RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 ATP7AQ04656 1500 aa26.27■■□□□ 1.8
TSPO-202ENST00000337554 THEMISQ8N1K5 641 aaPredicted RBP26.25■■□□□ 1.79
TSPO-202ENST00000337554 LRRIQ1Q96JM4 1722 aa26.25■■□□□ 1.79
TSPO-202ENST00000337554 INO80Q9ULG1 1556 aaPredicted RBP26.24■■□□□ 1.79
TSPO-202ENST00000337554 SYCP2Q9BX26 1530 aa26.24■■□□□ 1.79
TSPO-202ENST00000337554 FMN1Q68DA7 1419 aa26.23■■□□□ 1.79
TSPO-202ENST00000337554 HNRNPMP52272 730 aaKnown RBP eCLIP26.22■■□□□ 1.79
TSPO-202ENST00000337554 CDC42BPAQ5VT25 1732 aa26.22■■□□□ 1.79
TSPO-202ENST00000337554 XIRP1Q702N8 1843 aaKnown RBP26.21■■□□□ 1.79
TSPO-202ENST00000337554 UGGT1Q9NYU2 1555 aa26.2■■□□□ 1.78
TSPO-202ENST00000337554 PZPP20742 1482 aa26.19■■□□□ 1.78
TSPO-202ENST00000337554 MIA2Q96PC5 1412 aa26.16■■□□□ 1.78
TSPO-202ENST00000337554 FAM135AQ9P2D6 1515 aa26.15■■□□□ 1.78
TSPO-202ENST00000337554 ZNF777Q9ULD5 760 aaPredicted RBP26.15■■□□□ 1.78
TSPO-202ENST00000337554 NLRP1Q9C000 1473 aa26.15■■□□□ 1.78
TSPO-202ENST00000337554 ZC3H13Q5T200 1668 aaKnown RBP26.15■■□□□ 1.78
TSPO-202ENST00000337554 ARHGAP35Q9NRY4 1499 aa26.11■■□□□ 1.77
TSPO-202ENST00000337554 TRIM52Q96A61 297 aa26.1■■□□□ 1.77
TSPO-202ENST00000337554 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
TSPO-202ENST00000337554 KIAA1107Q9UPP5 1409 aa26.09■■□□□ 1.77
TSPO-202ENST00000337554 ADGBQ8N7X0 1667 aa26.07■■□□□ 1.76
TSPO-202ENST00000337554 GPATCH8Q9UKJ3 1502 aaKnown RBP26.07■■□□□ 1.76
TSPO-202ENST00000337554 KDM5DQ9BY66 1539 aa26.04■■□□□ 1.76
TSPO-202ENST00000337554 LRP6O75581 1613 aa26.02■■□□□ 1.76
TSPO-202ENST00000337554 DHX29Q7Z478 1369 aaKnown RBP26■■□□□ 1.75
TSPO-202ENST00000337554 JCADQ9P266 1359 aa26■■□□□ 1.75
TSPO-202ENST00000337554 EEA1Q15075 1411 aa25.97■■□□□ 1.75
TSPO-202ENST00000337554 TMEM94Q12767 1356 aa25.96■■□□□ 1.75
TSPO-202ENST00000337554 ZNF772Q68DY9 489 aaPredicted RBP25.96■■□□□ 1.75
TSPO-202ENST00000337554 PLEKHH2Q8IVE3 1493 aa25.96■■□□□ 1.75
TSPO-202ENST00000337554 WASHC2CQ9Y4E1 1318 aa25.95■■□□□ 1.75
TSPO-202ENST00000337554 KIF3BO15066 747 aa25.95■■□□□ 1.74
TSPO-202ENST00000337554 LTKP29376 864 aa25.95■■□□□ 1.74
TSPO-202ENST00000337554 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
TSPO-202ENST00000337554 SCAF11Q99590 1463 aaKnown RBP25.94■■□□□ 1.74
TSPO-202ENST00000337554 CDK12Q9NYV4 1490 aaPredicted RBP25.92■■□□□ 1.74
TSPO-202ENST00000337554 PHLPP1O60346 1717 aa25.91■■□□□ 1.74
TSPO-202ENST00000337554 RXRBP28702 533 aa25.91■■□□□ 1.74
TSPO-202ENST00000337554 CCDC18Q5T9S5 1454 aa25.91■■□□□ 1.74
TSPO-202ENST00000337554 CFDP1Q9UEE9 299 aaPredicted RBP25.89■■□□□ 1.74
TSPO-202ENST00000337554 RTEL1-TNFRSF6BF6WH68 1400 aa25.88■■□□□ 1.73
TSPO-202ENST00000337554 NCOA2Q15596 1464 aa25.88■■□□□ 1.73
TSPO-202ENST00000337554 LRRC9Q6ZRR7 1453 aa25.88■■□□□ 1.73
TSPO-202ENST00000337554 MBD5Q9P267 1494 aa25.88■■□□□ 1.73
TSPO-202ENST00000337554 RBM33Q96EV2 1170 aaKnown RBP25.88■■□□□ 1.73
TSPO-202ENST00000337554 ARHGAP23Q9P227 1491 aa25.87■■□□□ 1.73
TSPO-202ENST00000337554 COL16A1Q07092 1604 aaPredicted RBP25.87■■□□□ 1.73
TSPO-202ENST00000337554 UBR1Q8IWV7 1749 aa25.85■■□□□ 1.73
TSPO-202ENST00000337554 CASKIN1Q8WXD9 1431 aa25.85■■□□□ 1.73
TSPO-202ENST00000337554 SPATA31A6Q5VVP1 1343 aa25.85■■□□□ 1.73
TSPO-202ENST00000337554 ZNF644Q9H582 1327 aaPredicted RBP25.85■■□□□ 1.73
TSPO-202ENST00000337554 TXNDC2Q86VQ3 553 aa25.84■■□□□ 1.73
TSPO-202ENST00000337554 SLIT1O75093 1534 aa25.83■■□□□ 1.73
TSPO-202ENST00000337554 MEX3CQ5U5Q3 659 aaKnown RBP25.81■■□□□ 1.72
TSPO-202ENST00000337554 SETBP1Q9Y6X0 1596 aa25.81■■□□□ 1.72
TSPO-202ENST00000337554 ERVK-7P63135 1459 aa25.8■■□□□ 1.72
TSPO-202ENST00000337554 SLAIN2Q9P270 581 aa25.8■■□□□ 1.72
TSPO-202ENST00000337554 FGD6Q6ZV73 1430 aa25.79■■□□□ 1.72
TSPO-202ENST00000337554 KCNA6P17658 529 aa25.78■■□□□ 1.72
TSPO-202ENST00000337554 RGS12O14924 1447 aa25.77■■□□□ 1.72
TSPO-202ENST00000337554 PROSER2Q86WR7 435 aaPredicted RBP25.76■■□□□ 1.71
TSPO-202ENST00000337554 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
TSPO-202ENST00000337554 UBTFP17480 764 aaKnown RBP25.75■■□□□ 1.71
TSPO-202ENST00000337554 CCNB3Q8WWL7 1395 aa25.74■■□□□ 1.71
TSPO-202ENST00000337554 EHMT2Q96KQ7 1210 aa25.74■■□□□ 1.71
TSPO-202ENST00000337554 ABCC3O15438 1527 aa25.73■■□□□ 1.71
TSPO-202ENST00000337554 TIAM1Q13009 1591 aa25.73■■□□□ 1.71
TSPO-202ENST00000337554 ZRANB1Q9UGI0 708 aa25.7■■□□□ 1.7
TSPO-202ENST00000337554 SHPRHQ149N8 1683 aa25.69■■□□□ 1.7
TSPO-202ENST00000337554 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
TSPO-202ENST00000337554 MSH6P52701 1360 aa25.68■■□□□ 1.7
TSPO-202ENST00000337554 AFF2P51816 1311 aa25.66■■□□□ 1.7
TSPO-202ENST00000337554 EID1Q9Y6B2 187 aa25.66■■□□□ 1.7
TSPO-202ENST00000337554 TET3O43151 1660 aa25.66■■□□□ 1.7
TSPO-202ENST00000337554 NKTRP30414 1462 aaKnown RBP25.65■■□□□ 1.7
TSPO-202ENST00000337554 NWD1Q149M9 1564 aa25.65■■□□□ 1.7
TSPO-202ENST00000337554 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
TSPO-202ENST00000337554 SLC26A8Q96RN1 970 aa25.63■■□□□ 1.69
TSPO-202ENST00000337554 AHDC1Q5TGY3 1603 aaPredicted RBP25.62■■□□□ 1.69
TSPO-202ENST00000337554 CAMSAP2Q08AD1 1489 aa25.61■■□□□ 1.69
TSPO-202ENST00000337554 FYCO1Q9BQS8 1478 aa25.61■■□□□ 1.69
TSPO-202ENST00000337554 NUTM2BA6NNL0 878 aaPredicted RBP25.61■■□□□ 1.69
TSPO-202ENST00000337554 NUTM2EB1AL46 878 aaPredicted RBP25.61■■□□□ 1.69
TSPO-202ENST00000337554 NUTM2DQ5VT03 806 aaPredicted RBP25.61■■□□□ 1.69
TSPO-202ENST00000337554 NUTM2AQ8IVF1 878 aaPredicted RBP25.61■■□□□ 1.69
TSPO-202ENST00000337554 DIP2AQ14689 1571 aa25.6■■□□□ 1.69
TSPO-202ENST00000337554 RBM6P78332 1123 aaKnown RBP25.59■■□□□ 1.69
TSPO-202ENST00000337554 CCDC141Q6ZP82 1450 aa25.58■■□□□ 1.69
TSPO-202ENST00000337554 MROH1Q8NDA8 1641 aa25.57■■□□□ 1.68
TSPO-202ENST00000337554 KDM5AP29375 1690 aaKnown RBP25.57■■□□□ 1.68
TSPO-202ENST00000337554 CFAP65Q6ZU64 1925 aaKnown RBP25.57■■□□□ 1.68
TSPO-202ENST00000337554 QTRT2Q9H974 415 aaKnown RBP25.56■■□□□ 1.68
TSPO-202ENST00000337554 ATAD2Q6PL18 1390 aa25.55■■□□□ 1.68
TSPO-202ENST00000337554 PIK3C2BO00750 1634 aa25.53■■□□□ 1.68
TSPO-202ENST00000337554 FOXD1Q16676 465 aa25.52■■□□□ 1.68
TSPO-202ENST00000337554 EP400Q96L91 3159 aa25.51■■□□□ 1.67
TSPO-202ENST00000337554 CEP152O94986 1710 aa25.5■■□□□ 1.67
TSPO-202ENST00000337554 MAST1Q9Y2H9 1570 aa25.46■■□□□ 1.67
TSPO-202ENST00000337554 ARHGAP31Q2M1Z3 1444 aa25.46■■□□□ 1.67
TSPO-202ENST00000337554 RSPH4AQ5TD94 716 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms