RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 NLRP13Q86W25 1043 aa12.66□□□□□ -0.38
RPGR-201ENST00000318842 KDM5CP41229 1560 aa12.66□□□□□ -0.38
RPGR-201ENST00000318842 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
RPGR-201ENST00000318842 MIA2Q96PC5 1412 aa12.65□□□□□ -0.38
RPGR-201ENST00000318842 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
RPGR-201ENST00000318842 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
RPGR-201ENST00000318842 NUP153P49790 1475 aaKnown RBP12.64□□□□□ -0.39
RPGR-201ENST00000318842 CAMSAP2Q08AD1 1489 aa12.64□□□□□ -0.39
RPGR-201ENST00000318842 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
RPGR-201ENST00000318842 PER1O15534 1290 aaPredicted RBP12.64□□□□□ -0.39
RPGR-201ENST00000318842 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
RPGR-201ENST00000318842 MBD5Q9P267 1494 aa12.64□□□□□ -0.39
RPGR-201ENST00000318842 PLEKHH1Q9ULM0 1364 aa12.64□□□□□ -0.39
RPGR-201ENST00000318842 C8orf34Q49A92 452 aa12.64□□□□□ -0.39
RPGR-201ENST00000318842 POGKQ9P215 609 aa12.64□□□□□ -0.39
RPGR-201ENST00000318842 WDR62O43379 1518 aa12.63□□□□□ -0.39
RPGR-201ENST00000318842 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
RPGR-201ENST00000318842 TNNQ9UQP3 1299 aa12.63□□□□□ -0.39
RPGR-201ENST00000318842 ABCA5Q8WWZ7 1642 aa12.63□□□□□ -0.39
RPGR-201ENST00000318842 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
RPGR-201ENST00000318842 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
RPGR-201ENST00000318842 RALBP1Q15311 655 aa12.62□□□□□ -0.39
RPGR-201ENST00000318842 KIF14Q15058 1648 aa12.62□□□□□ -0.39
RPGR-201ENST00000318842 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
RPGR-201ENST00000318842 IQGAP2Q13576 1575 aa12.61□□□□□ -0.39
RPGR-201ENST00000318842 RRP7AQ9Y3A4 280 aaKnown RBP12.61□□□□□ -0.39
RPGR-201ENST00000318842 IGHDP01880 384 aa12.6□□□□□ -0.39
RPGR-201ENST00000318842 GZF1Q9H116 711 aaPredicted RBP12.6□□□□□ -0.39
RPGR-201ENST00000318842 DNMT1P26358 1616 aaKnown RBP12.6□□□□□ -0.39
RPGR-201ENST00000318842 WASHC2CQ9Y4E1 1318 aa12.6□□□□□ -0.39
RPGR-201ENST00000318842 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
RPGR-201ENST00000318842 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
RPGR-201ENST00000318842 PANK1Q8TE04 598 aa12.59□□□□□ -0.39
RPGR-201ENST00000318842 APAF1O14727 1248 aa12.58□□□□□ -0.4
RPGR-201ENST00000318842 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
RPGR-201ENST00000318842 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
RPGR-201ENST00000318842 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
RPGR-201ENST00000318842 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
RPGR-201ENST00000318842 TESK2Q96S53 571 aa12.57□□□□□ -0.4
RPGR-201ENST00000318842 GPATCH8Q9UKJ3 1502 aaKnown RBP12.57□□□□□ -0.4
RPGR-201ENST00000318842 PARD3Q8TEW0 1356 aa12.57□□□□□ -0.4
RPGR-201ENST00000318842 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
RPGR-201ENST00000318842 COG6Q9Y2V7 657 aa12.57□□□□□ -0.4
RPGR-201ENST00000318842 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
RPGR-201ENST00000318842 KDM2BQ8NHM5 1336 aa12.56□□□□□ -0.4
RPGR-201ENST00000318842 MS4A1P11836 297 aa12.56□□□□□ -0.4
RPGR-201ENST00000318842 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPGR-201ENST00000318842 DISP1Q96F81 1524 aa12.55□□□□□ -0.4
RPGR-201ENST00000318842 POLR1AO95602 1720 aaPredicted RBP12.55□□□□□ -0.4
RPGR-201ENST00000318842 KIF21AQ7Z4S6 1674 aa12.55□□□□□ -0.4
RPGR-201ENST00000318842 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
RPGR-201ENST00000318842 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
RPGR-201ENST00000318842 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
RPGR-201ENST00000318842 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
RPGR-201ENST00000318842 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
RPGR-201ENST00000318842 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.4
RPGR-201ENST00000318842 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
RPGR-201ENST00000318842 PLEKHD1A6NEE1 506 aa12.51□□□□□ -0.41
RPGR-201ENST00000318842 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
RPGR-201ENST00000318842 PANK2Q9BZ23 570 aa12.51□□□□□ -0.41
RPGR-201ENST00000318842 RRAGDQ9NQL2 400 aaPredicted RBP12.51□□□□□ -0.41
RPGR-201ENST00000318842 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
RPGR-201ENST00000318842 TROQ12816 1431 aaPredicted RBP12.5□□□□□ -0.41
RPGR-201ENST00000318842 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
RPGR-201ENST00000318842 TARBP1Q13395 1621 aaKnown RBP12.49□□□□□ -0.41
RPGR-201ENST00000318842 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
RPGR-201ENST00000318842 CENPQQ7L2Z9 268 aaPredicted RBP12.49□□□□□ -0.41
RPGR-201ENST00000318842 USP19O94966 1318 aa12.49□□□□□ -0.41
RPGR-201ENST00000318842 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
RPGR-201ENST00000318842 MAGI2Q86UL8 1455 aa12.47□□□□□ -0.41
RPGR-201ENST00000318842 PRAG1Q86YV5 1406 aa12.47□□□□□ -0.41
RPGR-201ENST00000318842 RLBP1P12271 317 aa12.47□□□□□ -0.41
RPGR-201ENST00000318842 TMF1P82094 1093 aa12.47□□□□□ -0.41
RPGR-201ENST00000318842 JPH4Q96JJ6 628 aa12.47□□□□□ -0.41
RPGR-201ENST00000318842 UHRF1BP1Q6BDS2 1440 aa12.47□□□□□ -0.41
RPGR-201ENST00000318842 PBRM1Q86U86 1689 aa12.46□□□□□ -0.41
RPGR-201ENST00000318842 ERBINQ96RT1 1412 aa12.46□□□□□ -0.41
RPGR-201ENST00000318842 KIAA0556O60303 1618 aa12.46□□□□□ -0.41
RPGR-201ENST00000318842 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
RPGR-201ENST00000318842 ADAMTS12P58397 1594 aa12.46□□□□□ -0.42
RPGR-201ENST00000318842 SLFN5Q08AF3 891 aa12.45□□□□□ -0.42
RPGR-201ENST00000318842 A2MP01023 1474 aa12.45□□□□□ -0.42
RPGR-201ENST00000318842 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
RPGR-201ENST00000318842 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
RPGR-201ENST00000318842 BLMP54132 1417 aaPredicted RBP12.44□□□□□ -0.42
RPGR-201ENST00000318842 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
RPGR-201ENST00000318842 PCDHB15Q9Y5E8 787 aa12.43□□□□□ -0.42
RPGR-201ENST00000318842 NUTM2DQ5VT03 806 aaPredicted RBP12.43□□□□□ -0.42
RPGR-201ENST00000318842 KDM5DQ9BY66 1539 aa12.42□□□□□ -0.42
RPGR-201ENST00000318842 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
RPGR-201ENST00000318842 E9PCH4 1651 aa12.41□□□□□ -0.42
RPGR-201ENST00000318842 ZMYM4Q5VZL5 1548 aa12.41□□□□□ -0.42
RPGR-201ENST00000318842 COL17A1Q9UMD9 1497 aaPredicted RBP12.4□□□□□ -0.42
RPGR-201ENST00000318842 FAM135AQ9P2D6 1515 aa12.4□□□□□ -0.42
RPGR-201ENST00000318842 MFAP1P55081 439 aaKnown RBP12.4□□□□□ -0.42
RPGR-201ENST00000318842 ZNF521Q96K83 1311 aa12.4□□□□□ -0.42
RPGR-201ENST00000318842 PLEKHH2Q8IVE3 1493 aa12.4□□□□□ -0.42
RPGR-201ENST00000318842 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.43
RPGR-201ENST00000318842 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms