RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
CGGBP1-201ENST00000309534 SLC24A1O60721 1099 aa21.49■■□□□ 1.03
CGGBP1-201ENST00000309534 ROCK2O75116 1388 aaKnown RBP21.48■■□□□ 1.03
CGGBP1-201ENST00000309534 PELP1Q8IZL8 1130 aaKnown RBP21.47■■□□□ 1.03
CGGBP1-201ENST00000309534 FAM135AQ9P2D6 1515 aa21.47■■□□□ 1.03
CGGBP1-201ENST00000309534 KDM6BO15054 1643 aa21.47■■□□□ 1.03
CGGBP1-201ENST00000309534 PLXNC1O60486 1568 aa21.45■■□□□ 1.03
CGGBP1-201ENST00000309534 ABCA9Q8IUA7 1624 aa21.45■■□□□ 1.02
CGGBP1-201ENST00000309534 NEO1Q92859 1461 aa21.45■■□□□ 1.02
CGGBP1-201ENST00000309534 CDCA8Q53HL2 280 aa21.45■■□□□ 1.02
CGGBP1-201ENST00000309534 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
CGGBP1-201ENST00000309534 TEX14Q8IWB6 1497 aa21.43■■□□□ 1.02
CGGBP1-201ENST00000309534 KDM5DQ9BY66 1539 aa21.42■■□□□ 1.02
CGGBP1-201ENST00000309534 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
CGGBP1-201ENST00000309534 USP47Q96K76 1375 aa21.39■■□□□ 1.02
CGGBP1-201ENST00000309534 NEFLP07196 543 aa21.38■■□□□ 1.01
CGGBP1-201ENST00000309534 A2MP01023 1474 aa21.38■■□□□ 1.01
CGGBP1-201ENST00000309534 ARID4BQ4LE39 1312 aaPredicted RBP21.38■■□□□ 1.01
CGGBP1-201ENST00000309534 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
CGGBP1-201ENST00000309534 ARHGEF12Q9NZN5 1544 aa21.36■■□□□ 1.01
CGGBP1-201ENST00000309534 POGZQ7Z3K3 1410 aa21.36■■□□□ 1.01
CGGBP1-201ENST00000309534 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
CGGBP1-201ENST00000309534 TMF1P82094 1093 aa21.35■■□□□ 1.01
CGGBP1-201ENST00000309534 EIF3AQ14152 1382 aaKnown RBP21.34■■□□□ 1.01
CGGBP1-201ENST00000309534 CNGB1Q14028 1251 aaPredicted RBP21.33■■□□□ 1
CGGBP1-201ENST00000309534 TRHP20396 242 aaPredicted RBP21.31■■□□□ 1
CGGBP1-201ENST00000309534 ZFYVE16Q7Z3T8 1539 aa21.31■■□□□ 1
CGGBP1-201ENST00000309534 CCDC7Q96M83 1385 aa21.28■■□□□ 1
CGGBP1-201ENST00000309534 UNC13BO14795 1591 aa21.28■■□□□ 1
CGGBP1-201ENST00000309534 MLH3Q9UHC1 1453 aa21.27■■□□□ 1
CGGBP1-201ENST00000309534 HDGFP51858 240 aaKnown RBP21.26■□□□□ 0.99
CGGBP1-201ENST00000309534 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
CGGBP1-201ENST00000309534 MLECQ14165 292 aa21.24■□□□□ 0.99
CGGBP1-201ENST00000309534 ST20-MTHFSA0A0A6YYL1 179 aa21.24■□□□□ 0.99
CGGBP1-201ENST00000309534 IQGAP3Q86VI3 1631 aa21.24■□□□□ 0.99
CGGBP1-201ENST00000309534 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
CGGBP1-201ENST00000309534 BCANQ96GW7 911 aa21.23■□□□□ 0.99
CGGBP1-201ENST00000309534 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
CGGBP1-201ENST00000309534 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
CGGBP1-201ENST00000309534 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
CGGBP1-201ENST00000309534 RALGAPBQ86X10 1494 aa21.22■□□□□ 0.99
CGGBP1-201ENST00000309534 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
CGGBP1-201ENST00000309534 UHRF1BP1Q6BDS2 1440 aa21.22■□□□□ 0.99
CGGBP1-201ENST00000309534 CNTLNQ9NXG0 1405 aa21.21■□□□□ 0.99
CGGBP1-201ENST00000309534 RPGRIP1LQ68CZ1 1315 aa21.21■□□□□ 0.99
CGGBP1-201ENST00000309534 HECW2Q9P2P5 1572 aa21.21■□□□□ 0.99
CGGBP1-201ENST00000309534 WASHC2AQ641Q2 1341 aa21.2■□□□□ 0.98
CGGBP1-201ENST00000309534 SLC52A1Q9NWF4 448 aa21.2■□□□□ 0.98
CGGBP1-201ENST00000309534 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
CGGBP1-201ENST00000309534 TMC1Q8TDI8 760 aa21.19■□□□□ 0.98
CGGBP1-201ENST00000309534 EIF2AK4Q9P2K8 1649 aaKnown RBP21.17■□□□□ 0.98
CGGBP1-201ENST00000309534 INO80Q9ULG1 1556 aaPredicted RBP21.16■□□□□ 0.98
CGGBP1-201ENST00000309534 ATP10AO60312 1499 aa21.15■□□□□ 0.98
CGGBP1-201ENST00000309534 KNSTRNQ9Y448 316 aa21.15■□□□□ 0.98
CGGBP1-201ENST00000309534 GLI2P10070 1586 aa21.15■□□□□ 0.98
CGGBP1-201ENST00000309534 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
CGGBP1-201ENST00000309534 MAGI2Q86UL8 1455 aa21.14■□□□□ 0.97
CGGBP1-201ENST00000309534 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.97
CGGBP1-201ENST00000309534 PRAG1Q86YV5 1406 aa21.13■□□□□ 0.97
CGGBP1-201ENST00000309534 RALBP1Q15311 655 aa21.12■□□□□ 0.97
CGGBP1-201ENST00000309534 TET3O43151 1660 aa21.11■□□□□ 0.97
CGGBP1-201ENST00000309534 FAM9BQ8IZU0 186 aa21.11■□□□□ 0.97
CGGBP1-201ENST00000309534 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
CGGBP1-201ENST00000309534 TRPM2O94759 1503 aa21.08■□□□□ 0.97
CGGBP1-201ENST00000309534 NBPF1Q3BBV0 1214 aa21.08■□□□□ 0.96
CGGBP1-201ENST00000309534 PRKRIP1Q9H875 184 aaPredicted RBP21.06■□□□□ 0.96
CGGBP1-201ENST00000309534 PTPRTO14522 1441 aa21.06■□□□□ 0.96
CGGBP1-201ENST00000309534 POGKQ9P215 609 aa21.06■□□□□ 0.96
CGGBP1-201ENST00000309534 KDM5CP41229 1560 aa21.05■□□□□ 0.96
CGGBP1-201ENST00000309534 PRDM15P57071 1507 aaPredicted RBP21.04■□□□□ 0.96
CGGBP1-201ENST00000309534 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.96
CGGBP1-201ENST00000309534 PLA2R1Q13018 1463 aa21.01■□□□□ 0.95
CGGBP1-201ENST00000309534 CFAP70Q5T0N1 1121 aa21■□□□□ 0.95
CGGBP1-201ENST00000309534 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
CGGBP1-201ENST00000309534 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
CGGBP1-201ENST00000309534 LMTK2Q8IWU2 1503 aa20.99■□□□□ 0.95
CGGBP1-201ENST00000309534 SCAF11Q99590 1463 aaKnown RBP20.99■□□□□ 0.95
CGGBP1-201ENST00000309534 KIDINS220Q9ULH0 1771 aa20.99■□□□□ 0.95
CGGBP1-201ENST00000309534 CENPJQ9HC77 1338 aaPredicted RBP20.99■□□□□ 0.95
CGGBP1-201ENST00000309534 GPRASP1Q5JY77 1395 aa20.98■□□□□ 0.95
CGGBP1-201ENST00000309534 YEATS2Q9ULM3 1422 aa20.97■□□□□ 0.95
CGGBP1-201ENST00000309534 TRAK1Q9UPV9 953 aa20.97■□□□□ 0.95
CGGBP1-201ENST00000309534 DIP2BQ9P265 1576 aa20.97■□□□□ 0.95
CGGBP1-201ENST00000309534 SPATA31E1Q6ZUB1 1445 aa20.96■□□□□ 0.95
CGGBP1-201ENST00000309534 MAP3K4Q9Y6R4 1608 aa20.96■□□□□ 0.95
CGGBP1-201ENST00000309534 WDR43Q15061 677 aaKnown RBP eCLIP20.96■□□□□ 0.95
CGGBP1-201ENST00000309534 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.94
CGGBP1-201ENST00000309534 SPHKAPQ2M3C7 1700 aa20.95■□□□□ 0.94
CGGBP1-201ENST00000309534 NPATQ14207 1427 aa20.95■□□□□ 0.94
CGGBP1-201ENST00000309534 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
CGGBP1-201ENST00000309534 NOS1P29475 1434 aa20.94■□□□□ 0.94
CGGBP1-201ENST00000309534 DEPDC5O75140 1603 aa20.94■□□□□ 0.94
CGGBP1-201ENST00000309534 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
CGGBP1-201ENST00000309534 EID1Q9Y6B2 187 aa20.94■□□□□ 0.94
CGGBP1-201ENST00000309534 NUTM2DQ5VT03 806 aaPredicted RBP20.93■□□□□ 0.94
CGGBP1-201ENST00000309534 PANK3Q9H999 370 aa20.93■□□□□ 0.94
CGGBP1-201ENST00000309534 EVC2Q86UK5 1308 aa20.93■□□□□ 0.94
CGGBP1-201ENST00000309534 CC2D1BQ5T0F9 858 aaKnown RBP20.93■□□□□ 0.94
CGGBP1-201ENST00000309534 NLRP13Q86W25 1043 aa20.93■□□□□ 0.94
CGGBP1-201ENST00000309534 IDI1Q13907 227 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms