RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 UHRF1BP1Q6BDS2 1440 aa25.93■■□□□ 1.74
RFTN1-201ENST00000334133 RALGAPBQ86X10 1494 aa25.93■■□□□ 1.74
RFTN1-201ENST00000334133 POLR1AO95602 1720 aaPredicted RBP25.92■■□□□ 1.74
RFTN1-201ENST00000334133 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
RFTN1-201ENST00000334133 AFAP1Q8N556 730 aa25.88■■□□□ 1.73
RFTN1-201ENST00000334133 MYO5CQ9NQX4 1742 aa25.88■■□□□ 1.73
RFTN1-201ENST00000334133 PLA2R1Q13018 1463 aa25.87■■□□□ 1.73
RFTN1-201ENST00000334133 ZCCHC11Q5TAX3 1644 aaKnown RBP25.84■■□□□ 1.73
RFTN1-201ENST00000334133 TRAPPC8Q9Y2L5 1435 aa25.84■■□□□ 1.73
RFTN1-201ENST00000334133 PLCH2O75038 1416 aa25.82■■□□□ 1.72
RFTN1-201ENST00000334133 ZBED9Q6R2W3 1325 aa25.82■■□□□ 1.72
RFTN1-201ENST00000334133 MYT1LQ9UL68 1186 aa25.82■■□□□ 1.72
RFTN1-201ENST00000334133 TMC1Q8TDI8 760 aa25.8■■□□□ 1.72
RFTN1-201ENST00000334133 PRAG1Q86YV5 1406 aa25.78■■□□□ 1.72
RFTN1-201ENST00000334133 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
RFTN1-201ENST00000334133 A2MP01023 1474 aa25.77■■□□□ 1.72
RFTN1-201ENST00000334133 MAST1Q9Y2H9 1570 aa25.76■■□□□ 1.71
RFTN1-201ENST00000334133 ARID4BQ4LE39 1312 aaPredicted RBP25.76■■□□□ 1.71
RFTN1-201ENST00000334133 SPAG9O60271 1321 aaKnown RBP25.76■■□□□ 1.71
RFTN1-201ENST00000334133 UNC13BO14795 1591 aa25.75■■□□□ 1.71
RFTN1-201ENST00000334133 DUOX2Q9NRD8 1548 aa25.73■■□□□ 1.71
RFTN1-201ENST00000334133 PLXNC1O60486 1568 aa25.71■■□□□ 1.71
RFTN1-201ENST00000334133 PNISRQ8TF01 805 aaKnown RBP25.71■■□□□ 1.71
RFTN1-201ENST00000334133 SALL2Q9Y467 1007 aaPredicted RBP25.71■■□□□ 1.71
RFTN1-201ENST00000334133 ABCC1P33527 1531 aa25.68■■□□□ 1.7
RFTN1-201ENST00000334133 TRPM1Q7Z4N2 1603 aa25.68■■□□□ 1.7
RFTN1-201ENST00000334133 IQGAP3Q86VI3 1631 aa25.68■■□□□ 1.7
RFTN1-201ENST00000334133 B4GALNT3Q6L9W6 998 aa25.67■■□□□ 1.7
RFTN1-201ENST00000334133 RBM19Q9Y4C8 960 aaKnown RBP25.67■■□□□ 1.7
RFTN1-201ENST00000334133 UHRF1BP1LA0JNW5 1464 aa25.66■■□□□ 1.7
RFTN1-201ENST00000334133 ERBINQ96RT1 1412 aa25.66■■□□□ 1.7
RFTN1-201ENST00000334133 CC2D1BQ5T0F9 858 aaKnown RBP25.66■■□□□ 1.7
RFTN1-201ENST00000334133 DISP3Q9P2K9 1392 aa25.66■■□□□ 1.7
RFTN1-201ENST00000334133 TESK2Q96S53 571 aa25.63■■□□□ 1.69
RFTN1-201ENST00000334133 KIF3BO15066 747 aa25.62■■□□□ 1.69
RFTN1-201ENST00000334133 MYBBP1AQ9BQG0 1328 aaKnown RBP25.61■■□□□ 1.69
RFTN1-201ENST00000334133 PPP4R2Q9NY27 417 aa25.59■■□□□ 1.69
RFTN1-201ENST00000334133 PANK3Q9H999 370 aa25.59■■□□□ 1.69
RFTN1-201ENST00000334133 SCAPERQ9BY12 1400 aa25.58■■□□□ 1.69
RFTN1-201ENST00000334133 RALBP1Q15311 655 aa25.58■■□□□ 1.69
RFTN1-201ENST00000334133 MAGI2Q86UL8 1455 aa25.58■■□□□ 1.68
RFTN1-201ENST00000334133 FANCAO15360 1455 aa25.57■■□□□ 1.68
RFTN1-201ENST00000334133 WDR7Q9Y4E6 1490 aa25.57■■□□□ 1.68
RFTN1-201ENST00000334133 GPRASP1Q5JY77 1395 aa25.56■■□□□ 1.68
RFTN1-201ENST00000334133 PER1O15534 1290 aaPredicted RBP25.56■■□□□ 1.68
RFTN1-201ENST00000334133 NUDCQ9Y266 331 aa25.56■■□□□ 1.68
RFTN1-201ENST00000334133 KTN1Q86UP2 1357 aaKnown RBP25.55■■□□□ 1.68
RFTN1-201ENST00000334133 ZFYVE16Q7Z3T8 1539 aa25.54■■□□□ 1.68
RFTN1-201ENST00000334133 TMF1P82094 1093 aa25.53■■□□□ 1.68
RFTN1-201ENST00000334133 E9PCH4 1651 aa25.52■■□□□ 1.68
RFTN1-201ENST00000334133 SMG6Q86US8 1419 aaKnown RBP25.52■■□□□ 1.68
RFTN1-201ENST00000334133 ATP10AO60312 1499 aa25.51■■□□□ 1.67
RFTN1-201ENST00000334133 BRD4O60885 1362 aaPredicted RBP25.51■■□□□ 1.67
RFTN1-201ENST00000334133 PRDM15P57071 1507 aaPredicted RBP25.5■■□□□ 1.67
RFTN1-201ENST00000334133 COL17A1Q9UMD9 1497 aaPredicted RBP25.5■■□□□ 1.67
RFTN1-201ENST00000334133 NLRP13Q86W25 1043 aa25.5■■□□□ 1.67
RFTN1-201ENST00000334133 ADGRL1O94910 1474 aa25.49■■□□□ 1.67
RFTN1-201ENST00000334133 ASXL2Q76L83 1435 aa25.48■■□□□ 1.67
RFTN1-201ENST00000334133 LRPPRCP42704 1394 aaKnown RBP25.47■■□□□ 1.67
RFTN1-201ENST00000334133 PARD3Q8TEW0 1356 aa25.47■■□□□ 1.67
RFTN1-201ENST00000334133 RTEL1-TNFRSF6BF6WH68 1400 aa25.47■■□□□ 1.67
RFTN1-201ENST00000334133 ATP7AQ04656 1500 aa25.46■■□□□ 1.67
RFTN1-201ENST00000334133 ERICH6BQ5W0A0 696 aa25.45■■□□□ 1.67
RFTN1-201ENST00000334133 KANK1Q14678 1352 aa25.43■■□□□ 1.66
RFTN1-201ENST00000334133 EIF2AK4Q9P2K8 1649 aaKnown RBP25.43■■□□□ 1.66
RFTN1-201ENST00000334133 UGGT1Q9NYU2 1555 aa25.43■■□□□ 1.66
RFTN1-201ENST00000334133 CLTCL1P53675 1640 aa25.41■■□□□ 1.66
RFTN1-201ENST00000334133 CHGAP10645 457 aaKnown RBP25.41■■□□□ 1.66
RFTN1-201ENST00000334133 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
RFTN1-201ENST00000334133 CFAP70Q5T0N1 1121 aa25.4■■□□□ 1.66
RFTN1-201ENST00000334133 CDCA7LQ96GN5 454 aa25.39■■□□□ 1.66
RFTN1-201ENST00000334133 ABCA9Q8IUA7 1624 aa25.39■■□□□ 1.65
RFTN1-201ENST00000334133 TRPM2O94759 1503 aa25.39■■□□□ 1.65
RFTN1-201ENST00000334133 ARAP3Q8WWN8 1544 aa25.38■■□□□ 1.65
RFTN1-201ENST00000334133 SPHKAPQ2M3C7 1700 aa25.37■■□□□ 1.65
RFTN1-201ENST00000334133 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
RFTN1-201ENST00000334133 GGT6Q6P531 493 aa25.37■■□□□ 1.65
RFTN1-201ENST00000334133 PTPRTO14522 1441 aa25.36■■□□□ 1.65
RFTN1-201ENST00000334133 LAMC1P11047 1609 aa25.36■■□□□ 1.65
RFTN1-201ENST00000334133 ADGRF5Q8IZF2 1346 aa25.36■■□□□ 1.65
RFTN1-201ENST00000334133 INO80Q9ULG1 1556 aaPredicted RBP25.35■■□□□ 1.65
RFTN1-201ENST00000334133 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
RFTN1-201ENST00000334133 KNSTRNQ9Y448 316 aa25.35■■□□□ 1.65
RFTN1-201ENST00000334133 CCDC136Q96JN2 1154 aa25.34■■□□□ 1.65
RFTN1-201ENST00000334133 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
RFTN1-201ENST00000334133 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
RFTN1-201ENST00000334133 CFAP65Q6ZU64 1925 aaKnown RBP25.32■■□□□ 1.64
RFTN1-201ENST00000334133 DEPDC5O75140 1603 aa25.32■■□□□ 1.64
RFTN1-201ENST00000334133 TET3O43151 1660 aa25.31■■□□□ 1.64
RFTN1-201ENST00000334133 RNF123Q5XPI4 1314 aa25.31■■□□□ 1.64
RFTN1-201ENST00000334133 CEP152O94986 1710 aa25.3■■□□□ 1.64
RFTN1-201ENST00000334133 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
RFTN1-201ENST00000334133 MSH5O43196 834 aa25.28■■□□□ 1.64
RFTN1-201ENST00000334133 ANP32EQ9BTT0 268 aa25.28■■□□□ 1.64
RFTN1-201ENST00000334133 ADAMTS8Q9UP79 889 aa25.28■■□□□ 1.64
RFTN1-201ENST00000334133 RCAN3Q9UKA8 241 aa25.27■■□□□ 1.64
RFTN1-201ENST00000334133 WASHC2CQ9Y4E1 1318 aa25.27■■□□□ 1.64
RFTN1-201ENST00000334133 MROH1Q8NDA8 1641 aa25.26■■□□□ 1.63
RFTN1-201ENST00000334133 RAPGEF3O95398 923 aa25.26■■□□□ 1.63
RFTN1-201ENST00000334133 NUTM2DQ5VT03 806 aaPredicted RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms