RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1.01
BRAT1-201ENST00000340611 GLI2P10070 1586 aa21.33■■□□□ 1
BRAT1-201ENST00000340611 PPRC1Q5VV67 1664 aaKnown RBP21.31■■□□□ 1
BRAT1-201ENST00000340611 TONSLQ96HA7 1378 aa21.31■■□□□ 1
BRAT1-201ENST00000340611 ANKRD30BQ9BXX2 1392 aa21.31■■□□□ 1
BRAT1-201ENST00000340611 CFAP74Q9C0B2 1584 aa21.31■■□□□ 1
BRAT1-201ENST00000340611 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
BRAT1-201ENST00000340611 NEO1Q92859 1461 aa21.3■■□□□ 1
BRAT1-201ENST00000340611 FAM135AQ9P2D6 1515 aa21.28■■□□□ 1
BRAT1-201ENST00000340611 TRHP20396 242 aaPredicted RBP21.28■■□□□ 1
BRAT1-201ENST00000340611 ERBINQ96RT1 1412 aa21.26■□□□□ 0.99
BRAT1-201ENST00000340611 YEATS2Q9ULM3 1422 aa21.25■□□□□ 0.99
BRAT1-201ENST00000340611 KDM5CP41229 1560 aa21.24■□□□□ 0.99
BRAT1-201ENST00000340611 GGT6Q6P531 493 aa21.24■□□□□ 0.99
BRAT1-201ENST00000340611 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
BRAT1-201ENST00000340611 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
BRAT1-201ENST00000340611 L3MBTL2Q969R5 705 aa21.24■□□□□ 0.99
BRAT1-201ENST00000340611 RICTORQ6R327 1708 aa21.24■□□□□ 0.99
BRAT1-201ENST00000340611 PPP1R15AO75807 674 aaPredicted RBP21.23■□□□□ 0.99
BRAT1-201ENST00000340611 HECW2Q9P2P5 1572 aa21.23■□□□□ 0.99
BRAT1-201ENST00000340611 DHX29Q7Z478 1369 aaKnown RBP21.23■□□□□ 0.99
BRAT1-201ENST00000340611 ABCA6Q8N139 1617 aa21.23■□□□□ 0.99
BRAT1-201ENST00000340611 UNC13BO14795 1591 aa21.23■□□□□ 0.99
BRAT1-201ENST00000340611 COL17A1Q9UMD9 1497 aaPredicted RBP21.22■□□□□ 0.99
BRAT1-201ENST00000340611 FRMPD1Q5SYB0 1578 aa21.21■□□□□ 0.99
BRAT1-201ENST00000340611 KDM5DQ9BY66 1539 aa21.2■□□□□ 0.98
BRAT1-201ENST00000340611 A2MP01023 1474 aa21.2■□□□□ 0.98
BRAT1-201ENST00000340611 MLH3Q9UHC1 1453 aa21.19■□□□□ 0.98
BRAT1-201ENST00000340611 ZNF326Q5BKZ1 582 aaKnown RBP21.17■□□□□ 0.98
BRAT1-201ENST00000340611 RPRD2Q5VT52 1461 aaKnown RBP21.16■□□□□ 0.98
BRAT1-201ENST00000340611 RBM19Q9Y4C8 960 aaKnown RBP21.16■□□□□ 0.98
BRAT1-201ENST00000340611 IQGAP3Q86VI3 1631 aa21.16■□□□□ 0.98
BRAT1-201ENST00000340611 CFAP65Q6ZU64 1925 aaKnown RBP21.15■□□□□ 0.98
BRAT1-201ENST00000340611 TEX14Q8IWB6 1497 aa21.15■□□□□ 0.98
BRAT1-201ENST00000340611 RGL3Q3MIN7 710 aa21.15■□□□□ 0.98
BRAT1-201ENST00000340611 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.97
BRAT1-201ENST00000340611 MAGI2Q86UL8 1455 aa21.14■□□□□ 0.97
BRAT1-201ENST00000340611 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
BRAT1-201ENST00000340611 KDM2AQ9Y2K7 1162 aa21.12■□□□□ 0.97
BRAT1-201ENST00000340611 MROH1Q8NDA8 1641 aa21.12■□□□□ 0.97
BRAT1-201ENST00000340611 TIMELESSQ9UNS1 1208 aa21.11■□□□□ 0.97
BRAT1-201ENST00000340611 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
BRAT1-201ENST00000340611 MLECQ14165 292 aa21.1■□□□□ 0.97
BRAT1-201ENST00000340611 DEPDC5O75140 1603 aa21.1■□□□□ 0.97
BRAT1-201ENST00000340611 CCDC136Q96JN2 1154 aa21.09■□□□□ 0.97
BRAT1-201ENST00000340611 E9PCH4 1651 aa21.09■□□□□ 0.97
BRAT1-201ENST00000340611 KANK1Q14678 1352 aa21.08■□□□□ 0.96
BRAT1-201ENST00000340611 CEP152O94986 1710 aa21.08■□□□□ 0.96
BRAT1-201ENST00000340611 MSH5O43196 834 aa21.08■□□□□ 0.96
BRAT1-201ENST00000340611 CCDC144AA2RUR9 1427 aa21.06■□□□□ 0.96
BRAT1-201ENST00000340611 EIF2AK4Q9P2K8 1649 aaKnown RBP21.05■□□□□ 0.96
BRAT1-201ENST00000340611 WASHC2CQ9Y4E1 1318 aa21.05■□□□□ 0.96
BRAT1-201ENST00000340611 DCAF11Q8TEB1 546 aa21.05■□□□□ 0.96
BRAT1-201ENST00000340611 PRDM15P57071 1507 aaPredicted RBP21.04■□□□□ 0.96
BRAT1-201ENST00000340611 SIGLEC1Q9BZZ2 1709 aa21.03■□□□□ 0.96
BRAT1-201ENST00000340611 SALL2Q9Y467 1007 aaPredicted RBP21.03■□□□□ 0.96
BRAT1-201ENST00000340611 UGGT1Q9NYU2 1555 aa21.02■□□□□ 0.96
BRAT1-201ENST00000340611 ATP10AO60312 1499 aa21.01■□□□□ 0.95
BRAT1-201ENST00000340611 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
BRAT1-201ENST00000340611 ZMYM4Q5VZL5 1548 aa21.01■□□□□ 0.95
BRAT1-201ENST00000340611 TET3O43151 1660 aa21■□□□□ 0.95
BRAT1-201ENST00000340611 FKBP8Q14318 412 aa20.99■□□□□ 0.95
BRAT1-201ENST00000340611 RNF17Q9BXT8 1623 aaKnown RBP20.98■□□□□ 0.95
BRAT1-201ENST00000340611 DEKP35659 375 aaKnown RBP20.96■□□□□ 0.95
BRAT1-201ENST00000340611 SPHKAPQ2M3C7 1700 aa20.95■□□□□ 0.94
BRAT1-201ENST00000340611 ARID4BQ4LE39 1312 aaPredicted RBP20.95■□□□□ 0.94
BRAT1-201ENST00000340611 CHGAP10645 457 aaKnown RBP20.94■□□□□ 0.94
BRAT1-201ENST00000340611 NPATQ14207 1427 aa20.94■□□□□ 0.94
BRAT1-201ENST00000340611 EFCAB6Q5THR3 1501 aa20.94■□□□□ 0.94
BRAT1-201ENST00000340611 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
BRAT1-201ENST00000340611 ABCC3O15438 1527 aa20.94■□□□□ 0.94
BRAT1-201ENST00000340611 CLTCL1P53675 1640 aa20.93■□□□□ 0.94
BRAT1-201ENST00000340611 HSPA5P11021 654 aaKnown RBP20.91■□□□□ 0.94
BRAT1-201ENST00000340611 FBXO31Q5XUX0 539 aaPredicted RBP20.91■□□□□ 0.94
BRAT1-201ENST00000340611 PTPRTO14522 1441 aa20.89■□□□□ 0.93
BRAT1-201ENST00000340611 TRPM2O94759 1503 aa20.89■□□□□ 0.93
BRAT1-201ENST00000340611 BCORL1Q5H9F3 1711 aa20.88■□□□□ 0.93
BRAT1-201ENST00000340611 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
BRAT1-201ENST00000340611 ARHGEF40Q8TER5 1519 aa20.88■□□□□ 0.93
BRAT1-201ENST00000340611 CAMSAP1Q5T5Y3 1602 aa20.88■□□□□ 0.93
BRAT1-201ENST00000340611 NUTM2DQ5VT03 806 aaPredicted RBP20.86■□□□□ 0.93
BRAT1-201ENST00000340611 NBPF1Q3BBV0 1214 aa20.86■□□□□ 0.93
BRAT1-201ENST00000340611 LMTK2Q8IWU2 1503 aa20.86■□□□□ 0.93
BRAT1-201ENST00000340611 DDX10Q13206 875 aaKnown RBP20.85■□□□□ 0.93
BRAT1-201ENST00000340611 SPATA31E1Q6ZUB1 1445 aa20.85■□□□□ 0.93
BRAT1-201ENST00000340611 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.84■□□□□ 0.93
BRAT1-201ENST00000340611 EIF4G2P78344 907 aaKnown RBP eCLIP20.83■□□□□ 0.92
BRAT1-201ENST00000340611 CLTCQ00610 1675 aaKnown RBP20.81■□□□□ 0.92
BRAT1-201ENST00000340611 C11orf95C9JLR9 678 aaPredicted RBP20.81■□□□□ 0.92
BRAT1-201ENST00000340611 CARD11Q9BXL7 1154 aa20.81■□□□□ 0.92
BRAT1-201ENST00000340611 MROH2AA6NES4 1674 aa20.8■□□□□ 0.92
BRAT1-201ENST00000340611 IDI1Q13907 227 aa20.79■□□□□ 0.92
BRAT1-201ENST00000340611 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
BRAT1-201ENST00000340611 SYNMO15061 1565 aa20.77■□□□□ 0.92
BRAT1-201ENST00000340611 RTN4Q9NQC3 1192 aaKnown RBP20.77■□□□□ 0.92
BRAT1-201ENST00000340611 AGLP35573 1532 aa20.77■□□□□ 0.92
BRAT1-201ENST00000340611 ESF1Q9H501 851 aaKnown RBP20.77■□□□□ 0.91
BRAT1-201ENST00000340611 UHRF1BP1Q6BDS2 1440 aa20.76■□□□□ 0.91
BRAT1-201ENST00000340611 ROCK2O75116 1388 aaKnown RBP20.76■□□□□ 0.91
BRAT1-201ENST00000340611 KIF1BO60333 1816 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms