5Q12774 1597 aa26.92■■□□□ 1.9
CNTNAP3B-202ENST00000341990 MYBBP1AQ9BQG0 1328 aaKnown RBP26.91■■□□□ 1.9
CNTNAP3B-202ENST00000341990 CCDC136Q96JN2 1154 aa26.91■■□□□ 1.9
CNTNAP3B-202ENST00000341990 CCDC141Q6ZP82 1450 aa26.91■■□□□ 1.9
CNTNAP3B-202ENST00000341990 LRPPRCP42704 1394 aaKnown RBP26.91■■□□□ 1.9
CNTNAP3B-202ENST00000341990 NBPF1Q3BBV0 1214 aa26.9■■□□□ 1.9
CNTNAP3B-202ENST00000341990 CDC42BPBQ9Y5S2 1711 aa26.89■■□□□ 1.9
CNTNAP3B-202ENST00000341990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.88■■□□□ 1.89
CNTNAP3B-202ENST00000341990 BRD4O60885 1362 aaPredicted RBP26.88■■□□□ 1.89
CNTNAP3B-202ENST00000341990 SALL2Q9Y467 1007 aaPredicted RBP26.87■■□□□ 1.89
CNTNAP3B-202ENST00000341990 E9PCH4 1651 aa26.86■■□□□ 1.89
CNTNAP3B-202ENST00000341990 CCDC144AA2RUR9 1427 aa26.86■■□□□ 1.89
CNTNAP3B-202ENST00000341990 PRAG1Q86YV5 1406 aa26.86■■□□□ 1.89
CNTNAP3B-202ENST00000341990 RALBP1Q15311 655 aa26.86■■□□□ 1.89
CNTNAP3B-202ENST00000341990 PREX2Q70Z35 1606 aa26.83■■□□□ 1.89
CNTNAP3B-202ENST00000341990 SYCP2Q9BX26 1530 aa26.83■■□□□ 1.89
CNTNAP3B-202ENST00000341990 PLA2R1Q13018 1463 aa26.83■■□□□ 1.88
CNTNAP3B-202ENST00000341990 TRPM1Q7Z4N2 1603 aa26.81■■□□□ 1.88
CNTNAP3B-202ENST00000341990 KTN1Q86UP2 1357 aaKnown RBP26.79■■□□□ 1.88
CNTNAP3B-202ENST00000341990 BCL11AQ9H165 835 aa26.77■■□□□ 1.88
CNTNAP3B-202ENST00000341990 A2MP01023 1474 aa26.77■■□□□ 1.88
CNTNAP3B-202ENST00000341990 TTC37Q6PGP7 1564 aa26.77■■□□□ 1.88
CNTNAP3B-202ENST00000341990 PARD3Q8TEW0 1356 aa26.77■■□□□ 1.88
CNTNAP3B-202ENST00000341990 PER1O15534 1290 aaPredicted RBP26.76■■□□□ 1.87
CNTNAP3B-202ENST00000341990 NLRP13Q86W25 1043 aa26.76■■□□□ 1.87
CNTNAP3B-202ENST00000341990 ARHGAP5Q13017 1502 aa26.76■■□□□ 1.87
CNTNAP3B-202ENST00000341990 RSPH4AQ5TD94 716 aa26.75■■□□□ 1.87
CNTNAP3B-202ENST00000341990 DISP3Q9P2K9 1392 aa26.74■■□□□ 1.87
CNTNAP3B-202ENST00000341990 CC2D1BQ5T0F9 858 aaKnown RBP26.73■■□□□ 1.87
CNTNAP3B-202ENST00000341990 RRP1P56182 461 aaKnown RBP26.73■■□□□ 1.87
CNTNAP3B-202ENST00000341990 PLEKHH2Q8IVE3 1493 aa26.73■■□□□ 1.87
CNTNAP3B-202ENST00000341990 PAK3O75914 559 aaPredicted RBP26.72■■□□□ 1.87
CNTNAP3B-202ENST00000341990 TESK2Q96S53 571 aa26.72■■□□□ 1.87
CNTNAP3B-202ENST00000341990 EXOC6Q8TAG9 804 aa26.71■■□□□ 1.87
CNTNAP3B-202ENST00000341990 UNC13BO14795 1591 aa26.7■■□□□ 1.87
CNTNAP3B-202ENST00000341990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.7■■□□□ 1.87
CNTNAP3B-202ENST00000341990 GPRASP1Q5JY77 1395 aa26.7■■□□□ 1.86
CNTNAP3B-202ENST00000341990 RCAN3Q9UKA8 241 aa26.7■■□□□ 1.86
CNTNAP3B-202ENST00000341990 CDCA7LQ96GN5 454 aa26.69■■□□□ 1.86
CNTNAP3B-202ENST00000341990 NOP58Q9Y2X3 529 aaKnown RBP26.69■■□□□ 1.86
CNTNAP3B-202ENST00000341990 COL17A1Q9UMD9 1497 aaPredicted RBP26.68■■□□□ 1.86
CNTNAP3B-202ENST00000341990 PANK3Q9H999 370 aa26.66■■□□□ 1.86
CNTNAP3B-202ENST00000341990 PRDM15P57071 1507 aaPredicted RBP26.65■■□□□ 1.86
CNTNAP3B-202ENST00000341990 MAST1Q9Y2H9 1570 aa26.65■■□□□ 1.86
CNTNAP3B-202ENST00000341990 MYO5CQ9NQX4 1742 aa26.64■■□□□ 1.85
CNTNAP3B-202ENST00000341990 ERBINQ96RT1 1412 aa26.62■■□□□ 1.85
CNTNAP3B-202ENST00000341990 IQGAP3Q86VI3 1631 aa26.62■■□□□ 1.85
CNTNAP3B-202ENST00000341990 ERCC6L2Q5T890 1561 aa26.62■■□□□ 1.85
CNTNAP3B-202ENST00000341990 CHD1O14646 1710 aa26.61■■□□□ 1.85
CNTNAP3B-202ENST00000341990 PLXNC1O60486 1568 aa26.59■■□□□ 1.85
CNTNAP3B-202ENST00000341990 NBR1Q14596 966 aa26.58■■□□□ 1.85
CNTNAP3B-202ENST00000341990 PLIN1O60240 522 aa26.57■■□□□ 1.84
CNTNAP3B-202ENST00000341990 ANP32AP39687 249 aaKnown RBP26.57■■□□□ 1.84
CNTNAP3B-202ENST00000341990 LAMC1P11047 1609 aa26.56■■□□□ 1.84
CNTNAP3B-202ENST00000341990 TMF1P82094 1093 aa26.56■■□□□ 1.84
CNTNAP3B-202ENST00000341990 PDE3BQ13370 1112 aa26.56■■□□□ 1.84
CNTNAP3B-202ENST00000341990 DUOX2Q9NRD8 1548 aa26.54■■□□□ 1.84
CNTNAP3B-202ENST00000341990 IPO9Q96P70 1041 aaKnown RBP26.54■■□□□ 1.84
CNTNAP3B-202ENST00000341990 WASHC2CQ9Y4E1 1318 aa26.53■■□□□ 1.84
CNTNAP3B-202ENST00000341990 EIF2AK4Q9P2K8 1649 aaKnown RBP26.52■■□□□ 1.84
CNTNAP3B-202ENST00000341990 ABCC2Q92887 1545 aa26.52■■□□□ 1.84
CNTNAP3B-202ENST00000341990 BLMP54132 1417 aaPredicted RBP26.52■■□□□ 1.84
CNTNAP3B-202ENST00000341990 MAGI2Q86UL8 1455 aa26.52■■□□□ 1.84
CNTNAP3B-202ENST00000341990 ATP10AO60312 1499 aa26.51■■□□□ 1.83
CNTNAP3B-202ENST00000341990 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
CNTNAP3B-202ENST00000341990 TRAPPC8Q9Y2L5 1435 aa26.48■■□□□ 1.83
CNTNAP3B-202ENST00000341990 NPM2Q86SE8 214 aaKnown RBP26.47■■□□□ 1.83
CNTNAP3B-202ENST00000341990 ADAMTS8Q9UP79 889 aa26.47■■□□□ 1.83
CNTNAP3B-202ENST00000341990 SKAP1Q86WV1 359 aa26.46■■□□□ 1.83
CNTNAP3B-202ENST00000341990 PLCH2O75038 1416 aa26.45■■□□□ 1.83
CNTNAP3B-202ENST00000341990 DEKP35659 375 aaKnown RBP26.45■■□□□ 1.82
CNTNAP3B-202ENST00000341990 RNF17Q9BXT8 1623 aaKnown RBP26.45■■□□□ 1.82
CNTNAP3B-202ENST00000341990 EFCAB2Q5VUJ9 269 aa26.44■■□□□ 1.82
CNTNAP3B-202ENST00000341990 ZBTB47Q9UFB7 747 aaPredicted RBP26.44■■□□□ 1.82
CNTNAP3B-202ENST00000341990 WDR7Q9Y4E6 1490 aa26.44■■□□□ 1.82
CNTNAP3B-202ENST00000341990 CRBNQ96SW2 442 aa26.42■■□□□ 1.82
CNTNAP3B-202ENST00000341990 TCERG1O14776 1098 aaKnown RBP26.42■■□□□ 1.82
CNTNAP3B-202ENST00000341990 AFAP1Q8N556 730 aa26.42■■□□□ 1.82
CNTNAP3B-202ENST00000341990 PDE4AP27815 886 aa26.41■■□□□ 1.82
CNTNAP3B-202ENST00000341990 C20orf194Q5TEA3 1177 aa26.4■■□□□ 1.82
CNTNAP3B-202ENST00000341990 ABCC1P33527 1531 aa26.39■■□□□ 1.82
CNTNAP3B-202ENST00000341990 MADDQ8WXG6 1647 aa26.39■■□□□ 1.82
CNTNAP3B-202ENST00000341990 KNSTRNQ9Y448 316 aa26.39■■□□□ 1.82
CNTNAP3B-202ENST00000341990 ZMYM4Q5VZL5 1548 aa26.39■■□□□ 1.81
CNTNAP3B-202ENST00000341990 PPP2R1AP30153 589 aa26.39■■□□□ 1.81
CNTNAP3B-202ENST00000341990 INSRP06213 1382 aa26.39■■□□□ 1.81
CNTNAP3B-202ENST00000341990 MYT1LQ9UL68 1186 aa26.38■■□□□ 1.81
CNTNAP3B-202ENST00000341990 ZCCHC11Q5TAX3 1644 aaKnown RBP26.37■■□□□ 1.81
CNTNAP3B-202ENST00000341990 AMER1Q5JTC6 1135 aaPredicted RBP26.37■■□□□ 1.81
CNTNAP3B-202ENST00000341990 PLEKHH1Q9ULM0 1364 aa26.36■■□□□ 1.81
CNTNAP3B-202ENST00000341990 SPAG9O60271 1321 aaKnown RBP26.36■■□□□ 1.81
CNTNAP3B-202ENST00000341990 BACH2Q9BYV9 841 aa26.35■■□□□ 1.81
CNTNAP3B-202ENST00000341990 IQGAP1P46940 1657 aa26.34■■□□□ 1.81
CNTNAP3B-202ENST00000341990 WDR43Q15061 677 aaKnown RBP eCLIP26.32■■□□□ 1.8
CNTNAP3B-202ENST00000341990 TRPM2O94759 1503 aa26.3■■□□□ 1.8
CNTNAP3B-202ENST00000341990 CLTCL1P53675 1640 aa26.29■■□□□ 1.8
CNTNAP3B-202ENST00000341990 DUSP27Q5VZP5 1158 aa26.29■■□□□ 1.8
CNTNAP3B-202ENST00000341990 SCAF11Q99590 1463 aaKnown RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms