RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 C20orf194Q5TEA3 1177 aa26.53■■□□□ 1.84
UBC-201ENST00000339647 IQGAP2Q13576 1575 aa26.52■■□□□ 1.84
UBC-201ENST00000339647 DAXXQ9UER7 740 aaPredicted RBP26.52■■□□□ 1.84
UBC-201ENST00000339647 PARD3Q8TEW0 1356 aa26.5■■□□□ 1.83
UBC-201ENST00000339647 IFT140Q96RY7 1462 aa26.5■■□□□ 1.83
UBC-201ENST00000339647 EIF5BO60841 1220 aaKnown RBP26.49■■□□□ 1.83
UBC-201ENST00000339647 ZNF777Q9ULD5 760 aaPredicted RBP26.48■■□□□ 1.83
UBC-201ENST00000339647 E9PCH4 1651 aa26.48■■□□□ 1.83
UBC-201ENST00000339647 DCAF11Q8TEB1 546 aa26.47■■□□□ 1.83
UBC-201ENST00000339647 CHMP7Q8WUX9 453 aaPredicted RBP26.46■■□□□ 1.83
UBC-201ENST00000339647 CFDP1Q9UEE9 299 aaPredicted RBP26.46■■□□□ 1.83
UBC-201ENST00000339647 UBE2Q2Q8WVN8 375 aa26.46■■□□□ 1.83
UBC-201ENST00000339647 KDM2BQ8NHM5 1336 aa26.45■■□□□ 1.83
UBC-201ENST00000339647 CAMSAP2Q08AD1 1489 aa26.45■■□□□ 1.82
UBC-201ENST00000339647 FRAT2O75474 233 aaPredicted RBP26.44■■□□□ 1.82
UBC-201ENST00000339647 ADAMTS12P58397 1594 aa26.44■■□□□ 1.82
UBC-201ENST00000339647 PER1O15534 1290 aaPredicted RBP26.43■■□□□ 1.82
UBC-201ENST00000339647 CC2D1BQ5T0F9 858 aaKnown RBP26.43■■□□□ 1.82
UBC-201ENST00000339647 C8orf34Q49A92 452 aa26.42■■□□□ 1.82
UBC-201ENST00000339647 KIAA0586Q9BVV6 1533 aa26.42■■□□□ 1.82
UBC-201ENST00000339647 EIF4G3O43432 1585 aaKnown RBP26.4■■□□□ 1.82
UBC-201ENST00000339647 NUP155O75694 1391 aa26.4■■□□□ 1.82
UBC-201ENST00000339647 NUP153P49790 1475 aaKnown RBP26.4■■□□□ 1.82
UBC-201ENST00000339647 FAM161AQ3B820 660 aa26.4■■□□□ 1.82
UBC-201ENST00000339647 ADGBQ8N7X0 1667 aa26.39■■□□□ 1.81
UBC-201ENST00000339647 PRG4Q92954 1404 aaPredicted RBP26.38■■□□□ 1.81
UBC-201ENST00000339647 ANKRD50Q9ULJ7 1429 aa26.38■■□□□ 1.81
UBC-201ENST00000339647 ARHGEF12Q9NZN5 1544 aa26.38■■□□□ 1.81
UBC-201ENST00000339647 CENPQQ7L2Z9 268 aaPredicted RBP26.37■■□□□ 1.81
UBC-201ENST00000339647 BLMP54132 1417 aaPredicted RBP26.37■■□□□ 1.81
UBC-201ENST00000339647 ANKRD30AQ9BXX3 1397 aa26.36■■□□□ 1.81
UBC-201ENST00000339647 ADGRL2O95490 1459 aa26.36■■□□□ 1.81
UBC-201ENST00000339647 RGS3P49796 1198 aa26.32■■□□□ 1.8
UBC-201ENST00000339647 GPATCH8Q9UKJ3 1502 aaKnown RBP26.31■■□□□ 1.8
UBC-201ENST00000339647 NBPF1Q3BBV0 1214 aa26.3■■□□□ 1.8
UBC-201ENST00000339647 ZMYM4Q5VZL5 1548 aa26.29■■□□□ 1.8
UBC-201ENST00000339647 ADAMTS8Q9UP79 889 aa26.28■■□□□ 1.8
UBC-201ENST00000339647 GRIN2AQ12879 1464 aa26.28■■□□□ 1.8
UBC-201ENST00000339647 PANK3Q9H999 370 aa26.28■■□□□ 1.8
UBC-201ENST00000339647 TROQ12816 1431 aaPredicted RBP26.27■■□□□ 1.8
UBC-201ENST00000339647 FAM43AQ8N2R8 423 aa26.27■■□□□ 1.8
UBC-201ENST00000339647 CROCC2H7BZ55 1655 aa26.26■■□□□ 1.79
UBC-201ENST00000339647 RAPGEF6Q8TEU7 1601 aa26.26■■□□□ 1.79
UBC-201ENST00000339647 INSRP06213 1382 aa26.25■■□□□ 1.79
UBC-201ENST00000339647 DISP1Q96F81 1524 aa26.25■■□□□ 1.79
UBC-201ENST00000339647 DUSP27Q5VZP5 1158 aa26.25■■□□□ 1.79
UBC-201ENST00000339647 DISP3Q9P2K9 1392 aa26.23■■□□□ 1.79
UBC-201ENST00000339647 CEP170Q5SW79 1584 aa26.23■■□□□ 1.79
UBC-201ENST00000339647 KIAA0556O60303 1618 aa26.23■■□□□ 1.79
UBC-201ENST00000339647 PLEKHH1Q9ULM0 1364 aa26.23■■□□□ 1.79
UBC-201ENST00000339647 PLEKHH2Q8IVE3 1493 aa26.22■■□□□ 1.79
UBC-201ENST00000339647 ITSN2Q9NZM3 1697 aa26.22■■□□□ 1.79
UBC-201ENST00000339647 RSPH6AQ9H0K4 717 aa26.22■■□□□ 1.79
UBC-201ENST00000339647 RGL3Q3MIN7 710 aa26.21■■□□□ 1.79
UBC-201ENST00000339647 POGKQ9P215 609 aa26.19■■□□□ 1.78
UBC-201ENST00000339647 PRAG1Q86YV5 1406 aa26.19■■□□□ 1.78
UBC-201ENST00000339647 TESK2Q96S53 571 aa26.19■■□□□ 1.78
UBC-201ENST00000339647 JPH4Q96JJ6 628 aa26.18■■□□□ 1.78
UBC-201ENST00000339647 KDM5DQ9BY66 1539 aa26.17■■□□□ 1.78
UBC-201ENST00000339647 COL17A1Q9UMD9 1497 aaPredicted RBP26.17■■□□□ 1.78
UBC-201ENST00000339647 TRPM1Q7Z4N2 1603 aa26.17■■□□□ 1.78
UBC-201ENST00000339647 C9orf84Q5VXU9 1444 aa26.16■■□□□ 1.78
UBC-201ENST00000339647 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.14■■□□□ 1.78
UBC-201ENST00000339647 GOLGA2Q08379 1002 aa26.13■■□□□ 1.77
UBC-201ENST00000339647 USP19O94966 1318 aa26.13■■□□□ 1.77
UBC-201ENST00000339647 SYNJ2O15056 1496 aa26.13■■□□□ 1.77
UBC-201ENST00000339647 ZNF521Q96K83 1311 aa26.12■■□□□ 1.77
UBC-201ENST00000339647 WDR43Q15061 677 aaKnown RBP eCLIP26.11■■□□□ 1.77
UBC-201ENST00000339647 PLB1Q6P1J6 1458 aa26.1■■□□□ 1.77
UBC-201ENST00000339647 SEC24BO95487 1268 aa26.1■■□□□ 1.77
UBC-201ENST00000339647 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
UBC-201ENST00000339647 TSPY4P0CV99 314 aa26.09■■□□□ 1.77
UBC-201ENST00000339647 TSPY10P0CW01 314 aa26.09■■□□□ 1.77
UBC-201ENST00000339647 PTPRGP23470 1445 aa26.09■■□□□ 1.77
UBC-201ENST00000339647 ERBINQ96RT1 1412 aa26.09■■□□□ 1.77
UBC-201ENST00000339647 RRAGDQ9NQL2 400 aaPredicted RBP26.09■■□□□ 1.77
UBC-201ENST00000339647 IGHDP01880 384 aa26.08■■□□□ 1.76
UBC-201ENST00000339647 SLKQ9H2G2 1235 aaPredicted RBP26.08■■□□□ 1.76
UBC-201ENST00000339647 GPRASP1Q5JY77 1395 aa26.08■■□□□ 1.76
UBC-201ENST00000339647 PPP2R1AP30153 589 aa26.07■■□□□ 1.76
UBC-201ENST00000339647 SLFN5Q08AF3 891 aa26.07■■□□□ 1.76
UBC-201ENST00000339647 CDC42BPAQ5VT25 1732 aa26.06■■□□□ 1.76
UBC-201ENST00000339647 TMF1P82094 1093 aa26.06■■□□□ 1.76
UBC-201ENST00000339647 BCAR3O75815 825 aa26.06■■□□□ 1.76
UBC-201ENST00000339647 SPINK5Q9NQ38 1064 aaPredicted RBP26.05■■□□□ 1.76
UBC-201ENST00000339647 CCDC144AA2RUR9 1427 aa26.05■■□□□ 1.76
UBC-201ENST00000339647 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.765e-20■■■□□ 15.9
UBC-201ENST00000339647 ADCY10Q96PN6 1610 aa26.04■■□□□ 1.76
UBC-201ENST00000339647 SHANK2Q9UPX8 1470 aa26.03■■□□□ 1.76
UBC-201ENST00000339647 CCDC146Q8IYE0 955 aa26.02■■□□□ 1.76
UBC-201ENST00000339647 PRDM15P57071 1507 aaPredicted RBP26.01■■□□□ 1.75
UBC-201ENST00000339647 A2MP01023 1474 aa26.01■■□□□ 1.75
UBC-201ENST00000339647 EIF3AQ14152 1382 aaKnown RBP26.01■■□□□ 1.75
UBC-201ENST00000339647 FAM135AQ9P2D6 1515 aa26■■□□□ 1.75
UBC-201ENST00000339647 KNSTRNQ9Y448 316 aa25.99■■□□□ 1.75
UBC-201ENST00000339647 TRMT2AQ8IZ69 625 aaKnown RBP25.99■■□□□ 1.75
UBC-201ENST00000339647 ARXQ96QS3 562 aa25.99■■□□□ 1.75
UBC-201ENST00000339647 MAGI2Q86UL8 1455 aa25.99■■□□□ 1.75
UBC-201ENST00000339647 BECN1Q14457 450 aa25.98■■□□□ 1.75
UBC-201ENST00000339647 PLA2R1Q13018 1463 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms