RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
DNMT1-201ENST00000340748 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
DNMT1-201ENST00000340748 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
DNMT1-201ENST00000340748 CCDC144AA2RUR9 1427 aa16.4■□□□□ 0.22
DNMT1-201ENST00000340748 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
DNMT1-201ENST00000340748 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
DNMT1-201ENST00000340748 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
DNMT1-201ENST00000340748 GRIN2AQ12879 1464 aa16.37■□□□□ 0.21
DNMT1-201ENST00000340748 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
DNMT1-201ENST00000340748 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
DNMT1-201ENST00000340748 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
DNMT1-201ENST00000340748 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
DNMT1-201ENST00000340748 HSP90AB1P08238 724 aaKnown RBP16.36■□□□□ 0.21
DNMT1-201ENST00000340748 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
DNMT1-201ENST00000340748 L3MBTL2Q969R5 705 aa16.35■□□□□ 0.21
DNMT1-201ENST00000340748 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
DNMT1-201ENST00000340748 ESCO1Q5FWF5 840 aa16.34■□□□□ 0.21
DNMT1-201ENST00000340748 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
DNMT1-201ENST00000340748 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.21
DNMT1-201ENST00000340748 CDK11BP21127 795 aaKnown RBP16.33■□□□□ 0.21
DNMT1-201ENST00000340748 RCAN3Q9UKA8 241 aa16.33■□□□□ 0.21
DNMT1-201ENST00000340748 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.2
DNMT1-201ENST00000340748 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
DNMT1-201ENST00000340748 DHX57Q6P158 1386 aaKnown RBP16.32■□□□□ 0.2
DNMT1-201ENST00000340748 G3V3G9 751 aa16.32■□□□□ 0.2
DNMT1-201ENST00000340748 DCAF8Q5TAQ9 597 aa16.32■□□□□ 0.2
DNMT1-201ENST00000340748 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
DNMT1-201ENST00000340748 HSCBQ8IWL3 235 aa16.32■□□□□ 0.2
DNMT1-201ENST00000340748 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-201ENST00000340748 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
DNMT1-201ENST00000340748 COG3Q96JB2 828 aa16.28■□□□□ 0.2
DNMT1-201ENST00000340748 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
DNMT1-201ENST00000340748 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
DNMT1-201ENST00000340748 MCCP23508 829 aa16.28■□□□□ 0.2
DNMT1-201ENST00000340748 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
DNMT1-201ENST00000340748 SLC26A8Q96RN1 970 aa16.27■□□□□ 0.2
DNMT1-201ENST00000340748 PDE3BQ13370 1112 aa16.27■□□□□ 0.19
DNMT1-201ENST00000340748 RBM19Q9Y4C8 960 aaKnown RBP16.27■□□□□ 0.19
DNMT1-201ENST00000340748 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
DNMT1-201ENST00000340748 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.197e-7■□□□□ 10.4
DNMT1-201ENST00000340748 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
DNMT1-201ENST00000340748 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
DNMT1-201ENST00000340748 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
DNMT1-201ENST00000340748 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
DNMT1-201ENST00000340748 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
DNMT1-201ENST00000340748 AKNAQ7Z591 1439 aa16.25■□□□□ 0.19
DNMT1-201ENST00000340748 PLB1Q6P1J6 1458 aa16.25■□□□□ 0.19
DNMT1-201ENST00000340748 KCNJ4P48050 445 aa16.25■□□□□ 0.19
DNMT1-201ENST00000340748 UBAP1LF5GYI3 381 aa16.24■□□□□ 0.19
DNMT1-201ENST00000340748 C1orf141Q5JVX7 400 aa16.24■□□□□ 0.19
DNMT1-201ENST00000340748 NUTM2GQ5VZR2 741 aa16.24■□□□□ 0.19
DNMT1-201ENST00000340748 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
DNMT1-201ENST00000340748 TEX14Q8IWB6 1497 aa16.23■□□□□ 0.19
DNMT1-201ENST00000340748 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
DNMT1-201ENST00000340748 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
DNMT1-201ENST00000340748 FGD1P98174 961 aa16.23■□□□□ 0.19
DNMT1-201ENST00000340748 STRN4Q9NRL3 753 aa16.23■□□□□ 0.19
DNMT1-201ENST00000340748 PMFBP1Q8TBY8 1022 aa16.22■□□□□ 0.19
DNMT1-201ENST00000340748 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
DNMT1-201ENST00000340748 TROQ12816 1431 aaPredicted RBP16.21■□□□□ 0.19
DNMT1-201ENST00000340748 DNTTIP2Q5QJE6 756 aaKnown RBP16.2■□□□□ 0.18
DNMT1-201ENST00000340748 NLRP2Q9NX02 1062 aa16.2■□□□□ 0.18
DNMT1-201ENST00000340748 PPP1R1BQ9UD71 204 aaPredicted RBP16.2■□□□□ 0.18
DNMT1-201ENST00000340748 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
DNMT1-201ENST00000340748 L1TD1Q5T7N2 865 aaKnown RBP16.19■□□□□ 0.18
DNMT1-201ENST00000340748 DENND4BO75064 1496 aaPredicted RBP16.19■□□□□ 0.18
DNMT1-201ENST00000340748 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
DNMT1-201ENST00000340748 ADGRL1O94910 1474 aa16.19■□□□□ 0.18
DNMT1-201ENST00000340748 SLC52A1Q9NWF4 448 aa16.19■□□□□ 0.18
DNMT1-201ENST00000340748 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
DNMT1-201ENST00000340748 ITPRIPQ8IWB1 547 aa16.18■□□□□ 0.18
DNMT1-201ENST00000340748 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
DNMT1-201ENST00000340748 TOM1O60784 492 aa16.17■□□□□ 0.18
DNMT1-201ENST00000340748 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
DNMT1-201ENST00000340748 PTMSP20962 102 aa16.17■□□□□ 0.18
DNMT1-201ENST00000340748 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
DNMT1-201ENST00000340748 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
DNMT1-201ENST00000340748 TMEM132EQ6IEE7 984 aa16.16■□□□□ 0.18
DNMT1-201ENST00000340748 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
DNMT1-201ENST00000340748 EFCAB5A4FU69 1503 aa16.15■□□□□ 0.18
DNMT1-201ENST00000340748 RAPGEF4Q8WZA2 1011 aa16.15■□□□□ 0.18
DNMT1-201ENST00000340748 HECW1Q76N89 1606 aa16.14■□□□□ 0.18
DNMT1-201ENST00000340748 NLRP6P59044 892 aa16.14■□□□□ 0.17
DNMT1-201ENST00000340748 TTC5Q8N0Z6 440 aa16.14■□□□□ 0.17
DNMT1-201ENST00000340748 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
DNMT1-201ENST00000340748 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
DNMT1-201ENST00000340748 ABTB2Q8N961 1025 aa16.14■□□□□ 0.17
DNMT1-201ENST00000340748 LMOD3Q0VAK6 560 aa16.14■□□□□ 0.17
DNMT1-201ENST00000340748 ASXL2Q76L83 1435 aa16.14■□□□□ 0.17
DNMT1-201ENST00000340748 TAF7LQ5H9L4 462 aa16.13■□□□□ 0.17
DNMT1-201ENST00000340748 CENPJQ9HC77 1338 aaPredicted RBP16.13■□□□□ 0.17
DNMT1-201ENST00000340748 CHMP3Q9Y3E7 222 aa16.13■□□□□ 0.17
DNMT1-201ENST00000340748 ST20-MTHFSA0A0A6YYL1 179 aa16.12■□□□□ 0.17
DNMT1-201ENST00000340748 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
DNMT1-201ENST00000340748 NRDCO43847 1150 aa16.12■□□□□ 0.17
DNMT1-201ENST00000340748 HSPA2P54652 639 aa16.12■□□□□ 0.17
DNMT1-201ENST00000340748 NAP1L2Q9ULW6 460 aaPredicted RBP16.12■□□□□ 0.17
DNMT1-201ENST00000340748 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
DNMT1-201ENST00000340748 KIF21BO75037 1637 aa16.11■□□□□ 0.17
DNMT1-201ENST00000340748 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms