RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 ADGRL2O95490 1459 aa23.98■■□□□ 1.43
MRPL55-202ENST00000336300 CEBPAP49715 358 aaPredicted RBP23.97■■□□□ 1.43
MRPL55-202ENST00000336300 ROCK1Q13464 1354 aa23.95■■□□□ 1.42
MRPL55-202ENST00000336300 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.42
MRPL55-202ENST00000336300 ZMYM3Q14202 1370 aa23.94■■□□□ 1.42
MRPL55-202ENST00000336300 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
MRPL55-202ENST00000336300 FAM135AQ9P2D6 1515 aa23.9■■□□□ 1.42
MRPL55-202ENST00000336300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.41
MRPL55-202ENST00000336300 ANKRD50Q9ULJ7 1429 aa23.89■■□□□ 1.41
MRPL55-202ENST00000336300 KANK1Q14678 1352 aa23.89■■□□□ 1.41
MRPL55-202ENST00000336300 MROH2AA6NES4 1674 aa23.88■■□□□ 1.41
MRPL55-202ENST00000336300 CLTCQ00610 1675 aaKnown RBP23.88■■□□□ 1.41
MRPL55-202ENST00000336300 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
MRPL55-202ENST00000336300 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
MRPL55-202ENST00000336300 C3P01024 1663 aa23.85■■□□□ 1.41
MRPL55-202ENST00000336300 NPATQ14207 1427 aa23.82■■□□□ 1.4
MRPL55-202ENST00000336300 SETD1BQ9UPS6 1966 aaKnown RBP23.82■■□□□ 1.4
MRPL55-202ENST00000336300 UHRF1BP1Q6BDS2 1440 aa23.79■■□□□ 1.4
MRPL55-202ENST00000336300 ZC3H13Q5T200 1668 aaKnown RBP23.79■■□□□ 1.4
MRPL55-202ENST00000336300 ABCC3O15438 1527 aa23.79■■□□□ 1.4
MRPL55-202ENST00000336300 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
MRPL55-202ENST00000336300 DEPDC5O75140 1603 aa23.77■■□□□ 1.4
MRPL55-202ENST00000336300 MROH1Q8NDA8 1641 aa23.77■■□□□ 1.4
MRPL55-202ENST00000336300 PZPP20742 1482 aa23.76■■□□□ 1.39
MRPL55-202ENST00000336300 LMTK3Q96Q04 1460 aa23.75■■□□□ 1.39
MRPL55-202ENST00000336300 PREX1Q8TCU6 1659 aa23.74■■□□□ 1.39
MRPL55-202ENST00000336300 FBXO31Q5XUX0 539 aaPredicted RBP23.74■■□□□ 1.39
MRPL55-202ENST00000336300 HFM1A2PYH4 1435 aa23.7■■□□□ 1.38
MRPL55-202ENST00000336300 NAIPQ13075 1403 aa23.7■■□□□ 1.38
MRPL55-202ENST00000336300 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
MRPL55-202ENST00000336300 TNRQ92752 1358 aa23.7■■□□□ 1.38
MRPL55-202ENST00000336300 CEP152O94986 1710 aa23.7■■□□□ 1.38
MRPL55-202ENST00000336300 NUP155O75694 1391 aa23.69■■□□□ 1.38
MRPL55-202ENST00000336300 HSPA2P54652 639 aa23.69■■□□□ 1.38
MRPL55-202ENST00000336300 LMTK2Q8IWU2 1503 aa23.69■■□□□ 1.38
MRPL55-202ENST00000336300 CAMSAP1Q5T5Y3 1602 aa23.68■■□□□ 1.38
MRPL55-202ENST00000336300 VWDEQ8N2E2 1590 aa23.67■■□□□ 1.38
MRPL55-202ENST00000336300 UNC13BO14795 1591 aa23.65■■□□□ 1.38
MRPL55-202ENST00000336300 TRIM52Q96A61 297 aa23.63■■□□□ 1.37
MRPL55-202ENST00000336300 GCC2Q8IWJ2 1684 aa23.63■■□□□ 1.37
MRPL55-202ENST00000336300 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
MRPL55-202ENST00000336300 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
MRPL55-202ENST00000336300 NLRP1Q9C000 1473 aa23.61■■□□□ 1.37
MRPL55-202ENST00000336300 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
MRPL55-202ENST00000336300 A2ML1A8K2U0 1454 aa23.6■■□□□ 1.37
MRPL55-202ENST00000336300 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
MRPL55-202ENST00000336300 MYO3AQ8NEV4 1616 aa23.59■■□□□ 1.37
MRPL55-202ENST00000336300 RPRD2Q5VT52 1461 aaKnown RBP23.59■■□□□ 1.37
MRPL55-202ENST00000336300 THEMISQ8N1K5 641 aaPredicted RBP23.58■■□□□ 1.37
MRPL55-202ENST00000336300 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
MRPL55-202ENST00000336300 CFAP65Q6ZU64 1925 aaKnown RBP23.57■■□□□ 1.36
MRPL55-202ENST00000336300 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
MRPL55-202ENST00000336300 IQGAP3Q86VI3 1631 aa23.57■■□□□ 1.36
MRPL55-202ENST00000336300 TET3O43151 1660 aa23.57■■□□□ 1.36
MRPL55-202ENST00000336300 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
MRPL55-202ENST00000336300 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
MRPL55-202ENST00000336300 STAG3Q9UJ98 1225 aa23.54■■□□□ 1.36
MRPL55-202ENST00000336300 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
MRPL55-202ENST00000336300 PKD2Q13563 968 aa23.51■■□□□ 1.35
MRPL55-202ENST00000336300 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
MRPL55-202ENST00000336300 UGGT1Q9NYU2 1555 aa23.51■■□□□ 1.35
MRPL55-202ENST00000336300 NOS1P29475 1434 aa23.5■■□□□ 1.35
MRPL55-202ENST00000336300 IDI1Q13907 227 aa23.49■■□□□ 1.35
MRPL55-202ENST00000336300 PLA2R1Q13018 1463 aa23.48■■□□□ 1.35
MRPL55-202ENST00000336300 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
MRPL55-202ENST00000336300 E9PCH4 1651 aa23.45■■□□□ 1.34
MRPL55-202ENST00000336300 NCKAP5LQ9HCH0 1330 aa23.45■■□□□ 1.34
MRPL55-202ENST00000336300 RAB3GAP2Q9H2M9 1393 aa23.43■■□□□ 1.34
MRPL55-202ENST00000336300 HRCP23327 699 aa23.43■■□□□ 1.34
MRPL55-202ENST00000336300 SYNMO15061 1565 aa23.42■■□□□ 1.34
MRPL55-202ENST00000336300 MPHOSPH9Q99550 1183 aa23.41■■□□□ 1.34
MRPL55-202ENST00000336300 EID1Q9Y6B2 187 aa23.41■■□□□ 1.34
MRPL55-202ENST00000336300 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
MRPL55-202ENST00000336300 CHGAP10645 457 aaKnown RBP23.4■■□□□ 1.34
MRPL55-202ENST00000336300 PTPRTO14522 1441 aa23.4■■□□□ 1.34
MRPL55-202ENST00000336300 PIK3C2BO00750 1634 aa23.38■■□□□ 1.33
MRPL55-202ENST00000336300 HDGFP51858 240 aaKnown RBP23.38■■□□□ 1.33
MRPL55-202ENST00000336300 UBR1Q8IWV7 1749 aa23.37■■□□□ 1.33
MRPL55-202ENST00000336300 TRIM26Q12899 539 aaPredicted RBP23.36■■□□□ 1.33
MRPL55-202ENST00000336300 TXNDC2Q86VQ3 553 aa23.36■■□□□ 1.33
MRPL55-202ENST00000336300 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
MRPL55-202ENST00000336300 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
MRPL55-202ENST00000336300 ADGRB3O60242 1522 aa23.33■■□□□ 1.33
MRPL55-202ENST00000336300 SPHKAPQ2M3C7 1700 aa23.33■■□□□ 1.32
MRPL55-202ENST00000336300 SLIT1O75093 1534 aa23.31■■□□□ 1.32
MRPL55-202ENST00000336300 FOXD1Q16676 465 aa23.3■■□□□ 1.32
MRPL55-202ENST00000336300 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
MRPL55-202ENST00000336300 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
MRPL55-202ENST00000336300 NPHP4O75161 1426 aaPredicted RBP23.29■■□□□ 1.32
MRPL55-202ENST00000336300 POLR1AO95602 1720 aaPredicted RBP23.29■■□□□ 1.32
MRPL55-202ENST00000336300 LTKP29376 864 aa23.29■■□□□ 1.32
MRPL55-202ENST00000336300 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
MRPL55-202ENST00000336300 TRPM2O94759 1503 aa23.28■■□□□ 1.32
MRPL55-202ENST00000336300 PPP1R15AO75807 674 aaPredicted RBP23.28■■□□□ 1.32
MRPL55-202ENST00000336300 ZNF326Q5BKZ1 582 aaKnown RBP23.28■■□□□ 1.32
MRPL55-202ENST00000336300 MED14O60244 1454 aa23.28■■□□□ 1.32
MRPL55-202ENST00000336300 BCANQ96GW7 911 aa23.26■■□□□ 1.31
MRPL55-202ENST00000336300 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
MRPL55-202ENST00000336300 RIMS2Q9UQ26 1411 aa23.24■■□□□ 1.31
MRPL55-202ENST00000336300 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms