RNA–Protein interactions for RNA: ENST00000338932.7

SPTBN4-201, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-201ENST00000338932 NLRP13Q86W25 1043 aa24.56■■□□□ 1.52
SPTBN4-201ENST00000338932 RUFY1Q96T51 708 aa24.56■■□□□ 1.52
SPTBN4-201ENST00000338932 RDXP35241 583 aaKnown RBP24.55■■□□□ 1.52
SPTBN4-201ENST00000338932 HSP90B2PQ58FF3 399 aa24.55■■□□□ 1.52
SPTBN4-201ENST00000338932 CCP110O43303 1012 aa24.55■■□□□ 1.52
SPTBN4-201ENST00000338932 CENPJQ9HC77 1338 aaPredicted RBP24.54■■□□□ 1.52
SPTBN4-201ENST00000338932 H3BQV1 296 aa24.54■■□□□ 1.52
SPTBN4-201ENST00000338932 IFFO2Q5TF58 517 aa24.54■■□□□ 1.52
SPTBN4-201ENST00000338932 SPRYD3Q8NCJ5 442 aa24.54■■□□□ 1.52
SPTBN4-201ENST00000338932 ERCC4Q92889 916 aaPredicted RBP24.54■■□□□ 1.52
SPTBN4-201ENST00000338932 DCAF11Q8TEB1 546 aa24.53■■□□□ 1.52
SPTBN4-201ENST00000338932 WWC1Q8IX03 1113 aa24.53■■□□□ 1.52
SPTBN4-201ENST00000338932 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
SPTBN4-201ENST00000338932 TRIM6-TRIM34B2RNG4 842 aa24.53■■□□□ 1.52
SPTBN4-201ENST00000338932 CCDC191Q8NCU4 936 aa24.53■■□□□ 1.52
SPTBN4-201ENST00000338932 NAT10Q9H0A0 1025 aaKnown RBP24.53■■□□□ 1.52
SPTBN4-201ENST00000338932 CGNL1Q0VF96 1302 aa24.51■■□□□ 1.51
SPTBN4-201ENST00000338932 ZBED9Q6R2W3 1325 aa24.51■■□□□ 1.51
SPTBN4-201ENST00000338932 SRPK2P78362 688 aaKnown RBP24.51■■□□□ 1.51
SPTBN4-201ENST00000338932 GORABQ5T7V8 394 aa24.51■■□□□ 1.51
SPTBN4-201ENST00000338932 CCDC47Q96A33 483 aaKnown RBP24.51■■□□□ 1.51
SPTBN4-201ENST00000338932 CPLX2Q6PUV4 134 aaKnown RBP24.5■■□□□ 1.51
SPTBN4-201ENST00000338932 TERF2IPQ9NYB0 399 aa24.5■■□□□ 1.51
SPTBN4-201ENST00000338932 RUFY2Q8WXA3 655 aa24.49■■□□□ 1.51
SPTBN4-201ENST00000338932 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.49■■□□□ 1.51
SPTBN4-201ENST00000338932 SMC4Q9NTJ3 1288 aa24.48■■□□□ 1.51
SPTBN4-201ENST00000338932 LETM1O95202 739 aaPredicted RBP24.48■■□□□ 1.51
SPTBN4-201ENST00000338932 MFAP1P55081 439 aaKnown RBP24.48■■□□□ 1.51
SPTBN4-201ENST00000338932 HMGN5P82970 282 aaKnown RBP24.48■■□□□ 1.51
SPTBN4-201ENST00000338932 CARMIL2Q6F5E8 1435 aa24.47■■□□□ 1.51
SPTBN4-201ENST00000338932 DDX49Q9Y6V7 483 aaKnown RBP24.47■■□□□ 1.51
SPTBN4-201ENST00000338932 ISY1Q9ULR0 285 aaKnown RBP24.47■■□□□ 1.51
SPTBN4-201ENST00000338932 ANKRD30AQ9BXX3 1397 aa24.47■■□□□ 1.51
SPTBN4-201ENST00000338932 KIF7Q2M1P5 1343 aa24.46■■□□□ 1.51
SPTBN4-201ENST00000338932 CAGE1Q8TC20 777 aa24.46■■□□□ 1.51
SPTBN4-201ENST00000338932 NUCB2P80303 420 aa24.46■■□□□ 1.51
SPTBN4-201ENST00000338932 FAM43AQ8N2R8 423 aa24.44■■□□□ 1.5
SPTBN4-201ENST00000338932 CUX1P39880 1505 aa24.44■■□□□ 1.5
SPTBN4-201ENST00000338932 TAOK2Q9UL54 1235 aa24.43■■□□□ 1.5
SPTBN4-201ENST00000338932 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
SPTBN4-201ENST00000338932 FAM184AQ8NB25 1140 aa24.43■■□□□ 1.5
SPTBN4-201ENST00000338932 PRM3Q9NNZ6 103 aa24.42■■□□□ 1.5
SPTBN4-201ENST00000338932 AKAP17AQ02040 695 aaKnown RBP24.42■■□□□ 1.5
SPTBN4-201ENST00000338932 CAVIN1Q6NZI2 390 aaKnown RBP24.42■■□□□ 1.5
SPTBN4-201ENST00000338932 CCDC173Q0VFZ6 552 aa24.42■■□□□ 1.5
SPTBN4-201ENST00000338932 RSPH4AQ5TD94 716 aa24.42■■□□□ 1.5
SPTBN4-201ENST00000338932 PRDM2Q13029 1718 aa24.41■■□□□ 1.5
SPTBN4-201ENST00000338932 VSIG10Q8N0Z9 540 aa24.4■■□□□ 1.5
SPTBN4-201ENST00000338932 CCDC39Q9UFE4 941 aa24.4■■□□□ 1.5
SPTBN4-201ENST00000338932 ERCC6Q03468 1493 aa24.39■■□□□ 1.49
SPTBN4-201ENST00000338932 RNF20Q5VTR2 975 aa24.39■■□□□ 1.49
SPTBN4-201ENST00000338932 MYBBP1AQ9BQG0 1328 aaKnown RBP24.39■■□□□ 1.49
SPTBN4-201ENST00000338932 ZRSR2Q15696 482 aaKnown RBP24.38■■□□□ 1.49
SPTBN4-201ENST00000338932 TSHZ2Q9NRE2 1034 aa24.38■■□□□ 1.49
SPTBN4-201ENST00000338932 ZKSCAN1P17029 563 aaPredicted RBP24.37■■□□□ 1.49
SPTBN4-201ENST00000338932 U2AF1L5P0DN76 240 aaPredicted RBP24.37■■□□□ 1.49
SPTBN4-201ENST00000338932 U2AF1Q01081 240 aaKnown RBP eCLIP24.37■■□□□ 1.49
SPTBN4-201ENST00000338932 TAF7LQ5H9L4 462 aa24.37■■□□□ 1.49
SPTBN4-201ENST00000338932 TXLNBQ8N3L3 684 aa24.36■■□□□ 1.49
SPTBN4-201ENST00000338932 E9PSI1 815 aa24.36■■□□□ 1.49
SPTBN4-201ENST00000338932 SYNE3Q6ZMZ3 975 aa24.35■■□□□ 1.49
SPTBN4-201ENST00000338932 ARID3AQ99856 593 aa24.35■■□□□ 1.49
SPTBN4-201ENST00000338932 TRIM29Q14134 588 aa24.35■■□□□ 1.49
SPTBN4-201ENST00000338932 USP8P40818 1118 aa24.35■■□□□ 1.49
SPTBN4-201ENST00000338932 HOMER1Q86YM7 354 aa24.35■■□□□ 1.49
SPTBN4-201ENST00000338932 CCAR2Q8N163 923 aaKnown RBP24.34■■□□□ 1.49
SPTBN4-201ENST00000338932 KCNH8Q96L42 1107 aa24.34■■□□□ 1.49
SPTBN4-201ENST00000338932 AMOTL1Q8IY63 956 aa24.34■■□□□ 1.49
SPTBN4-201ENST00000338932 HSPA5P11021 654 aaKnown RBP24.33■■□□□ 1.48
SPTBN4-201ENST00000338932 RAB3GAP2Q9H2M9 1393 aa24.32■■□□□ 1.48
SPTBN4-201ENST00000338932 CHMP5Q9NZZ3 219 aa24.32■■□□□ 1.48
SPTBN4-201ENST00000338932 PES1O00541 588 aaKnown RBP24.32■■□□□ 1.48
SPTBN4-201ENST00000338932 GOLGA6L7A0A1B0GV03 622 aa24.32■■□□□ 1.48
SPTBN4-201ENST00000338932 PDIA4P13667 645 aaKnown RBP24.31■■□□□ 1.48
SPTBN4-201ENST00000338932 APPP05067 770 aa24.3■■□□□ 1.48
SPTBN4-201ENST00000338932 MRE11P49959 708 aa24.29■■□□□ 1.48
SPTBN4-201ENST00000338932 INCENPQ9NQS7 918 aa24.29■■□□□ 1.48
SPTBN4-201ENST00000338932 DDX19BQ9UMR2 479 aa24.29■■□□□ 1.48
SPTBN4-201ENST00000338932 MNS1Q8NEH6 495 aa24.28■■□□□ 1.48
SPTBN4-201ENST00000338932 MARCH6O60337 910 aa24.28■■□□□ 1.48
SPTBN4-201ENST00000338932 SASS6Q6UVJ0 657 aa24.28■■□□□ 1.48
SPTBN4-201ENST00000338932 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.28■■□□□ 1.48
SPTBN4-201ENST00000338932 SCAPERQ9BY12 1400 aa24.28■■□□□ 1.48
SPTBN4-201ENST00000338932 LEKR1Q6ZMV7 388 aa24.27■■□□□ 1.48
SPTBN4-201ENST00000338932 CARMIL1Q5VZK9 1371 aa24.27■■□□□ 1.48
SPTBN4-201ENST00000338932 NEXNQ0ZGT2 675 aa24.27■■□□□ 1.48
SPTBN4-201ENST00000338932 LMOD2Q6P5Q4 547 aa24.27■■□□□ 1.48
SPTBN4-201ENST00000338932 MCM2P49736 904 aa24.26■■□□□ 1.47
SPTBN4-201ENST00000338932 SIN3AQ96ST3 1273 aa24.26■■□□□ 1.47
SPTBN4-201ENST00000338932 H0YHG0 523 aa24.26■■□□□ 1.47
SPTBN4-201ENST00000338932 MBD3O95983 291 aa24.26■■□□□ 1.47
SPTBN4-201ENST00000338932 TCEAL9Q9UHQ7 104 aa24.25■■□□□ 1.47
SPTBN4-201ENST00000338932 CUX2O14529 1486 aa24.25■■□□□ 1.47
SPTBN4-201ENST00000338932 PDE4AP27815 886 aa24.24■■□□□ 1.47
SPTBN4-201ENST00000338932 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
SPTBN4-201ENST00000338932 CREBRFQ8IUR6 639 aa24.23■■□□□ 1.47
SPTBN4-201ENST00000338932 NINLQ9Y2I6 1382 aa24.23■■□□□ 1.47
SPTBN4-201ENST00000338932 PDCP20941 246 aa24.22■■□□□ 1.47
SPTBN4-201ENST00000338932 TSPYL1Q9H0U9 437 aa24.22■■□□□ 1.47
SPTBN4-201ENST00000338932 LUC7LQ9NQ29 371 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms