RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 NAIPQ13075 1403 aa11.02□□□□□ -0.65
SNRPD1-201ENST00000300413 STK26Q9P289 416 aa11.02□□□□□ -0.65
SNRPD1-201ENST00000300413 UHRF1BP1LA0JNW5 1464 aa11.01□□□□□ -0.65
SNRPD1-201ENST00000300413 KTN1Q86UP2 1357 aaKnown RBP11.01□□□□□ -0.65
SNRPD1-201ENST00000300413 CCER2I3L3R5 266 aa11.01□□□□□ -0.65
SNRPD1-201ENST00000300413 RALBP1Q15311 655 aa11.01□□□□□ -0.65
SNRPD1-201ENST00000300413 SENP3Q9H4L4 574 aaPredicted RBP11□□□□□ -0.65
SNRPD1-201ENST00000300413 RAPGEF3O95398 923 aa10.99□□□□□ -0.65
SNRPD1-201ENST00000300413 ZNF518AQ6AHZ1 1483 aa10.99□□□□□ -0.65
SNRPD1-201ENST00000300413 NCOA1Q15788 1441 aa10.99□□□□□ -0.65
SNRPD1-201ENST00000300413 MAPK8IP3Q9UPT6 1336 aa10.99□□□□□ -0.65
SNRPD1-201ENST00000300413 EVC2Q86UK5 1308 aa10.99□□□□□ -0.65
SNRPD1-201ENST00000300413 TCOF1Q13428 1488 aaKnown RBP10.99□□□□□ -0.65
SNRPD1-201ENST00000300413 MORC1Q86VD1 984 aa10.98□□□□□ -0.65
SNRPD1-201ENST00000300413 ANKRD30BQ9BXX2 1392 aa10.98□□□□□ -0.65
SNRPD1-201ENST00000300413 DHX29Q7Z478 1369 aaKnown RBP10.98□□□□□ -0.65
SNRPD1-201ENST00000300413 THEMISQ8N1K5 641 aaPredicted RBP10.98□□□□□ -0.65
SNRPD1-201ENST00000300413 SHANK2Q9UPX8 1470 aa10.98□□□□□ -0.65
SNRPD1-201ENST00000300413 ABCC10Q5T3U5 1492 aa10.97□□□□□ -0.65
SNRPD1-201ENST00000300413 MIER1Q8N108 512 aa10.97□□□□□ -0.65
SNRPD1-201ENST00000300413 ERBINQ96RT1 1412 aa10.96□□□□□ -0.65
SNRPD1-201ENST00000300413 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.66
SNRPD1-201ENST00000300413 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.66
SNRPD1-201ENST00000300413 USP47Q96K76 1375 aa10.96□□□□□ -0.66
SNRPD1-201ENST00000300413 SAFB2Q14151 953 aaKnown RBP eCLIP10.94□□□□□ -0.66
SNRPD1-201ENST00000300413 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
SNRPD1-201ENST00000300413 NPM2Q86SE8 214 aaKnown RBP10.94□□□□□ -0.66
SNRPD1-201ENST00000300413 ZBTB7CA1YPR0 619 aa10.93□□□□□ -0.66
SNRPD1-201ENST00000300413 TRAK1Q9UPV9 953 aa10.93□□□□□ -0.66
SNRPD1-201ENST00000300413 CENPJQ9HC77 1338 aaPredicted RBP10.92□□□□□ -0.66
SNRPD1-201ENST00000300413 CHD1O14646 1710 aa10.92□□□□□ -0.66
SNRPD1-201ENST00000300413 ABCA8O94911 1581 aa10.92□□□□□ -0.66
SNRPD1-201ENST00000300413 PPM1GO15355 546 aaPredicted RBP10.92□□□□□ -0.66
SNRPD1-201ENST00000300413 CFAP74Q9C0B2 1584 aa10.92□□□□□ -0.66
SNRPD1-201ENST00000300413 CC2D1BQ5T0F9 858 aaKnown RBP10.92□□□□□ -0.66
SNRPD1-201ENST00000300413 NEO1Q92859 1461 aa10.92□□□□□ -0.66
SNRPD1-201ENST00000300413 ST20-MTHFSA0A0A6YYL1 179 aa10.91□□□□□ -0.66
SNRPD1-201ENST00000300413 NGDNQ8NEJ9 315 aaKnown RBP10.9□□□□□ -0.66
SNRPD1-201ENST00000300413 CHMP4AQ9BY43 222 aa10.9□□□□□ -0.66
SNRPD1-201ENST00000300413 A2MP01023 1474 aa10.9□□□□□ -0.66
SNRPD1-201ENST00000300413 KDM5BQ9UGL1 1544 aa10.9□□□□□ -0.66
SNRPD1-201ENST00000300413 CALD1Q05682 793 aaKnown RBP10.9□□□□□ -0.67
SNRPD1-201ENST00000300413 SYCP2Q9BX26 1530 aa10.9□□□□□ -0.67
SNRPD1-201ENST00000300413 CHMP4BQ9H444 224 aaKnown RBP10.89□□□□□ -0.67
SNRPD1-201ENST00000300413 MS4A1P11836 297 aa10.88□□□□□ -0.67
SNRPD1-201ENST00000300413 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
SNRPD1-201ENST00000300413 CGNL1Q0VF96 1302 aa10.88□□□□□ -0.67
SNRPD1-201ENST00000300413 TXNDC2Q86VQ3 553 aa10.88□□□□□ -0.67
SNRPD1-201ENST00000300413 NLRP13Q86W25 1043 aa10.88□□□□□ -0.67
SNRPD1-201ENST00000300413 ANKLE2Q86XL3 938 aa10.87□□□□□ -0.67
SNRPD1-201ENST00000300413 U2SURPO15042 1029 aaKnown RBP10.87□□□□□ -0.67
SNRPD1-201ENST00000300413 SALL2Q9Y467 1007 aaPredicted RBP10.87□□□□□ -0.67
SNRPD1-201ENST00000300413 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
SNRPD1-201ENST00000300413 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
SNRPD1-201ENST00000300413 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
SNRPD1-201ENST00000300413 ADGRL2O95490 1459 aa10.85□□□□□ -0.67
SNRPD1-201ENST00000300413 DNMT1P26358 1616 aaKnown RBP10.84□□□□□ -0.67
SNRPD1-201ENST00000300413 MAPKBP1O60336 1514 aa10.84□□□□□ -0.67
SNRPD1-201ENST00000300413 CNTLNQ9NXG0 1405 aa10.84□□□□□ -0.67
SNRPD1-201ENST00000300413 FAM135AQ9P2D6 1515 aa10.84□□□□□ -0.67
SNRPD1-201ENST00000300413 TNNT2P45379 298 aaPredicted RBP10.84□□□□□ -0.67
SNRPD1-201ENST00000300413 NGEFQ8N5V2 710 aa10.83□□□□□ -0.68
SNRPD1-201ENST00000300413 MYBBP1AQ9BQG0 1328 aaKnown RBP10.83□□□□□ -0.68
SNRPD1-201ENST00000300413 WASHC2AQ641Q2 1341 aa10.83□□□□□ -0.68
SNRPD1-201ENST00000300413 TRAPPC8Q9Y2L5 1435 aa10.83□□□□□ -0.68
SNRPD1-201ENST00000300413 LMOD3Q0VAK6 560 aa10.82□□□□□ -0.68
SNRPD1-201ENST00000300413 COG3Q96JB2 828 aa10.82□□□□□ -0.68
SNRPD1-201ENST00000300413 ARHGEF5Q12774 1597 aa10.82□□□□□ -0.68
SNRPD1-201ENST00000300413 MINK1Q8N4C8 1332 aaPredicted RBP10.82□□□□□ -0.68
SNRPD1-201ENST00000300413 ATF3P18847 181 aa10.82□□□□□ -0.68
SNRPD1-201ENST00000300413 RTF1Q92541 710 aaKnown RBP10.81□□□□□ -0.68
SNRPD1-201ENST00000300413 PANK3Q9H999 370 aa10.81□□□□□ -0.68
SNRPD1-201ENST00000300413 CCDC7Q96M83 1385 aa10.8□□□□□ -0.68
SNRPD1-201ENST00000300413 ATP10AO60312 1499 aa10.8□□□□□ -0.68
SNRPD1-201ENST00000300413 RPRD2Q5VT52 1461 aaKnown RBP10.8□□□□□ -0.68
SNRPD1-201ENST00000300413 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
SNRPD1-201ENST00000300413 CFAP70Q5T0N1 1121 aa10.8□□□□□ -0.68
SNRPD1-201ENST00000300413 ATP7AQ04656 1500 aa10.79□□□□□ -0.68
SNRPD1-201ENST00000300413 MYO5CQ9NQX4 1742 aa10.79□□□□□ -0.68
SNRPD1-201ENST00000300413 TNRQ92752 1358 aa10.79□□□□□ -0.68
SNRPD1-201ENST00000300413 EIF5BO60841 1220 aaKnown RBP10.79□□□□□ -0.68
SNRPD1-201ENST00000300413 ARAP3Q8WWN8 1544 aa10.79□□□□□ -0.68
SNRPD1-201ENST00000300413 FKBP8Q14318 412 aa10.79□□□□□ -0.68
SNRPD1-201ENST00000300413 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
SNRPD1-201ENST00000300413 AMPHP49418 695 aa10.79□□□□□ -0.68
SNRPD1-201ENST00000300413 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
SNRPD1-201ENST00000300413 U2AF1L5P0DN76 240 aaPredicted RBP10.78□□□□□ -0.68
SNRPD1-201ENST00000300413 U2AF1Q01081 240 aaKnown RBP eCLIP10.78□□□□□ -0.684e-7■□□□□ 8.9
SNRPD1-201ENST00000300413 MAGI2Q86UL8 1455 aa10.78□□□□□ -0.68
SNRPD1-201ENST00000300413 CSB-PGBD3P0DP91 1061 aa10.78□□□□□ -0.68
SNRPD1-201ENST00000300413 PDE3BQ13370 1112 aa10.78□□□□□ -0.68
SNRPD1-201ENST00000300413 CCDC136Q96JN2 1154 aa10.78□□□□□ -0.68
SNRPD1-201ENST00000300413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.77□□□□□ -0.681e-17■□□□□ 8.5
SNRPD1-201ENST00000300413 A0A0G2JS52 829 aa10.77□□□□□ -0.69
SNRPD1-201ENST00000300413 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
SNRPD1-201ENST00000300413 GPRASP1Q5JY77 1395 aa10.77□□□□□ -0.69
SNRPD1-201ENST00000300413 DMRT2Q9Y5R5 561 aa10.76□□□□□ -0.69
SNRPD1-201ENST00000300413 UPF2Q9HAU5 1272 aaKnown RBP10.76□□□□□ -0.69
SNRPD1-201ENST00000300413 ZCCHC11Q5TAX3 1644 aaKnown RBP10.76□□□□□ -0.69
SNRPD1-201ENST00000300413 PTPRKQ15262 1439 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms