RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 HIRIP3Q9BW71 556 aaPredicted RBP5.4□□□□□ -1.54
RAPGEF6-201ENST00000296859 MTMR7Q9Y216 660 aa5.4□□□□□ -1.54
RAPGEF6-201ENST00000296859 TTC5Q8N0Z6 440 aa5.4□□□□□ -1.55
RAPGEF6-201ENST00000296859 PIAS4Q8N2W9 510 aaPredicted RBP5.4□□□□□ -1.55
RAPGEF6-201ENST00000296859 SPAG9O60271 1321 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 MCCP23508 829 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 STK31Q9BXU1 1019 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 FYB1O15117 783 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 C1orf141Q5JVX7 400 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 STAC3Q96MF2 364 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 AKAP17AQ02040 695 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 CCDC34Q96HJ3 373 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 BEGAINQ9BUH8 593 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 CC2D1BQ5T0F9 858 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 CARD11Q9BXL7 1154 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 CHMP4BQ9H444 224 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 TCERG1O14776 1098 aaKnown RBP5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 WDR78Q5VTH9 848 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 HSP90AB1P08238 724 aaKnown RBP5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 RBM5P52756 815 aaKnown RBP eCLIP5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 MORC1Q86VD1 984 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 CRBNQ96SW2 442 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 STRN4Q9NRL3 753 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 CLEC11AQ9Y240 323 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 PSME1Q06323 249 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 ZNF710Q8N1W2 664 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 IRX6P78412 446 aaPredicted RBP5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 ZFYVE27Q5T4F4 411 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 SLC4A10Q6U841 1118 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 ODF2Q5BJF6 829 aa5.37□□□□□ -1.55
RAPGEF6-201ENST00000296859 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.37□□□□□ -1.55
RAPGEF6-201ENST00000296859 IL27Q8NEV9 243 aa5.37□□□□□ -1.55
RAPGEF6-201ENST00000296859 MPHOSPH10O00566 681 aaKnown RBP5.37□□□□□ -1.55
RAPGEF6-201ENST00000296859 RGS3P49796 1198 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 PDE3BQ13370 1112 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 GPATCH3Q96I76 525 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 CT47A1Q5JQC4 288 aaPredicted RBP5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 PODXL2Q9NZ53 605 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 ECM2O94769 699 aaPredicted RBP5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 APPP05067 770 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.36□□□□□ -1.551e-6■■■■□ 23
RAPGEF6-201ENST00000296859 CCDC27Q2M243 656 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 ATP2B2Q01814 1243 aa5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 PATL2C9JE40 543 aaKnown RBP5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 TPD52L1Q16890 204 aaPredicted RBP5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 BIN2Q9UBW5 565 aaPredicted RBP5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 CHMP4AQ9BY43 222 aa5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 TRIM6-TRIM34B2RNG4 842 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 KCNA4P22459 653 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 NOP2P46087 812 aaKnown RBP5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 GLIPR1L2Q4G1C9 344 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 FOXD4L1Q9NU39 408 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 ZNF219Q9P2Y4 722 aaPredicted RBP5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 TTC16Q8NEE8 873 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 VTI1AQ96AJ9 217 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 TEFQ10587 303 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 EP400NLQ6ZTU2 488 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 RBM42Q9BTD8 480 aaKnown RBP5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 WASHC2CQ9Y4E1 1318 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 TPM4P67936 248 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 RSPH4AQ5TD94 716 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 SYNE3Q6ZMZ3 975 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 NLRP2Q9NX02 1062 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 PLIN1O60240 522 aa5.34□□□□□ -1.56
RAPGEF6-201ENST00000296859 CBX1P83916 185 aa5.34□□□□□ -1.56
RAPGEF6-201ENST00000296859 FAM69CQ0P6D2 419 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 WWC3Q9ULE0 1092 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 HDAC5Q9UQL6 1122 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 NOL8Q76FK4 1167 aaKnown RBP5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 PCMTD1Q96MG8 357 aaPredicted RBP5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 SCLT1Q96NL6 688 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 TPM3P06753 285 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 KIF3BO15066 747 aa5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 U2AF1L5P0DN76 240 aaPredicted RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 MS4A1P11836 297 aa5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 U2AF1Q01081 240 aaKnown RBP eCLIP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 ZSCAN29Q8IWY8 852 aaPredicted RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 EIF2S2P20042 333 aaKnown RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 NEBLO76041 1014 aa5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 SF3A1Q15459 793 aaKnown RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 PROSER2Q86WR7 435 aaPredicted RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 ZMYND15Q9H091 742 aa5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 HTATSF1O43719 755 aaKnown RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 RAPGEF4Q8WZA2 1011 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 BCL11BQ9C0K0 894 aaPredicted RBP5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 CFAP54Q96N23 3096 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 NEXNQ0ZGT2 675 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 DCAF11Q8TEB1 546 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 TPM2P07951 284 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 OSCARQ8IYS5 282 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 NUTM2GQ5VZR2 741 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 EYSQ5T1H1 3165 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 UQCRHP07919 91 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 DRC1Q96MC2 740 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 SMC4Q9NTJ3 1288 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 TSR1Q2NL82 804 aaKnown RBP5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 TMF1P82094 1093 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 BICDL1Q6ZP65 573 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 ADAMTS2O95450 1211 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms