RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CCDC9Q9Y3X0 531 aaKnown RBP3.99□□□□□ -1.77
CLOCK-201ENST00000309964 DDX58O95786 925 aaKnown RBP3.99□□□□□ -1.77
CLOCK-201ENST00000309964 NOL10Q9BSC4 688 aaKnown RBP3.99□□□□□ -1.77
CLOCK-201ENST00000309964 LAS1LQ9Y4W2 734 aaKnown RBP3.99□□□□□ -1.77
CLOCK-201ENST00000309964 PKD2Q13563 968 aa3.99□□□□□ -1.77
CLOCK-201ENST00000309964 CPLX2Q6PUV4 134 aaKnown RBP3.99□□□□□ -1.77
CLOCK-201ENST00000309964 DNMBPQ6XZF7 1577 aa3.99□□□□□ -1.77
CLOCK-201ENST00000309964 SLC52A1Q9NWF4 448 aa3.99□□□□□ -1.77
CLOCK-201ENST00000309964 SYNJ1O43426 1573 aa3.99□□□□□ -1.77
CLOCK-201ENST00000309964 DHX57Q6P158 1386 aaKnown RBP3.99□□□□□ -1.77
CLOCK-201ENST00000309964 CYB5RLQ6IPT4 315 aa3.99□□□□□ -1.77
CLOCK-201ENST00000309964 MPHOSPH9Q99550 1183 aa3.99□□□□□ -1.77
CLOCK-201ENST00000309964 UNC13AQ9UPW8 1703 aa3.99□□□□□ -1.77
CLOCK-201ENST00000309964 FGD5Q6ZNL6 1462 aa3.99□□□□□ -1.77
CLOCK-201ENST00000309964 SMG6Q86US8 1419 aaKnown RBP3.98□□□□□ -1.77
CLOCK-201ENST00000309964 SF3B2Q13435 895 aaKnown RBP3.98□□□□□ -1.77
CLOCK-201ENST00000309964 FYCO1Q9BQS8 1478 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 NLRP13Q86W25 1043 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 RWDD1Q9H446 243 aaPredicted RBP3.98□□□□□ -1.77
CLOCK-201ENST00000309964 PPP6R1Q9UPN7 881 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 ATP6V1DQ9Y5K8 247 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 DAPK1P53355 1430 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 CFTRP13569 1480 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 TEFQ10587 303 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 COG3Q96JB2 828 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 TTC5Q8N0Z6 440 aa3.98□□□□□ -1.77
CLOCK-201ENST00000309964 MAGI1Q96QZ7 1491 aaPredicted RBP3.97□□□□□ -1.77
CLOCK-201ENST00000309964 FRAT2O75474 233 aaPredicted RBP3.97□□□□□ -1.77
CLOCK-201ENST00000309964 GPRASP1Q5JY77 1395 aa3.97□□□□□ -1.77
CLOCK-201ENST00000309964 PHF14O94880 888 aa3.97□□□□□ -1.77
CLOCK-201ENST00000309964 MEX3CQ5U5Q3 659 aaKnown RBP3.97□□□□□ -1.77
CLOCK-201ENST00000309964 HSCBQ8IWL3 235 aa3.97□□□□□ -1.77
CLOCK-201ENST00000309964 ARHGAP5Q13017 1502 aa3.97□□□□□ -1.77
CLOCK-201ENST00000309964 FAM69CQ0P6D2 419 aa3.97□□□□□ -1.77
CLOCK-201ENST00000309964 CCDC7Q96M83 1385 aa3.97□□□□□ -1.77
CLOCK-201ENST00000309964 HFM1A2PYH4 1435 aa3.97□□□□□ -1.77
CLOCK-201ENST00000309964 U2AF1L5P0DN76 240 aaPredicted RBP3.97□□□□□ -1.77
CLOCK-201ENST00000309964 U2AF1Q01081 240 aaKnown RBP eCLIP3.97□□□□□ -1.77
CLOCK-201ENST00000309964 HSP90AB1P08238 724 aaKnown RBP3.97□□□□□ -1.77
CLOCK-201ENST00000309964 CEP89Q96ST8 783 aa3.96□□□□□ -1.77
CLOCK-201ENST00000309964 ZNF692Q9BU19 519 aaPredicted RBP3.96□□□□□ -1.77
CLOCK-201ENST00000309964 TOP2BQ02880 1626 aa3.96□□□□□ -1.77
CLOCK-201ENST00000309964 FHOD3Q2V2M9 1422 aa3.96□□□□□ -1.77
CLOCK-201ENST00000309964 KIF15Q9NS87 1388 aa3.96□□□□□ -1.78
CLOCK-201ENST00000309964 ITSN2Q9NZM3 1697 aa3.96□□□□□ -1.78
CLOCK-201ENST00000309964 HSP90AB4PQ58FF6 505 aa3.96□□□□□ -1.78
CLOCK-201ENST00000309964 TRIM34Q9BYJ4 488 aa3.96□□□□□ -1.78
CLOCK-201ENST00000309964 TCEAL9Q9UHQ7 104 aa3.96□□□□□ -1.78
CLOCK-201ENST00000309964 PTMAP06454 111 aaKnown RBP3.96□□□□□ -1.78
CLOCK-201ENST00000309964 WDHD1O75717 1129 aaPredicted RBP3.96□□□□□ -1.78
CLOCK-201ENST00000309964 STK26Q9P289 416 aa3.96□□□□□ -1.78
CLOCK-201ENST00000309964 PDIA4P13667 645 aaKnown RBP3.96□□□□□ -1.78
CLOCK-201ENST00000309964 FRAT1Q92837 279 aaPredicted RBP3.96□□□□□ -1.78
CLOCK-201ENST00000309964 EHBP1L1Q8N3D4 1523 aa3.96□□□□□ -1.78
CLOCK-201ENST00000309964 PPP4R2Q9NY27 417 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 EPRSP07814 1512 aaKnown RBP3.95□□□□□ -1.78
CLOCK-201ENST00000309964 RUFY2Q8WXA3 655 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 GBP4Q96PP9 640 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 HOOK1Q9UJC3 728 aaKnown RBP3.95□□□□□ -1.78
CLOCK-201ENST00000309964 TCERG1O14776 1098 aaKnown RBP3.95□□□□□ -1.78
CLOCK-201ENST00000309964 NEUROD2Q15784 382 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 DNTTIP2Q5QJE6 756 aaKnown RBP3.95□□□□□ -1.78
CLOCK-201ENST00000309964 RAPGEF4Q8WZA2 1011 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 KIF14Q15058 1648 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 SYNE3Q6ZMZ3 975 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 KIF21AQ7Z4S6 1674 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 NCOA2Q15596 1464 aa3.95□□□□□ -1.78
CLOCK-201ENST00000309964 PLEKHG5O94827 1062 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 HNRNPMP52272 730 aaKnown RBP eCLIP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 ST18O60284 1047 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 AKAP17AQ02040 695 aaKnown RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 MFAP1P55081 439 aaKnown RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 WDR97A6NE52 1622 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 TPM2P07951 284 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 RNF20Q5VTR2 975 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 ISY1Q9ULR0 285 aaKnown RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 CTDP1Q9Y5B0 961 aaPredicted RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 TSR1Q2NL82 804 aaKnown RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 CCDC47Q96A33 483 aaKnown RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 NAP1L2Q9ULW6 460 aaPredicted RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 IQGAP2Q13576 1575 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 CC2D1BQ5T0F9 858 aaKnown RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 LRPPRCP42704 1394 aaKnown RBP3.94□□□□□ -1.78
CLOCK-201ENST00000309964 VPS37DQ86XT2 251 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 RPGRIP1LQ68CZ1 1315 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 KIF16BQ96L93 1317 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 TEX14Q8IWB6 1497 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 CASKIN1Q8WXD9 1431 aa3.94□□□□□ -1.78
CLOCK-201ENST00000309964 RAB3GAP2Q9H2M9 1393 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 IL27Q8NEV9 243 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 SNAPC4Q5SXM2 1469 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 TRDNQ13061 729 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 ANKRD30BQ9BXX2 1392 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 ANKLE2Q86XL3 938 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 PEG3Q9GZU2 1588 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 KRI1Q8N9T8 703 aaKnown RBP3.93□□□□□ -1.78
CLOCK-201ENST00000309964 CTTNBP2Q8WZ74 1663 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 TPM3P06753 285 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 ZNF428Q96B54 188 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 CHMP3Q9Y3E7 222 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms